>gb|AC147570.3| Homo sapiens BAC clone RP11-1176F21 from UL, complete sequence
          Length = 191237

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 84   cacaccaaaaacaaactgatag 105
            ||||||||||||||||||||||
Sbjct: 2226 cacaccaaaaacaaactgatag 2247

>gb|AC004527.2|AC004527 Homo sapiens chromosome 21, Neurofibromatosis 1 (NF1) related locus,
             complete sequence
          Length = 131971

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 84    cacaccaaaaacaaactgatag 105
             ||||||||||||||||||||||
Sbjct: 94121 cacaccaaaaacaaactgatag 94100

>dbj|AP001660.1| Homo sapiens genomic DNA, chromosome 21q, section 4/105
          Length = 340000

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 84    cacaccaaaaacaaactgatag 105
             ||||||||||||||||||||||
Sbjct: 17742 cacaccaaaaacaaactgatag 17721

>gb|AY898799.1| Homo sapiens NF1-ch21 pseudogene, complete sequence
          Length = 10837

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 84   cacaccaaaaacaaactgatag 105
            ||||||||||||||||||||||
Sbjct: 2583 cacaccaaaaacaaactgatag 2562

>gb|AY898798.1| Homo sapiens NF1-ch18 pseudogene, complete sequence
          Length = 10834

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 84   cacaccaaaaacaaactgatag 105
            ||||||||||||||||||||||
Sbjct: 2577 cacaccaaaaacaaactgatag 2556

>dbj|AP001634.1| Homo sapiens genomic DNA, chromosome 21q11.1 clone:B585O4, D21S290-LL56
             region, complete sequence
          Length = 71829

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 84    cacaccaaaaacaaactgatag 105
             ||||||||||||||||||||||
Sbjct: 33976 cacaccaaaaacaaactgatag 33955

>dbj|AP001004.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-681B3, complete
             sequence
          Length = 182424

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 84    cacaccaaaaacaaactgatag 105
             ||||||||||||||||||||||
Sbjct: 97775 cacaccaaaaacaaactgatag 97796

>gb|AC008194.9| Drosophila melanogaster clone BACR49A05, complete sequence
          Length = 181437

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 17    tctcaaaacaaattagaattc 37
             |||||||||||||||||||||
Sbjct: 64814 tctcaaaacaaattagaattc 64794

>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome
          Length = 1931047

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 16     atctcaaaacaaattagaatt 36
              |||||||||||||||||||||
Sbjct: 337876 atctcaaaacaaattagaatt 337856

>gb|AE003511.4| Drosophila melanogaster chromosome X, section 63 of 74 of the complete
             sequence
          Length = 297969

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 17    tctcaaaacaaattagaattc 37
             |||||||||||||||||||||
Sbjct: 53196 tctcaaaacaaattagaattc 53176

>gb|AC113078.17| Mus musculus chromosome 18, clone RP23-287G21, complete sequence
          Length = 195627

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 9    tcaaaatatctcaaaacaaa 28
            ||||||||||||||||||||
Sbjct: 7206 tcaaaatatctcaaaacaaa 7187

>gb|AC122476.4| Mus musculus BAC clone RP24-334L2 from chromosome 18, complete sequence
          Length = 200538

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      tcaaaatatctcaaaacaaa 28
              ||||||||||||||||||||
Sbjct: 157997 tcaaaatatctcaaaacaaa 157978

>emb|AL589908.4| Human DNA sequence from clone RP11-258M3 on chromosome 6, complete
            sequence
          Length = 13135

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   tgccaacatcacaccaaaaa 94
            ||||||||||||||||||||
Sbjct: 2445 tgccaacatcacaccaaaaa 2464

>emb|AL512307.12| Human DNA sequence from clone RP11-285B6 on chromosome 1 Contains part
             of the RGS7 gene for regulator of G-protein signalling 7,
             complete sequence
          Length = 182323

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     aatcaaaatatctcaaaaca 26
             ||||||||||||||||||||
Sbjct: 89297 aatcaaaatatctcaaaaca 89278

>emb|AL157713.10| Human DNA sequence from clone RP11-110J1 on chromosome 1q23.3-24.3
              Contains the ETV3 gene for ets variant gene 3, a cytochrome
              c somatic pseudogene (HCP2), a ets variant gene 3 (ETV3)
              pseudogene, a keratin 8 (KRT8) pseudogene, a smu-1
              suppressor of mec-8 and unc-52 homolog (C. elegans) (SMU1)
              pseudogene, the 5' end of the ARHGEF11 gene for Rho guanine
              nucleotide exchange factor (GEF) 11 and two CPG islands,
              complete sequence
          Length = 167292

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     aaatatctcaaaacaaatta 31
              ||||||||||||||||||||
Sbjct: 119073 aaatatctcaaaacaaatta 119092

>emb|AL121919.20|HSJ492J12 Human DNA sequence from clone RP3-492J12 on chromosome 20 Contains the
             C20orf174 gene for chromosome 20 open reading frame 174
             and a CpG island, complete sequence
          Length = 129942

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   acaggaagaaccaaggaatg 209
             ||||||||||||||||||||
Sbjct: 95346 acaggaagaaccaaggaatg 95327

>gb|AC124157.4| Equus caballus clone CH241-37P10, complete sequence
          Length = 193986

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   ggcaaaggaataggatagaa 184
             ||||||||||||||||||||
Sbjct: 95592 ggcaaaggaataggatagaa 95611

>gb|AC154394.6| Mus musculus chromosome 18, clone RP23-315M1, complete sequence
          Length = 246033

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      aatcaaaatatctcaaaaca 26
              ||||||||||||||||||||
Sbjct: 183272 aatcaaaatatctcaaaaca 183253

>emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02,
              complete sequence
          Length = 173522

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     tcaaaacaaattagaattct 38
              ||||||||||||||||||||
Sbjct: 158800 tcaaaacaaattagaattct 158781

>gb|AC011399.6| Homo sapiens chromosome 5 clone CTB-25P15, complete sequence
          Length = 174158

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   ggcaaaggaataggatagaa 184
             ||||||||||||||||||||
Sbjct: 72880 ggcaaaggaataggatagaa 72861

>gb|AC107943.4| Homo sapiens chromosome 8, clone RP11-11I1, complete sequence
          Length = 195110

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 267    atgcatcatcataaccagac 286
              ||||||||||||||||||||
Sbjct: 143504 atgcatcatcataaccagac 143485

>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026
          Length = 2324132

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 161     tcatggcaaaggaataggat 180
               ||||||||||||||||||||
Sbjct: 1782058 tcatggcaaaggaataggat 1782077

>gb|AC011835.8| Homo sapiens chromosome 8, clone RP11-143D15, complete sequence
          Length = 182151

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    atgcatcatcataaccagac 286
              ||||||||||||||||||||
Sbjct: 175085 atgcatcatcataaccagac 175104

>gb|AC016065.14| Homo sapiens chromosome 8, clone RP11-115C21, complete sequence
          Length = 185463

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    atgcatcatcataaccagac 286
              ||||||||||||||||||||
Sbjct: 149691 atgcatcatcataaccagac 149710

>gb|AC152502.5| Mus musculus BAC clone RP23-415D12 from chromosome 16, complete
             sequence
          Length = 180876

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   agaaccaaggaatggcaaca 215
             ||||||||||||||||||||
Sbjct: 66984 agaaccaaggaatggcaaca 66965

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 19       tcaaaacaaattagaattct 38
                ||||||||||||||||||||
Sbjct: 27728174 tcaaaacaaattagaattct 27728155

>gb|AC109222.14| Mus musculus chromosome 18, clone RP23-251L6, complete sequence
          Length = 201310

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 7    aatcaaaatatctcaaaaca 26
            ||||||||||||||||||||
Sbjct: 7997 aatcaaaatatctcaaaaca 7978

>emb|AL935192.10| Zebrafish DNA sequence from clone CH211-252B2, complete sequence
          Length = 192649

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     aaaacaaattagaattctcc 40
              ||||||||||||||||||||
Sbjct: 111675 aaaacaaattagaattctcc 111694

>gb|AC002525.1|AC002525 Human PAC clone 257C22A from 13q12-q13, complete sequence
          Length = 140942

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 289   gacatgcttcctcgcatggt 308
             ||||||||||||||||||||
Sbjct: 62021 gacatgcttcctcgcatggt 62040

>gb|DP000020.1| Equus caballus target 1 genomic scaffold
          Length = 1907055

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 165    ggcaaaggaataggatagaa 184
              ||||||||||||||||||||
Sbjct: 928595 ggcaaaggaataggatagaa 928614


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,071,311
Number of Sequences: 3902068
Number of extensions: 3071311
Number of successful extensions: 63763
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63663
Number of HSP's gapped (non-prelim): 100
length of query: 337
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 315
effective length of database: 17,147,199,772
effective search space: 5401367928180
effective search space used: 5401367928180
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)