>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                           
Query: 140     actttcaccttcttgctgttggctttatcaactttctcgctttcaaccttcatctttttt 199
               |||||||||||||||||||| ||||| ||||| |||||  |||| ||||||||||| || 
Sbjct: 3070723 actttcaccttcttgctgttagctttgtcaaccttctcattttcgaccttcatcttcttg 3070664

                                     
Query: 200     atggaatccaaaagcgatgatg 221
               |||||||| ||||| |||||||
Sbjct: 3070663 atggaatcaaaaagggatgatg 3070642

>dbj|AP005560.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1178_D01
          Length = 121768

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                         
Query: 140   actttcaccttcttgctgttggctttatcaactttctcgctttcaaccttcatctttttt 199
             |||||||||||||||||||| ||||| ||||| |||||  |||| ||||||||||| || 
Sbjct: 90689 actttcaccttcttgctgttagctttgtcaaccttctcattttcgaccttcatcttcttg 90630

                                   
Query: 200   atggaatccaaaagcgatgatg 221
             |||||||| ||||| |||||||
Sbjct: 90629 atggaatcaaaaagggatgatg 90608

>dbj|AK109602.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-E09, full
            insert sequence
          Length = 2854

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                        
Query: 140  actttcaccttcttgctgttggctttatcaactttctcgctttcaaccttcatctttttt 199
            |||||||||||||||||||| ||||| ||||| |||||  |||| ||||||||||| || 
Sbjct: 2634 actttcaccttcttgctgttagctttgtcaaccttctcattttcgaccttcatcttcttg 2575

                                  
Query: 200  atggaatccaaaagcgatgatg 221
            |||||||| ||||| |||||||
Sbjct: 2574 atggaatcaaaaagggatgatg 2553

>gb|AC108924.5| Homo sapiens chromosome 8, clone RP11-1113C19, complete sequence
          Length = 125488

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    aattttaagtggaaaggaaaa 55
             |||||||||||||||||||||
Sbjct: 94417 aattttaagtggaaaggaaaa 94437

>gb|AC116154.2| Homo sapiens chromosome 8, clone RP11-927P11, complete sequence
          Length = 196518

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 35   aattttaagtggaaaggaaaa 55
            |||||||||||||||||||||
Sbjct: 3937 aattttaagtggaaaggaaaa 3957

>gb|AC093788.3| Homo sapiens BAC clone RP11-218F10 from 4, complete sequence
          Length = 160853

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 20    caactacactaccagaattttaagtggaa 48
             ||||| ||||||||||| |||||||||||
Sbjct: 46634 caactccactaccagaactttaagtggaa 46606

>dbj|AP006647.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT29F18, TM0312,
             complete sequence
          Length = 119276

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    agtggaaaggaaaagcacttc 62
             |||||||||||||||||||||
Sbjct: 16799 agtggaaaggaaaagcacttc 16819

>dbj|AP006352.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT40O04, TM0348,
            complete sequence
          Length = 105070

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 42   agtggaaaggaaaagcacttc 62
            |||||||||||||||||||||
Sbjct: 9667 agtggaaaggaaaagcacttc 9647

>dbj|AP006138.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT37A17, TM0240,
              complete sequence
          Length = 121317

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 42     agtggaaaggaaaagcacttc 62
              |||||||||||||||||||||
Sbjct: 113236 agtggaaaggaaaagcacttc 113216

>dbj|AP006101.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09A07, TM0181,
              complete sequence
          Length = 185320

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 42     agtggaaaggaaaagcacttc 62
              |||||||||||||||||||||
Sbjct: 131513 agtggaaaggaaaagcacttc 131493

>dbj|AP004287.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1471H7
          Length = 172543

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    aattttaagtggaaaggaaaa 55
             |||||||||||||||||||||
Sbjct: 99047 aattttaagtggaaaggaaaa 99067

>gb|AY591682.1| Mus musculus clone IgK8-27 immunoglobulin kappa-like gene, partial
            sequence
          Length = 2901

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 118  aatgacaagaaaaaacaatt 137
            ||||||||||||||||||||
Sbjct: 2792 aatgacaagaaaaaacaatt 2773

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 36      attttaagtggaaaggaaaa 55
               ||||||||||||||||||||
Sbjct: 7037567 attttaagtggaaaggaaaa 7037586

>gb|AC159715.5| Mus musculus 6 BAC RP23-367A13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 209869

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 118    aatgacaagaaaaaacaatt 137
              ||||||||||||||||||||
Sbjct: 190288 aatgacaagaaaaaacaatt 190307

>emb|AL354982.12| Human DNA sequence from clone RP11-473H13 on chromosome 9 Contains part
              of the gene for the likely ortholog of mouse polydom
              (POLYDOM), complete sequence
          Length = 119077

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     taccagaattttaagtggaa 48
              ||||||||||||||||||||
Sbjct: 110571 taccagaattttaagtggaa 110552

>emb|AL157933.19| Human DNA sequence from clone RP11-395L12 on chromosome Xq21.1-21.33,
             complete sequence
          Length = 48768

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 35    aattttaagtggaaaggaaaagca 58
             |||||||||||||||| |||||||
Sbjct: 15014 aattttaagtggaaagaaaaagca 14991

>gb|AC155332.10| Mus musculus 6 BAC RP24-140J8 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 202181

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 118    aatgacaagaaaaaacaatt 137
              ||||||||||||||||||||
Sbjct: 107295 aatgacaagaaaaaacaatt 107314

>emb|BX323543.11| Zebrafish DNA sequence from clone DKEYP-67E1 in linkage group 25,
              complete sequence
          Length = 181520

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    caggtccaaatgacaagaaa 129
              ||||||||||||||||||||
Sbjct: 141185 caggtccaaatgacaagaaa 141166

>gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1175C11,
             complete sequence
          Length = 123620

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    attttaagtggaaaggaaaa 55
             ||||||||||||||||||||
Sbjct: 44798 attttaagtggaaaggaaaa 44779

>gb|AC109998.2| Homo sapiens chromosome 5 clone CTD-2203A3, complete sequence
          Length = 126394

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 116  caaatgacaagaaaaaacaa 135
            ||||||||||||||||||||
Sbjct: 1024 caaatgacaagaaaaaacaa 1005

>gb|AC091903.2| Homo sapiens chromosome 5 clone RP11-182I21, complete sequence
          Length = 194860

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   caaatgacaagaaaaaacaa 135
             ||||||||||||||||||||
Sbjct: 53535 caaatgacaagaaaaaacaa 53554

>gb|AC158672.6| Mus musculus 6 BAC RP23-64J23 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 216954

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 118  aatgacaagaaaaaacaatt 137
            ||||||||||||||||||||
Sbjct: 1310 aatgacaagaaaaaacaatt 1329

>emb|BX284697.8| Zebrafish DNA sequence from clone DKEY-7M11 in linkage group 1,
             complete sequence
          Length = 209946

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   aaatgacaagaaaaaacaat 136
             ||||||||||||||||||||
Sbjct: 70661 aaatgacaagaaaaaacaat 70680

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 36      attttaagtggaaaggaaaa 55
               ||||||||||||||||||||
Sbjct: 7035462 attttaagtggaaaggaaaa 7035481

>emb|AL132668.4|CNS01DT9 Human chromosome 14 DNA sequence BAC R-550M19 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 175725

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    atgacaagaaaaaacaatta 138
              ||||||||||||||||||||
Sbjct: 137047 atgacaagaaaaaacaatta 137066

>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome
          Length = 1767403

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    agaaaaaacaattatacttt 144
              ||||||||||||||||||||
Sbjct: 767198 agaaaaaacaattatacttt 767217

>gb|AC111089.27| Mus musculus chromosome 5, clone RP23-156F20, complete sequence
          Length = 211658

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    taccagaattttaagtggaa 48
             ||||||||||||||||||||
Sbjct: 86438 taccagaattttaagtggaa 86457


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,005,006
Number of Sequences: 3902068
Number of extensions: 3005006
Number of successful extensions: 265392
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 265071
Number of HSP's gapped (non-prelim): 321
length of query: 222
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 200
effective length of database: 17,147,199,772
effective search space: 3429439954400
effective search space used: 3429439954400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)