ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl18c05 |
|---|---|
| Clone Library Name | barley_pub |
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 123 bits (309), Expect(2) = 8e-37 Identities = 61/66 (92%), Positives = 61/66 (92%), Gaps = 5/66 (7%) Frame = -3 Query: 247 EEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS-----DGDPTDEKMVMEMGI 83 EEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS DGDPTDEKMVMEMGI Sbjct: 871 EEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGI 930 Query: 82 PNSISI 65 PNSISI Sbjct: 931 PNSISI 936 Score = 48.1 bits (113), Expect(2) = 8e-37 Identities = 19/27 (70%), Positives = 22/27 (81%) Frame = -1 Query: 309 EYMGTHEEPAWTKDGVVNQALRSSRRA 229 EYMGTHEEPAWTKDGV+NQA + + Sbjct: 850 EYMGTHEEPAWTKDGVINQAFEEFKES 876
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 90.1 bits (222), Expect(2) = 7e-24 Identities = 41/59 (69%), Positives = 48/59 (81%) Frame = -3 Query: 241 FKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 65 F++ R I EQV+EWN D R+NRHGAG+VPYVLLRP +G+P D K VMEMGIPNSISI Sbjct: 874 FQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKTVMEMGIPNSISI 932 Score = 38.1 bits (87), Expect(2) = 7e-24 Identities = 14/22 (63%), Positives = 19/22 (86%) Frame = -1 Query: 309 EYMGTHEEPAWTKDGVVNQALR 244 EYMGTH+EPAW +DG V++A + Sbjct: 851 EYMGTHQEPAWQRDGEVDKAFQ 872
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 52.8 bits (125), Expect = 2e-07 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 4/75 (5%) Frame = -3 Query: 277 DKGWGGQPGI----EEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTD 110 D+ W P EF R+ E+++ N DP R+NR GAG++PY L+ PS G Sbjct: 830 DEAWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSGPG-- 887 Query: 109 EKMVMEMGIPNSISI 65 + G+PNS++I Sbjct: 888 ---ITCRGVPNSVTI 899
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 50.1 bits (118), Expect = 1e-06 Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 4/75 (5%) Frame = -3 Query: 277 DKGWGGQPGI----EEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTD 110 + W +P + E+F ++ +D NN+P+ KNR GAG+VPY LL+ P Sbjct: 827 EPAWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLK-----PFS 881 Query: 109 EKMVMEMGIPNSISI 65 E V GIPNSISI Sbjct: 882 EPGVTGRGIPNSISI 896
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 45.8 bits (107), Expect(2) = 8e-06 Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 5/73 (6%) Frame = -3 Query: 268 WGGQP-GIEEFKESTRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 101 W P +E FK + ++VE +V N+DP+ KNR+G PY+LL P+ D Sbjct: 790 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 849 Query: 100 -VMEMGIPNSISI 65 + GIPNSISI Sbjct: 850 GLTAKGIPNSISI 862 Score = 21.2 bits (43), Expect(2) = 8e-06 Identities = 6/13 (46%), Positives = 8/13 (61%) Frame = -1 Query: 306 YMGTHEEPAWTKD 268 Y+G + P WT D Sbjct: 781 YLGQRDTPEWTSD 793
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 41.6 bits (96), Expect(2) = 1e-05 Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 4/66 (6%) Frame = -3 Query: 250 IEEFKESTRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM-VMEMGI 83 +E F+ + ++VE +V N D KNR+G PY+LL P+ D T + GI Sbjct: 801 LEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGI 860 Query: 82 PNSISI 65 PNSISI Sbjct: 861 PNSISI 866 Score = 25.0 bits (53), Expect(2) = 1e-05 Identities = 9/21 (42%), Positives = 12/21 (57%) Frame = -1 Query: 306 YMGTHEEPAWTKDGVVNQALR 244 Y+G + PAWT D +A R Sbjct: 785 YLGQRDTPAWTSDARALEAFR 805
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 46.6 bits (109), Expect = 2e-05 Identities = 27/61 (44%), Positives = 35/61 (57%) Frame = -3 Query: 247 EEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSIS 68 E+F E ++I + +DE N+D KNR G +PY LL PS E V GIPNS+S Sbjct: 804 EKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPS-----SEGGVTGRGIPNSVS 858 Query: 67 I 65 I Sbjct: 859 I 859
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 44.3 bits (103), Expect(2) = 2e-05 Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 5/67 (7%) Frame = -3 Query: 250 IEEFKESTRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEK--MVMEMG 86 ++ FK ++V+ ++ + N + KNR+G +PY+LL P+ D T EK + MG Sbjct: 811 LDAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMG 870 Query: 85 IPNSISI 65 IPNSISI Sbjct: 871 IPNSISI 877 Score = 21.6 bits (44), Expect(2) = 2e-05 Identities = 7/21 (33%), Positives = 10/21 (47%) Frame = -1 Query: 306 YMGTHEEPAWTKDGVVNQALR 244 Y+G + P WT D A + Sbjct: 795 YLGQRDTPEWTSDAKALDAFK 815
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 42.7 bits (99), Expect(2) = 3e-05 Identities = 28/66 (42%), Positives = 34/66 (51%), Gaps = 4/66 (6%) Frame = -3 Query: 250 IEEFKESTRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGD-PTDEKMVMEMGI 83 +E FK ++ E +V N DP RKNR G PY LL P+ D D + GI Sbjct: 805 LEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGI 864 Query: 82 PNSISI 65 PNSISI Sbjct: 865 PNSISI 870 Score = 22.3 bits (46), Expect(2) = 3e-05 Identities = 7/21 (33%), Positives = 11/21 (52%) Frame = -1 Query: 306 YMGTHEEPAWTKDGVVNQALR 244 Y+G + P WT D +A + Sbjct: 789 YLGQRDTPEWTSDAKALEAFK 809
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 45.4 bits (106), Expect = 4e-05 Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 4/75 (5%) Frame = -3 Query: 277 DKGWGGQPGI----EEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTD 110 + W +P I E FK + + +DE N + KNR GAG+V Y LL+ PT Sbjct: 827 EASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLK-----PTS 881 Query: 109 EKMVMEMGIPNSISI 65 E V MG+P SISI Sbjct: 882 EHGVTGMGVPYSISI 896
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 43.9 bits (102), Expect = 1e-04 Identities = 26/59 (44%), Positives = 32/59 (54%) Frame = -3 Query: 241 FKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 65 F R+ E ++ N D RKNR GAG++PY LL PS V G+PNSISI Sbjct: 865 FAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPS-----SPPGVTCRGVPNSISI 918
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 42.0 bits (97), Expect(2) = 1e-04 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 3/65 (4%) Frame = -3 Query: 250 IEEFKESTRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIP 80 +E FK+ K+ E ++ + NND +NRHG +PY LL PS ++ + GIP Sbjct: 802 LEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPS-----SKEGLTFRGIP 856 Query: 79 NSISI 65 NSISI Sbjct: 857 NSISI 861 Score = 21.2 bits (43), Expect(2) = 1e-04 Identities = 6/13 (46%), Positives = 8/13 (61%) Frame = -1 Query: 306 YMGTHEEPAWTKD 268 Y+G + P WT D Sbjct: 786 YLGERDNPNWTSD 798
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 43.5 bits (101), Expect = 1e-04 Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 5/73 (6%) Frame = -3 Query: 268 WGGQP-GIEEFKESTRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTD-EK 104 W P +E FK +R++VE +V N DP KNR G PY L+ P+ D + Sbjct: 791 WTSDPKALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAE 850 Query: 103 MVMEMGIPNSISI 65 + GIPNSISI Sbjct: 851 GITARGIPNSISI 863
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 38.5 bits (88), Expect(2) = 3e-04 Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Frame = -3 Query: 247 EEFKESTRKIVEQVDEWNNDPDRK-NRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSI 71 ++F ++I E++ NNDP + NR G +PY LL PS E+ + GIPNSI Sbjct: 783 QKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSS-----EEGLTFRGIPNSI 837 Query: 70 SI 65 SI Sbjct: 838 SI 839 Score = 23.1 bits (48), Expect(2) = 3e-04 Identities = 8/21 (38%), Positives = 11/21 (52%) Frame = -1 Query: 306 YMGTHEEPAWTKDGVVNQALR 244 Y+G + P WT D QA + Sbjct: 763 YLGQRDNPHWTSDSKALQAFQ 783
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 38.1 bits (87), Expect(2) = 4e-04 Identities = 23/61 (37%), Positives = 31/61 (50%) Frame = -3 Query: 247 EEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSIS 68 ++F ++I E++ NND NR G +PY LL P+ T GIPNSIS Sbjct: 811 QKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPNSEGLTCR------GIPNSIS 864 Query: 67 I 65 I Sbjct: 865 I 865 Score = 23.1 bits (48), Expect(2) = 4e-04 Identities = 8/21 (38%), Positives = 11/21 (52%) Frame = -1 Query: 306 YMGTHEEPAWTKDGVVNQALR 244 Y+G + P WT D QA + Sbjct: 791 YLGQRDNPHWTSDSKALQAFQ 811
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 36.6 bits (83), Expect(2) = 5e-04 Identities = 22/61 (36%), Positives = 32/61 (52%) Frame = -3 Query: 247 EEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSIS 68 ++F +I ++ NNDP +R G +PY LL PS ++ + GIPNSIS Sbjct: 809 QKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPS-----SKEGLTFRGIPNSIS 863 Query: 67 I 65 I Sbjct: 864 I 864 Score = 24.3 bits (51), Expect(2) = 5e-04 Identities = 9/21 (42%), Positives = 11/21 (52%) Frame = -1 Query: 306 YMGTHEEPAWTKDGVVNQALR 244 Y+G E P WT D QA + Sbjct: 789 YLGQRENPHWTSDSKALQAFQ 809
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 41.6 bits (96), Expect = 5e-04 Identities = 25/65 (38%), Positives = 34/65 (52%) Frame = -3 Query: 259 QPGIEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIP 80 Q + F ++I +D N D KNR GAG++PY L++ P + V MGIP Sbjct: 865 QAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMK-----PFSDSGVTGMGIP 919 Query: 79 NSISI 65 NS SI Sbjct: 920 NSTSI 924
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 41.6 bits (96), Expect = 5e-04 Identities = 24/61 (39%), Positives = 35/61 (57%) Frame = -3 Query: 247 EEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSIS 68 + F + +I E++ + NND +NR+G +PY LL PS E+ + GIPNSIS Sbjct: 811 KRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPS-----SEEGLTCRGIPNSIS 865 Query: 67 I 65 I Sbjct: 866 I 866
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 41.2 bits (95), Expect = 7e-04 Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 4/72 (5%) Frame = -3 Query: 268 WGGQPG-IEEFKESTRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 101 W G +E FK +K+ E ++ E N D +NR+G +PY LL PS E+ Sbjct: 787 WTSDAGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPS-----SEEG 841 Query: 100 VMEMGIPNSISI 65 + GIPNSISI Sbjct: 842 LTFRGIPNSISI 853
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 38.5 bits (88), Expect(2) = 8e-04 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = -3 Query: 250 IEEFKESTRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIP 80 +E FK K+ + ++ E NND +NR G +PY LL PS ++ + GIP Sbjct: 798 LEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPS-----SKEGLTFRGIP 852 Query: 79 NSISI 65 NSISI Sbjct: 853 NSISI 857 Score = 21.6 bits (44), Expect(2) = 8e-04 Identities = 9/25 (36%), Positives = 14/25 (56%) Frame = -1 Query: 306 YMGTHEEPAWTKDGVVNQALRSSRR 232 Y+G + P WT D +AL + +R Sbjct: 782 YLGERDNPNWTSD---TRALEAFKR 803
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 40.4 bits (93), Expect = 0.001 Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Frame = -3 Query: 241 FKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRP-SDGDPTDEKMVMEMGIPNSISI 65 F ++I +D N D KNR GAG++PY L++P SD T MGIPNS SI Sbjct: 888 FTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTG------MGIPNSTSI 941
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 36.2 bits (82), Expect(2) = 0.003 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%) Frame = -3 Query: 250 IEEFKESTRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIP 80 +E FK K+ +++ N+DP +NR G +PY LL S E+ + GIP Sbjct: 805 LEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRS-----SEEGLTFKGIP 859 Query: 79 NSISI 65 NSISI Sbjct: 860 NSISI 864 Score = 21.9 bits (45), Expect(2) = 0.003 Identities = 8/21 (38%), Positives = 11/21 (52%) Frame = -1 Query: 306 YMGTHEEPAWTKDGVVNQALR 244 Y+G E P WT D +A + Sbjct: 789 YLGERETPNWTTDKKALEAFK 809
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 33.5 bits (75), Expect(2) = 0.003 Identities = 22/61 (36%), Positives = 29/61 (47%) Frame = -3 Query: 247 EEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSIS 68 + F + I +Q+ + N D NR G PY LL PT E + GIPNS+S Sbjct: 806 DRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLL-----FPTSEGGLTGKGIPNSVS 860 Query: 67 I 65 I Sbjct: 861 I 861 Score = 24.6 bits (52), Expect(2) = 0.003 Identities = 8/13 (61%), Positives = 9/13 (69%) Frame = -1 Query: 306 YMGTHEEPAWTKD 268 Y+G E P WTKD Sbjct: 786 YLGQRESPEWTKD 798
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 32.0 bits (71), Expect(2) = 0.008 Identities = 22/61 (36%), Positives = 28/61 (45%) Frame = -3 Query: 247 EEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSIS 68 E F I +Q+ + N + NR G PY LL P T E + GIPNS+S Sbjct: 805 ERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLLFP-----TSEGGLTGKGIPNSVS 859 Query: 67 I 65 I Sbjct: 860 I 860 Score = 24.6 bits (52), Expect(2) = 0.008 Identities = 8/13 (61%), Positives = 9/13 (69%) Frame = -1 Query: 306 YMGTHEEPAWTKD 268 Y+G E P WTKD Sbjct: 785 YLGQRESPEWTKD 797
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 36.6 bits (83), Expect = 0.016 Identities = 20/61 (32%), Positives = 35/61 (57%) Frame = -3 Query: 247 EEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSIS 68 + F + ++I E++ N D +NR+G +PY +L P+ +++ + GIPNSIS Sbjct: 806 KRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPT----CEDEGLTFRGIPNSIS 861 Query: 67 I 65 I Sbjct: 862 I 862
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 35.0 bits (79), Expect = 0.048 Identities = 23/61 (37%), Positives = 30/61 (49%) Frame = -3 Query: 247 EEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSIS 68 E F + I ++ N+ KNR G VPY LL PT E+ + GIPNS+S Sbjct: 804 ERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLL-----FPTSEEGLTGKGIPNSVS 858 Query: 67 I 65 I Sbjct: 859 I 859
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 33.1 bits (74), Expect = 0.18 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%) Frame = -3 Query: 268 WGGQPG-IEEFKESTRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPS 128 W G +E FK +K+ E ++ + NND +NR G +PY LL PS Sbjct: 681 WTSDAGPLEAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPS 731
>PPIL4_NEUCR (Q871A4) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 494 Score = 30.8 bits (68), Expect = 0.90 Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 9/70 (12%) Frame = -3 Query: 292 RRAGMDKGWGGQPGIEEFKESTRKIVEQVDEWNND---------PDRKNRHGAGMVPYVL 140 R++ +G GG G++E E RK ++ EW ND D K RH P Sbjct: 347 RKSAARRGGGGWGGVDEL-EKWRKYRDEDVEWRNDDSYQMVHGVEDLKGRHDGDKPPVRD 405 Query: 139 LRPSDGDPTD 110 RP G D Sbjct: 406 SRPDVGGGRD 415
>DEFR7_MOUSE (P50715) Defensin-related cryptdin, related sequence 7 precursor| (Cryptdin-related protein 4C-2) (CRS4C) Length = 91 Score = 28.9 bits (63), Expect = 3.4 Identities = 12/21 (57%), Positives = 12/21 (57%) Frame = +1 Query: 190 RCSTHPPAPRSSWCSP*TPQC 252 RC PP PR SWC P P C Sbjct: 64 RCPRCPPCPRCSWC-PRCPTC 83
>ASPA_PROMM (Q7V5L6) Probable aspartoacylase (EC 3.5.1.15)| Length = 304 Score = 28.9 bits (63), Expect = 3.4 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = -3 Query: 208 VDEWNNDPDRKNRHGAGMVPYV 143 +D+W+ P+ N HG G+VP + Sbjct: 23 LDQWSQTPELINTHGVGVVPVI 44
>Y463_CHRVO (Q7P0V2) UPF0341 protein CV_0463| Length = 258 Score = 28.5 bits (62), Expect = 4.5 Identities = 16/35 (45%), Positives = 17/35 (48%) Frame = -2 Query: 185 RPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHP 81 R E T +HGAV A G H RE G G G P Sbjct: 45 RLELLTTGKHGAVYAEFVEGAARHRREQGGGRGQP 79
>PCDGM_PANTR (Q5DRA2) Protocadherin gamma C5 precursor (PCDH-gamma-C5)| Length = 944 Score = 28.5 bits (62), Expect = 4.5 Identities = 14/46 (30%), Positives = 24/46 (52%) Frame = -3 Query: 172 RHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI*AALCVCNST 35 R G ++ ++L +D PT + V+ +GIP + I L N+T Sbjct: 222 RSGTTLISVIVLDINDNAPTFQSSVLRVGIPENAPIGTLLLRLNAT 267
>PCDGM_HUMAN (Q9Y5F6) Protocadherin gamma C5 precursor (PCDH-gamma-C5)| Length = 944 Score = 28.5 bits (62), Expect = 4.5 Identities = 14/46 (30%), Positives = 24/46 (52%) Frame = -3 Query: 172 RHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI*AALCVCNST 35 R G ++ ++L +D PT + V+ +GIP + I L N+T Sbjct: 222 RSGTTLISVIVLDINDNAPTFQSSVLRVGIPENAPIGTLLLRLNAT 267
>EPC1_HUMAN (Q9H2F5) Enhancer of polycomb homolog 1| Length = 836 Score = 28.1 bits (61), Expect = 5.8 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 5/66 (7%) Frame = -3 Query: 280 MDKGWGGQP-GIEE----FKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDP 116 ++KG G QP ++E KE I E + W RKN G ++P V DG Sbjct: 146 LEKGSGQQPVSLQEAKLLLKEDDELIREVYEYWIKK--RKNCRGPSLIPSVKQEKRDGSS 203 Query: 115 TDEKMV 98 T++ V Sbjct: 204 TNDPYV 209
>RK121_SECCE (Q06030) 50S ribosomal protein L12-1, chloroplast precursor| (CL12-1) Length = 174 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +3 Query: 201 SSTCSTIFLVLSLNSSMPG*PPHP 272 S+T S+ F +LSL SS P PP P Sbjct: 3 STTFSSAFSILSLPSSSPSPPPSP 26
>PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type 5 precursor| (EC 3.4.21.-) (Proprotein convertase PC6-like) (aPC6) Length = 1696 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 3/47 (6%) Frame = -2 Query: 266 GWSTRH*GVQGEHQEDRGA---GG*VEQRPRPEKPTRRRHGAVCAAQ 135 G T H + G + D + GG ++ PR E RHG CA + Sbjct: 194 GSETDHPDLAGNYDPDASSDINGGTLDPTPRYEYTNENRHGTRCAGE 240
>MDC1_RAT (Q5U2M8) Mediator of DNA damage checkpoint protein 1| Length = 1279 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Frame = -3 Query: 268 WGGQPGIEEFKESTRKIVEQ---VDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPT 113 W G+PG EE K + +VE+ ++D D + G V P D D T Sbjct: 410 WSGEPGTEEVKSQPQVLVERSQSASGRDSDTDVEEGSSGGKREIVPDSPMDVDET 464
>COAT_PAVHB (P07299) Probable coat protein VP1| Length = 781 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = -3 Query: 241 FKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGD 119 FK RK + WN P H AG +PYVL P+ D Sbjct: 719 FKLGPRKATGR---WNPQPGVYPPHAAGHLPYVLYDPTATD 756
>PTH_METJA (Q60363) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)| Length = 115 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 4/40 (10%) Frame = -3 Query: 283 GMDKG----WGGQPGIEEFKESTRKIVEQVDEWNNDPDRK 176 GM KG GG IE F ++ RK VDEW + +K Sbjct: 12 GMGKGKMVAQGGHAIIEAFLDAKRKNPRAVDEWLREGQKK 51 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,831,424 Number of Sequences: 219361 Number of extensions: 1002873 Number of successful extensions: 2977 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 2863 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2963 length of database: 80,573,946 effective HSP length: 80 effective length of database: 63,025,066 effective search space used: 1512601584 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
