Clone Name | rbastl18b01 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_626340.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd2_1130), partial mRNA Length = 2046 Score = 46.1 bits (23), Expect = 0.054 Identities = 26/27 (96%) Strand = Plus / Plus Query: 81 agctaattatctcaaatacattacaac 107 |||||||||||||||||||||| |||| Sbjct: 923 agctaattatctcaaatacatttcaac 949
>gb|AC136506.10| Medicago truncatula clone mth2-33c8, complete sequence Length = 135457 Score = 42.1 bits (21), Expect = 0.85 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 gttgtgttcaaaataactaaa 26 ||||||||||||||||||||| Sbjct: 92768 gttgtgttcaaaataactaaa 92788
>gb|AC171499.14| Medicago truncatula clone mth2-157b12, complete sequence Length = 81116 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 gatgttgtgttcaaaataac 22 |||||||||||||||||||| Sbjct: 75402 gatgttgtgttcaaaataac 75421
>gb|AC159238.2| Mus musculus BAC clone RP24-477O8 from chromosome 12, complete sequence Length = 176407 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 ttgatcatatatgctgactg 240 |||||||||||||||||||| Sbjct: 127799 ttgatcatatatgctgactg 127818
>gb|AC122887.2| Mus musculus BAC clone RP23-91L6 from 10, complete sequence Length = 186103 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 atgttgtgttcaaaataactaaag 27 ||||| |||||||||||||||||| Sbjct: 78671 atgttatgttcaaaataactaaag 78694
>gb|AC151740.21| Medicago truncatula clone mth2-82n16, complete sequence Length = 131700 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 caagttcatgtatgaacagc 83 |||||||||||||||||||| Sbjct: 72067 caagttcatgtatgaacagc 72086
>gb|AC107626.2| Homo sapiens chromosome 3 clone RP11-1008M1, complete sequence Length = 179484 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 agttcatgtatgaacagcta 85 |||||||||||||||||||| Sbjct: 161081 agttcatgtatgaacagcta 161100
>dbj|AK157326.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830211E14 product:unclassifiable, full insert sequence Length = 1603 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 atgttgtgttcaaaataactaaag 27 ||||| |||||||||||||||||| Sbjct: 745 atgttatgttcaaaataactaaag 722
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 aaaataactaaagcgatttt 34 |||||||||||||||||||| Sbjct: 343794 aaaataactaaagcgatttt 343813
>gb|AC153930.2| Mus musculus 10 BAC RP24-461H14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 186915 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 atgttgtgttcaaaataactaaag 27 ||||| |||||||||||||||||| Sbjct: 17068 atgttatgttcaaaataactaaag 17045 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,126,823 Number of Sequences: 3902068 Number of extensions: 2126823 Number of successful extensions: 41944 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 41913 Number of HSP's gapped (non-prelim): 31 length of query: 259 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 237 effective length of database: 17,147,199,772 effective search space: 4063886345964 effective search space used: 4063886345964 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)