ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl17h02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476056.1| Oryza sativa (japonica cultivar-group), predic... 84 4e-13
2gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome... 84 4e-13
3gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome... 84 4e-13
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
5emb|AL008732.1|HS67M12 Human DNA sequence from clone RP1-67M12 o... 42 1.3
6gb|AC098613.2| Homo sapiens chromosome 3 clone RP11-24F11, compl... 42 1.3
7gb|AC093333.7| Homo sapiens chromosome 8, clone RP11-470N15, com... 42 1.3
8gb|AC104304.2| Homo sapiens chromosome 3 clone RP11-509I21, comp... 42 1.3
9gb|AC162801.2| Mus musculus BAC clone RP24-65E6 from chromosome ... 42 1.3
10gb|AC156798.2| Mus musculus BAC clone RP23-378B3 from chromosome... 42 1.3
11gb|AC025522.7| Homo sapiens chromosome 8, clone RP11-599P7, comp... 42 1.3
12gb|AF508798.1| Homo sapiens lactoferrin gene, exons 1 through 6 ... 42 1.3
13ref|NM_101556.3| Arabidopsis thaliana unknown protein AT1G16950 ... 40 5.1
14gb|AC150752.4| Bos taurus BAC CH240-288E20 (Children's Hospital... 40 5.1
15gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 5.1
16gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 5.1
17gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 5.1
18gb|AC124412.3| Mus musculus BAC clone RP24-274J3 from chromosome... 40 5.1
19emb|AL606489.26| Human DNA sequence from clone RP11-739N20 on ch... 40 5.1
20emb|AL161742.7| Human DNA sequence from clone RP4-597J3 on chrom... 40 5.1
21gb|AC090786.6| Homo sapiens chromosome 8, clone RP11-381G11, com... 40 5.1
22emb|BX927155.1| Corynebacterium glutamicum ATCC 13032, IS finger... 40 5.1
23emb|AL513014.9| Mouse DNA sequence from clone RP23-461O24 on chr... 40 5.1
24dbj|AP001204.1| Rhodococcus equi plasmid pREAT701 DNA, complete ... 40 5.1
25gb|AC112640.3| Homo sapiens 3 BAC RP11-817M15 (Roswell Park Canc... 40 5.1
26dbj|AK134538.1| Mus musculus adult male medulla oblongata cDNA, ... 40 5.1
27gb|AC093926.6| Genomic sequence for Mus musculus, clone RP23-342... 40 5.1
28dbj|AK163880.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 40 5.1
29dbj|AK039271.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 40 5.1
30dbj|AK031928.1| Mus musculus adult male medulla oblongata cDNA, ... 40 5.1
31gb|AC022872.4|AC022872 Homo sapiens chromosome 15, clone RP11-39... 40 5.1
32gb|AC079412.5| Homo sapiens chromosome 16 clone CTD-2302M15, com... 40 5.1
33gb|AF116907.2|AF116907 Rhodococcus equi virulence plasmid, compl... 40 5.1
34dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 40 5.1
35gb|AC048380.12| Homo sapiens chromosome 18, clone RP11-426J5, co... 40 5.1
36gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.1
37gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17... 40 5.1
38gb|AC051629.3|AC051629 Arabidopsis thaliana chromosome I BAC F6I... 40 5.1
39dbj|AK122269.1| Mus musculus mRNA for mKIAA0386 protein 40 5.1
40gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.1
41gb|AF017435.1|AF017435 Methylobacterium extorquens methanol oxid... 40 5.1 
>ref|XM_476056.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3354

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                        
Query: 315  ccctccagttgctccacatcctgagcattatgtacagcagagccatgcacacagtggccg 374
            |||||||||||||||||||||||||||||||||||||||| || | |||||| | |||||
Sbjct: 3112 ccctccagttgctccacatcctgagcattatgtacagcagcgcgacgcacaccgcggccg 3053

                  
Query: 375  agacga 380
            | ||||
Sbjct: 3052 acacga 3047



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 224  accttccagtacttcccgtccccggcgcagcacttgcc 261
            |||||||||||||| ||||| |||||||| ||||||||
Sbjct: 3212 accttccagtacttgccgtcgccggcgcaccacttgcc 3175



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 169  cgacgccgagctgtacttctc 189
            |||||||||||||||||||||
Sbjct: 3267 cgacgccgagctgtacttctc 3247
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>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10,
             complete sequence
          Length = 156772

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                         
Query: 315   ccctccagttgctccacatcctgagcattatgtacagcagagccatgcacacagtggccg 374
             |||||||||||||||||||||||||||||||||||||||| || | |||||| | |||||
Sbjct: 43712 ccctccagttgctccacatcctgagcattatgtacagcagcgcgacgcacaccgcggccg 43653

                   
Query: 375   agacga 380
             | ||||
Sbjct: 43652 acacga 43647



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 224   accttccagtacttcccgtccccggcgcagcacttgcc 261
             |||||||||||||| ||||| |||||||| ||||||||
Sbjct: 43812 accttccagtacttgccgtcgccggcgcaccacttgcc 43775



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 169   cgacgccgagctgtacttctc 189
             |||||||||||||||||||||
Sbjct: 43867 cgacgccgagctgtacttctc 43847
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>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04,
              complete sequence
          Length = 136713

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                          
Query: 315    ccctccagttgctccacatcctgagcattatgtacagcagagccatgcacacagtggccg 374
              |||||||||||||||||||||||||||||||||||||||| || | |||||| | |||||
Sbjct: 131927 ccctccagttgctccacatcctgagcattatgtacagcagcgcgacgcacaccgcggccg 131868

                    
Query: 375    agacga 380
              | ||||
Sbjct: 131867 acacga 131862



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                    
Query: 224    accttccagtacttcccgtccccggcgcagcacttgcc 261
              |||||||||||||| ||||| |||||||| ||||||||
Sbjct: 132027 accttccagtacttgccgtcgccggcgcaccacttgcc 131990



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 169    cgacgccgagctgtacttctc 189
              |||||||||||||||||||||
Sbjct: 132082 cgacgccgagctgtacttctc 132062
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                           
Query: 315     ccctccagttgctccacatcctgagcattatgtacagcagagccatgcacacagtggccg 374
               |||||||||||||||||||||||||||||||||||||||| || | |||||| | |||||
Sbjct: 4157233 ccctccagttgctccacatcctgagcattatgtacagcagcgcgacgcacaccgcggccg 4157174

                     
Query: 375     agacga 380
               | ||||
Sbjct: 4157173 acacga 4157168



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                     
Query: 224     accttccagtacttcccgtccccggcgcagcacttgcc 261
               |||||||||||||| ||||| |||||||| ||||||||
Sbjct: 4157333 accttccagtacttgccgtcgccggcgcaccacttgcc 4157296



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 169     cgacgccgagctgtacttctc 189
               |||||||||||||||||||||
Sbjct: 4157388 cgacgccgagctgtacttctc 4157368
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>emb|AL008732.1|HS67M12 Human DNA sequence from clone RP1-67M12 on chromosome 6p22.1-22.3
             Contains part of a novel gene, complete sequence
          Length = 103268

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 318   tccagttgctccacatcctga 338
             |||||||||||||||||||||
Sbjct: 53759 tccagttgctccacatcctga 53779
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>gb|AC098613.2| Homo sapiens chromosome 3 clone RP11-24F11, complete sequence
          Length = 185437

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 52     acagccacccatacacaaaca 72
              |||||||||||||||||||||
Sbjct: 125559 acagccacccatacacaaaca 125539
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>gb|AC093333.7| Homo sapiens chromosome 8, clone RP11-470N15, complete sequence
          Length = 187680

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 318    tccagttgctccacatcctga 338
              |||||||||||||||||||||
Sbjct: 145465 tccagttgctccacatcctga 145445
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>gb|AC104304.2| Homo sapiens chromosome 3 clone RP11-509I21, complete sequence
          Length = 202933

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 52   acagccacccatacacaaaca 72
            |||||||||||||||||||||
Sbjct: 1416 acagccacccatacacaaaca 1396
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>gb|AC162801.2| Mus musculus BAC clone RP24-65E6 from chromosome 12, complete sequence
          Length = 225198

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 57    cacccatacacaaacattttt 77
             |||||||||||||||||||||
Sbjct: 13462 cacccatacacaaacattttt 13442
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>gb|AC156798.2| Mus musculus BAC clone RP23-378B3 from chromosome 12, complete sequence
          Length = 220547

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 57    cacccatacacaaacattttt 77
             |||||||||||||||||||||
Sbjct: 16245 cacccatacacaaacattttt 16265
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>gb|AC025522.7| Homo sapiens chromosome 8, clone RP11-599P7, complete sequence
          Length = 173270

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 318    tccagttgctccacatcctga 338
              |||||||||||||||||||||
Sbjct: 124938 tccagttgctccacatcctga 124958
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>gb|AF508798.1| Homo sapiens lactoferrin gene, exons 1 through 6 and partial cds
          Length = 19899

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 52   acagccacccatacacaaaca 72
            |||||||||||||||||||||
Sbjct: 5171 acagccacccatacacaaaca 5191
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>ref|NM_101556.3| Arabidopsis thaliana unknown protein AT1G16950 mRNA, complete cds
          Length = 551

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 61  catacacaaacatttttgagaaga 84
           |||||||||||||| |||||||||
Sbjct: 469 catacacaaacattcttgagaaga 446
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>gb|AC150752.4| Bos taurus  BAC CH240-288E20 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 165924

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 318    tccagttgctccacatcctgagca 341
              ||||||||||||||||||| ||||
Sbjct: 132094 tccagttgctccacatcctcagca 132071
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 171     acgccgagctgtacttctcc 190
               ||||||||||||||||||||
Sbjct: 1697490 acgccgagctgtacttctcc 1697509
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 171     acgccgagctgtacttctcc 190
               ||||||||||||||||||||
Sbjct: 1527150 acgccgagctgtacttctcc 1527169
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 171     acgccgagctgtacttctcc 190
               ||||||||||||||||||||
Sbjct: 4391754 acgccgagctgtacttctcc 4391735
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>gb|AC124412.3| Mus musculus BAC clone RP24-274J3 from chromosome 9, complete sequence
          Length = 175945

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     tttttgagaagaaaccacag 92
              ||||||||||||||||||||
Sbjct: 168367 tttttgagaagaaaccacag 168386
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>emb|AL606489.26| Human DNA sequence from clone RP11-739N20 on chromosome 1 Contains the
             5' end of the gene for phosphoinositol 3-phosphate-binding
             protein-3 (PEPP3), two novel genes, the  PPP1R15B gene for
             protein phosphatase 1, regulatory (inhibitor) subunit 15B,
             the PIK3C2B gene for phosphoinositide-3-kinase, class 2,
             beta polypeptide, a small nuclear ribonucleoprotein
             polypeptide F (SNRPF) pseudogene and three CpG islands,
             complete sequence
          Length = 167079

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 317   ctccagttgctccacatcct 336
             ||||||||||||||||||||
Sbjct: 47636 ctccagttgctccacatcct 47617
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>emb|AL161742.7| Human DNA sequence from clone RP4-597J3 on chromosome 1p32.1-32.3
             Contains the 5' end of the ROR1 gene for receptor tyrosine
             kinase-like orphan receptor 1, a ribosomal protein L19
             (RPL19) pseudogene, a cofilin 1 (non-muscle) (CFL1)
             pseudogene and a CpG island, complete sequence
          Length = 114409

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   tccagttgctccacatcctg 337
             ||||||||||||||||||||
Sbjct: 19295 tccagttgctccacatcctg 19314
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>gb|AC090786.6| Homo sapiens chromosome 8, clone RP11-381G11, complete sequence
          Length = 188274

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 317    ctccagttgctccacatcct 336
              ||||||||||||||||||||
Sbjct: 180689 ctccagttgctccacatcct 180670
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>emb|BX927155.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete
              genome; segment 8/10
          Length = 349136

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 226    cttccagtacttcccgtccc 245
              ||||||||||||||||||||
Sbjct: 133877 cttccagtacttcccgtccc 133858
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>emb|AL513014.9| Mouse DNA sequence from clone RP23-461O24 on chromosome 13 Contains the
             5' end of the gene for a novel protein similar to C6orf32
             (KIAA0386, DIFF48), complete sequence
          Length = 80460

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 267   tgccgtgcacctccggctcc 286
             ||||||||||||||||||||
Sbjct: 11955 tgccgtgcacctccggctcc 11936
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>dbj|AP001204.1| Rhodococcus equi plasmid pREAT701 DNA, complete sequence
          Length = 80610

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   acgctgctctccgacgccga 177
             ||||||||||||||||||||
Sbjct: 54339 acgctgctctccgacgccga 54320
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>gb|AC112640.3| Homo sapiens 3 BAC RP11-817M15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 211335

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 318    tccagttgctccacatcctg 337
              ||||||||||||||||||||
Sbjct: 205754 tccagttgctccacatcctg 205773
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>dbj|AK134538.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
           enriched library, clone:6330405L09 product:neurotrophic
           tyrosine kinase, receptor, type 2, full insert sequence
          Length = 5528

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 tgccgtgcacctccggctcc 286
           ||||||||||||||||||||
Sbjct: 138 tgccgtgcacctccggctcc 119
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>gb|AC093926.6| Genomic sequence for Mus musculus, clone RP23-342N3, complete sequence
          Length = 210913

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    tttttgagaagaaaccacag 92
             ||||||||||||||||||||
Sbjct: 59070 tttttgagaagaaaccacag 59089
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>dbj|AK163880.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:C230006N14 product:Diff48
           protein homolog [Homo sapiens], full insert sequence
          Length = 1351

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 tgccgtgcacctccggctcc 286
           ||||||||||||||||||||
Sbjct: 143 tgccgtgcacctccggctcc 124
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>dbj|AK039271.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length
           enriched library, clone:A330012A19 product:hypothetical
           protein, full insert sequence
          Length = 2550

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 tgccgtgcacctccggctcc 286
           ||||||||||||||||||||
Sbjct: 172 tgccgtgcacctccggctcc 153
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>dbj|AK031928.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
           enriched library, clone:6330500D04 product:DJ245M18.1
           (PLACENTAL PROTEIN DIFF40) (FRAGMENT) homolog [Homo
           sapiens], full insert sequence
          Length = 3370

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 tgccgtgcacctccggctcc 286
           ||||||||||||||||||||
Sbjct: 160 tgccgtgcacctccggctcc 141
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>gb|AC022872.4|AC022872 Homo sapiens chromosome 15, clone RP11-390D11, complete sequence
          Length = 181923

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 317    ctccagttgctccacatcct 336
              ||||||||||||||||||||
Sbjct: 118417 ctccagttgctccacatcct 118398
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>gb|AC079412.5| Homo sapiens chromosome 16 clone CTD-2302M15, complete sequence
          Length = 104704

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   tccagttgctccacatcctg 337
             ||||||||||||||||||||
Sbjct: 42939 tccagttgctccacatcctg 42958
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>gb|AF116907.2|AF116907 Rhodococcus equi virulence plasmid, complete sequence
          Length = 80609

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   acgctgctctccgacgccga 177
             ||||||||||||||||||||
Sbjct: 54338 acgctgctctccgacgccga 54319
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>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 226     cttccagtacttcccgtccc 245
               ||||||||||||||||||||
Sbjct: 2606703 cttccagtacttcccgtccc 2606684
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>gb|AC048380.12| Homo sapiens chromosome 18, clone RP11-426J5, complete sequence
          Length = 224670

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 317   ctccagttgctccacatcct 336
             ||||||||||||||||||||
Sbjct: 79449 ctccagttgctccacatcct 79430
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 171     acgccgagctgtacttctcc 190
               ||||||||||||||||||||
Sbjct: 4111372 acgccgagctgtacttctcc 4111353
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>gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17F16 genomic sequence,
            complete sequence
          Length = 90498

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 61   catacacaaacatttttgagaaga 84
            |||||||||||||| |||||||||
Sbjct: 4459 catacacaaacattcttgagaaga 4482
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>gb|AC051629.3|AC051629 Arabidopsis thaliana chromosome I BAC F6I1 genomic sequence, complete
             sequence
          Length = 93677

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 61    catacacaaacatttttgagaaga 84
             |||||||||||||| |||||||||
Sbjct: 51156 catacacaaacattcttgagaaga 51179
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>dbj|AK122269.1| Mus musculus mRNA for mKIAA0386 protein
          Length = 5528

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 tgccgtgcacctccggctcc 286
           ||||||||||||||||||||
Sbjct: 139 tgccgtgcacctccggctcc 120
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 273     gcacctccggctcctcgccgtccg 296
               |||||||| |||||||||||||||
Sbjct: 1474348 gcacctccagctcctcgccgtccg 1474371
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>gb|AF017435.1|AF017435 Methylobacterium extorquens methanol oxidation genes, glmU-like gene,
            partial cds, and orfL2, orfL1, orfR genes, complete cds
          Length = 4301

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 268  gccgtgcacctccggctcct 287
            ||||||||||||||||||||
Sbjct: 2197 gccgtgcacctccggctcct 2216


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,069,559
Number of Sequences: 3902068
Number of extensions: 3069559
Number of successful extensions: 65693
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65400
Number of HSP's gapped (non-prelim): 293
length of query: 382
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 360
effective length of database: 17,147,199,772
effective search space: 6172991917920
effective search space used: 6172991917920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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