>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10,
             complete sequence
          Length = 153366

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 46/53 (86%), Gaps = 3/53 (5%)
 Strand = Plus / Minus

                                                                  
Query: 374   gcttgttccctgttgagaaacccccttcagcgatcttagcttggatgcagaag 426
             ||||||||| || |||||||||   ||||| ||||||||||||||||| ||||
Sbjct: 62755 gcttgttccttgctgagaaacc---ttcagtgatcttagcttggatgcggaag 62706

>gb|AY374122.1| Oryza sativa (japonica cultivar-group) SCC3 mRNA, complete cds
          Length = 3362

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 46/53 (86%), Gaps = 3/53 (5%)
 Strand = Plus / Minus

                                                                 
Query: 374  gcttgttccctgttgagaaacccccttcagcgatcttagcttggatgcagaag 426
            ||||||||| || |||||||||   ||||| ||||||||||||||||| ||||
Sbjct: 3013 gcttgttccttgctgagaaacc---ttcagtgatcttagcttggatgcggaag 2964

>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10,
             complete sequence
          Length = 102275

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 46/53 (86%), Gaps = 3/53 (5%)
 Strand = Plus / Minus

                                                                  
Query: 374   gcttgttccctgttgagaaacccccttcagcgatcttagcttggatgcagaag 426
             ||||||||| || |||||||||   ||||| ||||||||||||||||| ||||
Sbjct: 61595 gcttgttccttgctgagaaacc---ttcagtgatcttagcttggatgcggaag 61546

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 46/53 (86%), Gaps = 3/53 (5%)
 Strand = Plus / Minus

                                                                    
Query: 374     gcttgttccctgttgagaaacccccttcagcgatcttagcttggatgcagaag 426
               ||||||||| || |||||||||   ||||| ||||||||||||||||| ||||
Sbjct: 5376081 gcttgttccttgctgagaaacc---ttcagtgatcttagcttggatgcggaag 5376032

>dbj|AK069089.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008B14, full
            insert sequence
          Length = 3756

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 46/53 (86%), Gaps = 3/53 (5%)
 Strand = Plus / Minus

                                                                 
Query: 374  gcttgttccctgttgagaaacccccttcagcgatcttagcttggatgcagaag 426
            ||||||||| || |||||||||   ||||| ||||||||||||||||| ||||
Sbjct: 3354 gcttgttccttgctgagaaacc---ttcagtgatcttagcttggatgcggaag 3305

>gb|AC140286.3| Mus musculus BAC clone RP24-573E14 from chromosome 5, complete sequence
          Length = 164620

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 125   ggaagcacatggtagaagggg 145
             |||||||||||||||||||||
Sbjct: 18492 ggaagcacatggtagaagggg 18472

>dbj|AB182944.1| Triticum aestivum Wknox1b gene for KN1 homeobox protein, complete cds
          Length = 10847

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 38    gcacttccggagtacatatgt 58
             |||||||||||||||||||||
Sbjct: 10118 gcacttccggagtacatatgt 10098

>gb|AC007887.9|AC007887 Genomic sequence for Arabidopsis thaliana BAC F15O4 from chromosome I,
             complete sequence
          Length = 158096

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 184   attaaacaaaaacattcaaca 204
             |||||||||||||||||||||
Sbjct: 57295 attaaacaaaaacattcaaca 57315

>emb|BX294191.4| Zebrafish DNA sequence from clone DKEY-24K20 in linkage group 5, complete
              sequence
          Length = 185868

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 184    attaaacaaaaacattcaaca 204
              |||||||||||||||||||||
Sbjct: 179668 attaaacaaaaacattcaaca 179648

>gb|AC120412.12| Mus musculus chromosome 5, clone RP24-447P14, complete sequence
          Length = 149454

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 125   ggaagcacatggtagaagggg 145
             |||||||||||||||||||||
Sbjct: 36483 ggaagcacatggtagaagggg 36463

>gb|AC147241.2| Mus musculus BAC clone RP23-417C21 from chromosome 12, complete
             sequence
          Length = 199956

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    caaatagctcaaggcacttc 44
             ||||||||||||||||||||
Sbjct: 18859 caaatagctcaaggcacttc 18840

>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete
              genome
          Length = 686194

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     ttcattaccagcaaatagct 33
              ||||||||||||||||||||
Sbjct: 647282 ttcattaccagcaaatagct 647301

>gb|AC112146.3| Mus musculus BAC clone RP23-101G11 from 12, complete sequence
          Length = 188819

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     caaatagctcaaggcacttc 44
              ||||||||||||||||||||
Sbjct: 128759 caaatagctcaaggcacttc 128740

>gb|AC069286.7| Homo sapiens BAC clone RP11-261N10 from 7, complete sequence
          Length = 157118

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 328   ttcatcaactattgcttcctgaag 351
             ||||| ||||||||||||||||||
Sbjct: 60489 ttcataaactattgcttcctgaag 60466

>emb|AL359852.20| Human DNA sequence from clone RP11-299J5 on chromosome 6, complete
             sequence
          Length = 120512

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   gaagggggtgagcacctaag 158
             ||||||||||||||||||||
Sbjct: 92814 gaagggggtgagcacctaag 92833

>emb|AL031447.4|HS126A5 Human DNA sequence from clone RP1-126A5 on chromosome 1p36.21-36.33
             Contains the 3' end of the gene for a novel DnaJ
             domain-containing protein, the gene for a novel THAP
             domain-containing protein, the PHF13 gene for PHD finger
             protein 13, the gene for a novel protein (KIAA0469), the
             3' end of the HKR3 gene for GLI-Kruppel family member HKR3
             and two CpG islands, complete sequence
          Length = 112158

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    tcattcattaccagcaaata 30
             ||||||||||||||||||||
Sbjct: 47904 tcattcattaccagcaaata 47923

>gb|AC103853.2| Homo sapiens chromosome 8, clone RP11-642D21, complete sequence
          Length = 178736

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 373   tgcttgttccctgttgagaa 392
             ||||||||||||||||||||
Sbjct: 17739 tgcttgttccctgttgagaa 17758

>gb|AC080106.6| Homo sapiens chromosome 11, clone RP11-62J13, complete sequence
          Length = 157637

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 380    tccctgttgagaaacccccttcag 403
              ||||||||||||| ||||||||||
Sbjct: 140102 tccctgttgagaaccccccttcag 140125

>gb|AC020807.2| Mus musculus chromosome 18 clone RG-MBAC_225G20, complete sequence
          Length = 81195

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   aaacaaaaacattcaacagc 206
             ||||||||||||||||||||
Sbjct: 32689 aaacaaaaacattcaacagc 32708

>gb|AC090802.6| Homo sapiens chromosome 8, clone RP11-152P17, complete sequence
          Length = 162549

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 373  tgcttgttccctgttgagaa 392
            ||||||||||||||||||||
Sbjct: 3772 tgcttgttccctgttgagaa 3753

>gb|AC073343.6| Homo sapiens BAC clone RP11-611L7 from 7, complete sequence
          Length = 173967

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 123  ggggaagcacatggtagaag 142
            ||||||||||||||||||||
Sbjct: 4157 ggggaagcacatggtagaag 4138

>emb|BX571983.11| Zebrafish DNA sequence from clone DKEY-18M7 in linkage group 11,
            complete sequence
          Length = 248929

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 179  agacaattaaacaaaaacat 198
            ||||||||||||||||||||
Sbjct: 6681 agacaattaaacaaaaacat 6700

>gb|AC091750.1|AC091750 Mus musculus chromosome 18 clone unknown, complete sequence
          Length = 81195

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   aaacaaaaacattcaacagc 206
             ||||||||||||||||||||
Sbjct: 32689 aaacaaaaacattcaacagc 32708

>dbj|AK037009.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched
            library, clone:9930036K22 product:similar to SIGNAL
            RECOGNITION PARTICLE 19KD [Homo sapiens], full insert
            sequence
          Length = 3298

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 187  aaacaaaaacattcaacagc 206
            ||||||||||||||||||||
Sbjct: 2649 aaacaaaaacattcaacagc 2630

>gb|AC127464.3| Ornithorhynchus anatinus clone OA_Bb-383O11, complete sequence
          Length = 161148

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 349   aagccgtaggagcatttctc 368
             ||||||||||||||||||||
Sbjct: 94083 aagccgtaggagcatttctc 94064

>gb|AC098931.3| Homo sapiens chromosome 3 clone RP11-353I6, complete sequence
          Length = 179082

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 132    catggtagaagggggtgagcacct 155
              |||||||||||||||||| |||||
Sbjct: 159393 catggtagaagggggtgaccacct 159370

>gb|AC008905.6|AC008905 Homo sapiens chromosome 5 clone CTD-2259I14, complete sequence
          Length = 129430

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   acaattaaacaaaaacattc 200
             ||||||||||||||||||||
Sbjct: 42431 acaattaaacaaaaacattc 42450

>gb|AC008865.3|AC008865 Homo sapiens chromosome 5 clone CTD-2193I10, complete sequence
          Length = 191162

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   acaattaaacaaaaacattc 200
             ||||||||||||||||||||
Sbjct: 97118 acaattaaacaaaaacattc 97137

>gb|AE001438.3| Clostridium acetobutylicum ATCC 824 megaplasmid pSOL1, complete
             sequence
          Length = 192000

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 333   caactattgcttcctgaagc 352
             ||||||||||||||||||||
Sbjct: 77726 caactattgcttcctgaagc 77707

>emb|CR759833.23| Zebrafish DNA sequence from clone DKEYP-4F2 in linkage group 14,
             complete sequence
          Length = 157355

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   agacaattaaacaaaaacat 198
             ||||||||||||||||||||
Sbjct: 90123 agacaattaaacaaaaacat 90104

>gb|AC003685.1|AC003685 Homo sapiens Xp22 BAC GS-542M4 (Genome Systems Human BAC library)
              complete sequence
          Length = 181795

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 2      ggattaaactcattcattaccagc 25
              |||||||| |||||||||||||||
Sbjct: 118550 ggattaaaatcattcattaccagc 118527

>emb|CR938722.3| Pig DNA sequence from clone CH242-150C11 on chromosome 4, complete
              sequence
          Length = 177720

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 73     gccaaggaaatgaaacttcagccc 96
              |||||||| |||||||||||||||
Sbjct: 102344 gccaaggagatgaaacttcagccc 102321

>gb|AC090534.10| Mus musculus Strain C57BL6/J chromosome 18 BAC, RP23-233F17, complete
              sequence
          Length = 176773

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    aaacaaaaacattcaacagc 206
              ||||||||||||||||||||
Sbjct: 104891 aaacaaaaacattcaacagc 104910


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,835,405
Number of Sequences: 3902068
Number of extensions: 3835405
Number of successful extensions: 66419
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66331
Number of HSP's gapped (non-prelim): 88
length of query: 426
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 404
effective length of database: 17,147,199,772
effective search space: 6927468707888
effective search space used: 6927468707888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)