Clone Name | rbastl18d10 |
---|---|
Clone Library Name | barley_pub |
>gb|AC019216.9|AC019216 Homo sapiens BAC clone RP11-484N11 from 4, complete sequence Length = 160858 Score = 44.1 bits (22), Expect = 0.23 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 catcaaagaaaattacgagatcttgt 27 |||||||||||||||| ||||||||| Sbjct: 100333 catcaaagaaaattacaagatcttgt 100358
>gb|AC163661.4| Mus musculus BAC clone RP23-288B18 from chromosome 10, complete sequence Length = 210846 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gcagcgcacggacacacaca 64 |||||||||||||||||||| Sbjct: 122024 gcagcgcacggacacacaca 122005
>gb|AC115898.22| Mus musculus chromosome 7, clone RP24-444C13, complete sequence Length = 177754 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cacggacacacacatacacg 70 |||||||||||||||||||| Sbjct: 9162 cacggacacacacatacacg 9143
>gb|BC060240.1| Mus musculus cDNA sequence AK122525, mRNA (cDNA clone MGC:77961 IMAGE:6856073), complete cds Length = 5915 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 gcagcgcacggacacacaca 64 |||||||||||||||||||| Sbjct: 38 gcagcgcacggacacacaca 57
>gb|AC113001.9| Mus musculus chromosome 7, clone RP23-184M4, complete sequence Length = 206940 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cacggacacacacatacacg 70 |||||||||||||||||||| Sbjct: 142739 cacggacacacacatacacg 142720
>gb|AC125077.4| Mus musculus BAC clone RP23-473K6 from chromosome 6, complete sequence Length = 184783 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcacggacacacacatacac 69 |||||||||||||||||||| Sbjct: 149124 gcacggacacacacatacac 149143
>gb|AC121926.3| Mus musculus BAC clone RP24-202B3 from chromosome 10, complete sequence Length = 185398 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gcagcgcacggacacacaca 64 |||||||||||||||||||| Sbjct: 47775 gcagcgcacggacacacaca 47756
>emb|AL355586.27| Human DNA sequence from clone RP11-59I9 on chromosome 6q16.3-21 Contains two novel genes, the 3' end of the C6orf210 gene for chromosome 6 open reading frame 210 and three CpG islands, complete sequence Length = 185311 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gcagcgcacggacacacaca 64 |||||||||||||||||||| Sbjct: 124224 gcagcgcacggacacacaca 124205
>ref|NM_199028.1| Mus musculus cDNA sequence AK122525 (AK122525), mRNA Length = 5915 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 gcagcgcacggacacacaca 64 |||||||||||||||||||| Sbjct: 38 gcagcgcacggacacacaca 57
>emb|AL731711.11| Mouse DNA sequence from clone RP23-55A17 on chromosome X, complete sequence Length = 209999 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gcacggacacacacatacac 69 |||||||||||||||||||| Sbjct: 127305 gcacggacacacacatacac 127286 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,057,167 Number of Sequences: 3902068 Number of extensions: 3057167 Number of successful extensions: 199639 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 199605 Number of HSP's gapped (non-prelim): 34 length of query: 276 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 254 effective length of database: 17,147,199,772 effective search space: 4355388742088 effective search space used: 4355388742088 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)