Clone Name | rbastl18a07 |
---|---|
Clone Library Name | barley_pub |
>emb|AL772362.8| Zebrafish DNA sequence from clone CH211-173K16 in linkage group 13, complete sequence Length = 165993 Score = 44.1 bits (22), Expect = 0.10 Identities = 25/26 (96%) Strand = Plus / Minus Query: 27 ttcatataagctctcgactgagtttc 52 |||||||| ||||||||||||||||| Sbjct: 151331 ttcatatatgctctcgactgagtttc 151306
>emb|BX629357.1|CNS09SBV Tetraodon nigroviridis BAC sequence Length = 168910 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 ttcttactaagttttcatata 34 ||||||||||||||||||||| Sbjct: 141218 ttcttactaagttttcatata 141198
>gb|AC017081.8| Homo sapiens BAC clone RP11-470J24 from 2, complete sequence Length = 149462 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 ccaaaactttcatatctaaa 81 |||||||||||||||||||| Sbjct: 29599 ccaaaactttcatatctaaa 29580
>gb|AC112484.8| Homo sapiens 3 BAC RP11-723O4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 185470 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 gtgtccaaaactttcatatc 77 |||||||||||||||||||| Sbjct: 41312 gtgtccaaaactttcatatc 41293
>dbj|AP002428.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-99C10, complete sequences Length = 175110 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 aaactttcatatctaaacca 84 |||||||||||||||||||| Sbjct: 139050 aaactttcatatctaaacca 139031
>dbj|AP000923.5| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-752D5, complete sequences Length = 170973 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 aaactttcatatctaaacca 84 |||||||||||||||||||| Sbjct: 31136 aaactttcatatctaaacca 31117
>gb|AC125083.3| Mus musculus chromosome 19 clone RP24-98I2, complete sequence Length = 172673 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 ttcatatctaaaccatgac 88 ||||||||||||||||||| Sbjct: 24616 ttcatatctaaaccatgac 24634
>gb|AC092562.4| Papio hamadryas BAC RP41-285I13 (Rosewell Park Cancer Institute BAC Library) complete sequence Length = 183586 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 42 gactgagtttcgctcggtg 60 ||||||||||||||||||| Sbjct: 54660 gactgagtttcgctcggtg 54642
>gb|AC008571.6| Homo sapiens chromosome 5 clone CTC-550M4, complete sequence Length = 214267 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 tctctctttcttactaagt 25 ||||||||||||||||||| Sbjct: 46893 tctctctttcttactaagt 46875 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,314,274 Number of Sequences: 3902068 Number of extensions: 1314274 Number of successful extensions: 69629 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 69613 Number of HSP's gapped (non-prelim): 16 length of query: 134 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 113 effective length of database: 17,151,101,840 effective search space: 1938074507920 effective search space used: 1938074507920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)