Clone Name | rbastl18a11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | emb|Z30243.1|SCCLHSP S.cereale (Halo) chloroplast mRNA for heat-... | 141 | 3e-31 | 2 | gb|AY324231.1| Rana catesbeiana androgen receptor mRNA, complete... | 38 | 2.9 |
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>emb|Z30243.1|SCCLHSP S.cereale (Halo) chloroplast mRNA for heat-shock protein Length = 2654 Score = 141 bits (71), Expect = 3e-31 Identities = 71/71 (100%) Strand = Plus / Minus Query: 2 aatggatgcctacagaactaactaatctctccatgggtcattctcgttctcagtcctgac 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2468 aatggatgcctacagaactaactaatctctccatgggtcattctcgttctcagtcctgac 2409 Query: 62 ttcggatggct 72 ||||||||||| Sbjct: 2408 ttcggatggct 2398
>gb|AY324231.1| Rana catesbeiana androgen receptor mRNA, complete cds Length = 3391 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 31 tccatgggtcattctcgttctca 53 ||||||||||||||||| ||||| Sbjct: 1700 tccatgggtcattctcggtctca 1678 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 439,560 Number of Sequences: 3902068 Number of extensions: 439560 Number of successful extensions: 42390 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 42388 Number of HSP's gapped (non-prelim): 2 length of query: 72 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 51 effective length of database: 17,151,101,840 effective search space: 874706193840 effective search space used: 874706193840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)