ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl18c01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CR478284.5| Mouse DNA sequence from clone WI1-2221M10 on chr... 48 0.005
2emb|AL589623.27| Mouse DNA sequence from clone RP23-111C11 on ch... 48 0.005
3emb|AL954686.9| Mouse DNA sequence from clone RP23-167L6 on chro... 48 0.005
4emb|AL808133.17| Mouse DNA sequence from clone RP23-457N24 on ch... 48 0.005
5emb|AL451076.14| Mouse DNA sequence from clone RP23-43O20 on chr... 48 0.005
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.2
7dbj|AP005722.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.2
8gb|AC132363.3| Mus musculus BAC clone RP23-455N1 from 1, complet... 40 1.2
9emb|AL671893.7| Mouse DNA sequence from clone RP23-170G19 on chr... 40 1.2
10gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome 38 4.9
11gb|AC122888.5| Mus musculus BAC clone RP23-93F11 from chromosome... 38 4.9
12gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome 38 4.9
13gb|AC116461.13| Mus musculus chromosome 10, clone RP23-463P8, co... 38 4.9
14gb|AC122118.7| Mus musculus chromosome 18, clone RP24-225P17, co... 38 4.9
15gb|AC158983.2| Mus musculus BAC clone RP23-264L8 from chromosome... 38 4.9
16gb|AC108909.15| Mus musculus chromosome 3, clone RP24-245I16, co... 38 4.9
17gb|AC125104.3| Mus musculus BAC clone RP24-219E4 from chromosome... 38 4.9
18gb|AE014307.1| Homo sapiens chromosome 13q34 schizophrenia regio... 38 4.9
19emb|CR847832.18| Zebrafish DNA sequence from clone DKEY-30K23 in... 38 4.9
20emb|BX571713.11| Zebrafish DNA sequence from clone DKEY-19H21 in... 38 4.9
21emb|AL442203.12| Human DNA sequence from clone RP11-12I24 on chr... 38 4.9
22emb|AL358855.16| Human DNA sequence from clone RP11-317H7 on chr... 38 4.9
23emb|BX569691.1| Synechococcus sp. WH8102 complete genome; segmen... 38 4.9
24emb|BX936331.6| Zebrafish DNA sequence from clone CH211-1C10 in ... 38 4.9
25emb|BX572620.15| Zebrafish DNA sequence from clone CH211-202G13 ... 38 4.9
26gb|AC020987.8| Homo sapiens chromosome 8, clone RP11-249L4, comp... 38 4.9
27gb|AC126538.1| Homo sapiens chromosome 16 clone CTD-3225F13, com... 38 4.9
28gb|AC100811.2| Homo sapiens chromosome 8, clone CTD-2532M24, com... 38 4.9
29gb|AC090573.6| Homo sapiens chromosome 8, clone RP11-440B23, com... 38 4.9
30gb|AC107943.4| Homo sapiens chromosome 8, clone RP11-11I1, compl... 38 4.9
31gb|AC087667.4| Homo sapiens chromosome 8, clone RP11-65D17, comp... 38 4.9
32gb|AC008919.9| Homo sapiens chromosome 5 clone CTD-2276O24, comp... 38 4.9
33emb|BX321868.13| Zebrafish DNA sequence from clone RP71-41I21, c... 38 4.9
34gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 38 4.9
35gb|AC022441.5| Homo sapiens chromosome 5 clone RP11-317O24, comp... 38 4.9
36gb|AC154534.2| Mus musculus BAC clone RP23-469P20 from chromosom... 38 4.9
37gb|AC149053.3| Mus musculus BAC clone RP24-502E20 from chromosom... 38 4.9
38gb|AC011727.16| Homo sapiens chromosome 8, clone RP11-10H7, comp... 38 4.9
39gb|AC008831.7|AC008831 Homo sapiens chromosome 5 clone CTD-2146K... 38 4.9
40emb|AL928880.5| Zebrafish DNA sequence from clone CH211-69P21 in... 38 4.9
41gb|AY800246.1| Tribolium castaneum pangolin gene, partial cds 38 4.9
42gb|AC007053.15|AC007053 Drosophila melanogaster, chromosome 3R, ... 38 4.9
43gb|AE003726.3| Drosophila melanogaster chromosome 3R, section 64... 38 4.9
44gb|AC007014.1|AC007014 Homo sapiens chromosome 16 clone 66H6, co... 38 4.9
45gb|AC167242.4| Mus musculus BAC clone RP24-354I16 from chromosom... 38 4.9
46emb|AL772138.15| Mouse DNA sequence from clone RP23-213F17 on ch... 38 4.9
47emb|AL807808.12| Mouse DNA sequence from clone RP23-382D10 on ch... 38 4.9
48emb|AL831770.3| Human DNA sequence from clone RP13-297M11 on chr... 38 4.9
49dbj|AP004283.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 38 4.9
50emb|AL611947.11| Mouse DNA sequence from clone RP23-319H15 on ch... 38 4.9 
>emb|CR478284.5| Mouse DNA sequence from clone WI1-2221M10 on chromosome X, complete
             sequence
          Length = 42243

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 43    tttcattaaacagaaaaaccacagaacc 70
             |||||||||||| |||||||||||||||
Sbjct: 26132 tttcattaaacataaaaaccacagaacc 26105
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>emb|AL589623.27| Mouse DNA sequence from clone RP23-111C11 on chromosome X, complete
             sequence
          Length = 43644

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 43    tttcattaaacagaaaaaccacagaacc 70
             |||||||||||| |||||||||||||||
Sbjct: 32353 tttcattaaacataaaaaccacagaacc 32380
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>emb|AL954686.9| Mouse DNA sequence from clone RP23-167L6 on chromosome X, complete
             sequence
          Length = 78045

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 43    tttcattaaacagaaaaaccacagaacc 70
             |||||||||||| |||||||||||||||
Sbjct: 72641 tttcattaaacataaaaaccacagaacc 72668



 Score = 40.1 bits (20), Expect = 1.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 43    tttcattaaacagaaaaaccacagaacc 70
             |||||||||| | |||||||||||||||
Sbjct: 38591 tttcattaaatacaaaaaccacagaacc 38618
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>emb|AL808133.17| Mouse DNA sequence from clone RP23-457N24 on chromosome X, complete
              sequence
          Length = 170192

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 43     tttcattaaacagaaaaaccacagaacc 70
              |||||||||||| |||||||||||||||
Sbjct: 128690 tttcattaaacataaaaaccacagaacc 128663



 Score = 48.1 bits (24), Expect = 0.005
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 43    tttcattaaacagaaaaaccacagaacc 70
             |||||||||||| |||||||||||||||
Sbjct: 85069 tttcattaaacataaaaaccacagaacc 85042



 Score = 48.1 bits (24), Expect = 0.005
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 43    tttcattaaacagaaaaaccacagaacc 70
             |||||||||||| |||||||||||||||
Sbjct: 39666 tttcattaaacataaaaaccacagaacc 39693
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>emb|AL451076.14| Mouse DNA sequence from clone RP23-43O20 on chromosome X, complete
              sequence
          Length = 203581

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 43     tttcattaaacagaaaaaccacagaacc 70
              |||||||||||| |||||||||||||||
Sbjct: 194309 tttcattaaacataaaaaccacagaacc 194336
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 33       accctccaattttcattaaa 52
                ||||||||||||||||||||
Sbjct: 14301186 accctccaattttcattaaa 14301205
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>dbj|AP005722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1261_A08
          Length = 162113

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     accctccaattttcattaaa 52
              ||||||||||||||||||||
Sbjct: 117731 accctccaattttcattaaa 117750
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>gb|AC132363.3| Mus musculus BAC clone RP23-455N1 from 1, complete sequence
          Length = 180858

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 50     aaacagaaaaaccacagaaccaaa 73
              |||||||||||||||| |||||||
Sbjct: 113127 aaacagaaaaaccacaaaaccaaa 113104
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>emb|AL671893.7| Mouse DNA sequence from clone RP23-170G19 on chromosome X, complete
             sequence
          Length = 175057

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    atcactacaggcaaaacaaa 95
             ||||||||||||||||||||
Sbjct: 73694 atcactacaggcaaaacaaa 73713
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>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 42     ttttcattaaacagaaaaa 60
              |||||||||||||||||||
Sbjct: 461544 ttttcattaaacagaaaaa 461526
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>gb|AC122888.5| Mus musculus BAC clone RP23-93F11 from chromosome 3, complete sequence
          Length = 206760

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 60     accacagaaccaaactatcacta 82
              |||||||| ||||||||||||||
Sbjct: 187511 accacagagccaaactatcacta 187489
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>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 42     ttttcattaaacagaaaaa 60
              |||||||||||||||||||
Sbjct: 461357 ttttcattaaacagaaaaa 461339
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>gb|AC116461.13| Mus musculus chromosome 10, clone RP23-463P8, complete sequence
          Length = 203737

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 84     aggcaaaacaaacagaagg 102
              |||||||||||||||||||
Sbjct: 126595 aggcaaaacaaacagaagg 126577
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>gb|AC122118.7| Mus musculus chromosome 18, clone RP24-225P17, complete sequence
          Length = 190301

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 43     tttcattaaacagaaaaac 61
              |||||||||||||||||||
Sbjct: 111049 tttcattaaacagaaaaac 111067
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>gb|AC158983.2| Mus musculus BAC clone RP23-264L8 from chromosome 14, complete sequence
          Length = 218519

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 83    caggcaaaacaaacagaag 101
             |||||||||||||||||||
Sbjct: 84043 caggcaaaacaaacagaag 84061
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>gb|AC108909.15| Mus musculus chromosome 3, clone RP24-245I16, complete sequence
          Length = 194252

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 60    accacagaaccaaactatcacta 82
             |||||||| ||||||||||||||
Sbjct: 62704 accacagagccaaactatcacta 62682
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>gb|AC125104.3| Mus musculus BAC clone RP24-219E4 from chromosome 18, complete sequence
          Length = 144661

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 56    aaaaaccacagaaccaaac 74
             |||||||||||||||||||
Sbjct: 32963 aaaaaccacagaaccaaac 32945
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>gb|AE014307.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 4
             of 11 of the complete sequence
          Length = 250029

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 43    tttcattaaacagaaaaac 61
             |||||||||||||||||||
Sbjct: 40958 tttcattaaacagaaaaac 40976
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>emb|CR847832.18| Zebrafish DNA sequence from clone DKEY-30K23 in linkage group 8, complete
              sequence
          Length = 135277

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 47     attaaacagaaaaaccaca 65
              |||||||||||||||||||
Sbjct: 102082 attaaacagaaaaaccaca 102100
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>emb|BX571713.11| Zebrafish DNA sequence from clone DKEY-19H21 in linkage group 9,
             complete sequence
          Length = 103882

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 82    acaggcaaaacaaacagaa 100
             |||||||||||||||||||
Sbjct: 88235 acaggcaaaacaaacagaa 88253
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>emb|AL442203.12| Human DNA sequence from clone RP11-12I24 on chromosome 13 Contains
            the 5' end of a novel gene (contains KIAA0564 and
            FLJ21779) possible ortholog of RIKEN cDNA 1300010F03
            gene, a lysyl-tRNA synthetase (KARS) pseudogene, a
            ribosomal protein S28 (RPS28) pseudogene and 2 CpG
            islands, complete sequence
          Length = 163511

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 50   aaacagaaaaaccacagaa 68
            |||||||||||||||||||
Sbjct: 6682 aaacagaaaaaccacagaa 6664
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>emb|AL358855.16| Human DNA sequence from clone RP11-317H7 on chromosome 13, complete
             sequence
          Length = 156075

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 43    tttcattaaacagaaaaac 61
             |||||||||||||||||||
Sbjct: 91644 tttcattaaacagaaaaac 91662
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>emb|BX569691.1| Synechococcus sp. WH8102 complete genome; segment 3/7
          Length = 347365

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 20     ggacggggaattcaccctc 38
              |||||||||||||||||||
Sbjct: 341665 ggacggggaattcaccctc 341647
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>emb|BX936331.6| Zebrafish DNA sequence from clone CH211-1C10 in linkage group 3,
             complete sequence
          Length = 163806

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 79    actacaggcaaaacaaaca 97
             |||||||||||||||||||
Sbjct: 37252 actacaggcaaaacaaaca 37270
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>emb|BX572620.15| Zebrafish DNA sequence from clone CH211-202G13 in linkage group 3,
             complete sequence
          Length = 199512

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 79    actacaggcaaaacaaaca 97
             |||||||||||||||||||
Sbjct: 34338 actacaggcaaaacaaaca 34356
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>gb|AC020987.8| Homo sapiens chromosome 8, clone RP11-249L4, complete sequence
          Length = 161153

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 46     cattaaacagaaaaaccacagaa 68
              ||||||||||||||| |||||||
Sbjct: 139627 cattaaacagaaaaatcacagaa 139605
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>gb|AC126538.1| Homo sapiens chromosome 16 clone CTD-3225F13, complete sequence
          Length = 188015

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 71    aaactatcactacaggcaa 89
             |||||||||||||||||||
Sbjct: 50330 aaactatcactacaggcaa 50348
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>gb|AC100811.2| Homo sapiens chromosome 8, clone CTD-2532M24, complete sequence
          Length = 194254

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 42    ttttcattaaacagaaaaa 60
             |||||||||||||||||||
Sbjct: 98990 ttttcattaaacagaaaaa 98972
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>gb|AC090573.6| Homo sapiens chromosome 8, clone RP11-440B23, complete sequence
          Length = 204032

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 43     tttcattaaacagaaaaac 61
              |||||||||||||||||||
Sbjct: 194239 tttcattaaacagaaaaac 194257
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>gb|AC107943.4| Homo sapiens chromosome 8, clone RP11-11I1, complete sequence
          Length = 195110

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 82    acaggcaaaacaaacagaa 100
             |||||||||||||||||||
Sbjct: 36200 acaggcaaaacaaacagaa 36218
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>gb|AC087667.4| Homo sapiens chromosome 8, clone RP11-65D17, complete sequence
          Length = 172613

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 43     tttcattaaacagaaaaac 61
              |||||||||||||||||||
Sbjct: 151708 tttcattaaacagaaaaac 151690
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>gb|AC008919.9| Homo sapiens chromosome 5 clone CTD-2276O24, complete sequence
          Length = 106689

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 42    ttttcattaaacagaaaaa 60
             |||||||||||||||||||
Sbjct: 92431 ttttcattaaacagaaaaa 92449
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>emb|BX321868.13| Zebrafish DNA sequence from clone RP71-41I21, complete sequence
          Length = 135717

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 50     aaacagaaaaaccacagaa 68
              |||||||||||||||||||
Sbjct: 103644 aaacagaaaaaccacagaa 103626
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 12      tccttacaggacggggaat 30
               |||||||||||||||||||
Sbjct: 6201825 tccttacaggacggggaat 6201807
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>gb|AC022441.5| Homo sapiens chromosome 5 clone RP11-317O24, complete sequence
          Length = 193057

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 42     ttttcattaaacagaaaaa 60
              |||||||||||||||||||
Sbjct: 139632 ttttcattaaacagaaaaa 139614
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>gb|AC154534.2| Mus musculus BAC clone RP23-469P20 from chromosome 16, complete
             sequence
          Length = 178462

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 50    aaacagaaaaaccacagaa 68
             |||||||||||||||||||
Sbjct: 96604 aaacagaaaaaccacagaa 96622
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>gb|AC149053.3| Mus musculus BAC clone RP24-502E20 from chromosome 7, complete sequence
          Length = 221785

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 86     gcaaaacaaacagaaggtt 104
              |||||||||||||||||||
Sbjct: 180085 gcaaaacaaacagaaggtt 180067
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>gb|AC011727.16| Homo sapiens chromosome 8, clone RP11-10H7, complete sequence
          Length = 152530

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 82     acaggcaaaacaaacagaa 100
              |||||||||||||||||||
Sbjct: 105480 acaggcaaaacaaacagaa 105498
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>gb|AC008831.7|AC008831 Homo sapiens chromosome 5 clone CTD-2146K10, complete sequence
          Length = 144722

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 42     ttttcattaaacagaaaaa 60
              |||||||||||||||||||
Sbjct: 136948 ttttcattaaacagaaaaa 136930
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>emb|AL928880.5| Zebrafish DNA sequence from clone CH211-69P21 in linkage group 7,
             complete sequence
          Length = 98850

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 44    ttcattaaacagaaaaaccacag 66
             |||||||||||| ||||||||||
Sbjct: 90240 ttcattaaacagcaaaaccacag 90262
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>gb|AY800246.1| Tribolium castaneum pangolin gene, partial cds
          Length = 158657

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 55     gaaaaaccacagaaccaaa 73
              |||||||||||||||||||
Sbjct: 140968 gaaaaaccacagaaccaaa 140950
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>gb|AC007053.15|AC007053 Drosophila melanogaster, chromosome 3R, region 92A1-92A2, BAC clone
              BACR48K23, complete sequence
          Length = 173564

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 82     acaggcaaaacaaacagaa 100
              |||||||||||||||||||
Sbjct: 117834 acaggcaaaacaaacagaa 117852
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>gb|AE003726.3| Drosophila melanogaster chromosome 3R, section 64 of 118 of the
             complete sequence
          Length = 247876

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 82    acaggcaaaacaaacagaa 100
             |||||||||||||||||||
Sbjct: 13296 acaggcaaaacaaacagaa 13314
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>gb|AC007014.1|AC007014 Homo sapiens chromosome 16 clone 66H6, complete sequence
          Length = 167080

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 71     aaactatcactacaggcaa 89
              |||||||||||||||||||
Sbjct: 107737 aaactatcactacaggcaa 107755
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>gb|AC167242.4| Mus musculus BAC clone RP24-354I16 from chromosome 7, complete sequence
          Length = 202422

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 86     gcaaaacaaacagaaggtt 104
              |||||||||||||||||||
Sbjct: 182281 gcaaaacaaacagaaggtt 182299
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>emb|AL772138.15| Mouse DNA sequence from clone RP23-213F17 on chromosome 4, complete
             sequence
          Length = 229213

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 84    aggcaaaacaaacagaagg 102
             |||||||||||||||||||
Sbjct: 61865 aggcaaaacaaacagaagg 61883
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>emb|AL807808.12| Mouse DNA sequence from clone RP23-382D10 on chromosome 4, complete
             sequence
          Length = 198460

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 82    acaggcaaaacaaacagaaggtt 104
             |||||||||| ||||||||||||
Sbjct: 37702 acaggcaaaataaacagaaggtt 37724
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>emb|AL831770.3| Human DNA sequence from clone RP13-297M11 on chromosome 1, complete
             sequence
          Length = 151857

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 42    ttttcattaaacagaaaaa 60
             |||||||||||||||||||
Sbjct: 11926 ttttcattaaacagaaaaa 11908
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>dbj|AP004283.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1187A6
          Length = 157390

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 42     ttttcattaaacagaaaaa 60
              |||||||||||||||||||
Sbjct: 116334 ttttcattaaacagaaaaa 116352
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>emb|AL611947.11| Mouse DNA sequence from clone RP23-319H15 on chromosome 4, complete
             sequence
          Length = 64760

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 82    acaggcaaaacaaacagaa 100
             |||||||||||||||||||
Sbjct: 40763 acaggcaaaacaaacagaa 40781


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,639,792
Number of Sequences: 3902068
Number of extensions: 1639792
Number of successful extensions: 152931
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 152707
Number of HSP's gapped (non-prelim): 224
length of query: 108
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 87
effective length of database: 17,151,101,840
effective search space: 1492145860080
effective search space used: 1492145860080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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