Clone Name | rbastl18d01 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | LATA_LATMA (P23631) Alpha-latrotoxin precursor (Alpha-LTX) | 30 | 2.2 | 2 | RK20_LOTJA (Q9BBR0) Chloroplast 50S ribosomal protein L20 | 28 | 8.5 |
---|
>LATA_LATMA (P23631) Alpha-latrotoxin precursor (Alpha-LTX)| Length = 1401 Score = 29.6 bits (65), Expect = 2.2 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +1 Query: 55 KVNSGAVQLHYQNFKGKGKALHMLVKGD 138 K NSGA LH FKGK +A +L+ + Sbjct: 792 KTNSGATPLHLATFKGKSQAALILLNNE 819
>RK20_LOTJA (Q9BBR0) Chloroplast 50S ribosomal protein L20| Length = 120 Score = 27.7 bits (60), Expect = 8.5 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +3 Query: 132 RGLTASFHPAGSGPNDKKKQLYF 200 RGL S AG G NDKKK +Y+ Sbjct: 57 RGLWISRINAGIGDNDKKKNIYY 79 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,096,372 Number of Sequences: 219361 Number of extensions: 442184 Number of successful extensions: 1008 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1001 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1008 length of database: 80,573,946 effective HSP length: 46 effective length of database: 70,483,340 effective search space used: 1691600160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)