ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl17g10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VKGC_RAT (O88496) Vitamin K-dependent gamma-carboxylase (EC 6.4.... 34 0.11
2VKGC_MOUSE (Q9QYC7) Vitamin K-dependent gamma-carboxylase (EC 6.... 32 0.31
3VKGC_PONPY (Q5RF50) Vitamin K-dependent gamma-carboxylase (EC 6.... 30 1.5
4VKGC_HUMAN (P38435) Vitamin K-dependent gamma-carboxylase (EC 6.... 30 1.5
5PDI1_CAEEL (Q17967) Protein disulfide-isomerase 1 precursor (EC ... 30 1.5
6VKGC_DELLE (Q9MYY3) Vitamin K-dependent gamma-carboxylase (EC 6.... 28 5.8
7YIV5_YEAST (P40579) Putative oxidoreductase YIR035C (EC 1.-.-.-) 28 5.8
8INVB_DAUCA (P80065) Beta-fructofuranosidase, soluble isoenzyme I... 28 7.6
9TSP4_RAT (P49744) Thrombospondin-4 precursor 28 7.6
10SECY_BUCAP (Q8K969) Preprotein translocase secY subunit 28 7.6
11LPHN2_BOVIN (O97817) Latrophilin-2 precursor (Calcium-independen... 27 10.0
12LPHN2_RAT (O88923) Latrophilin-2 precursor (Calcium-independent ... 27 10.0

>VKGC_RAT (O88496) Vitamin K-dependent gamma-carboxylase (EC 6.4.-.-)|
           (Gamma-glutamyl carboxylase) (Vitamin K gamma glutamyl
           carboxylase)
          Length = 758

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 18/41 (43%), Positives = 21/41 (51%)
 Frame = -3

Query: 175 LEKEATPRPL*MCVYKK*RKTAGIVPSMPAFSGKKFAFLYL 53
           L  +A PRP   CVYK+ R  AG  P +    G  F  LYL
Sbjct: 331 LPAKAAPRPSASCVYKRARAKAGQKPGLRHHLGTVFTLLYL 371



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>VKGC_MOUSE (Q9QYC7) Vitamin K-dependent gamma-carboxylase (EC 6.4.-.-)|
           (Gamma-glutamyl carboxylase) (Vitamin K gamma glutamyl
           carboxylase)
          Length = 757

 Score = 32.3 bits (72), Expect = 0.31
 Identities = 18/41 (43%), Positives = 21/41 (51%)
 Frame = -3

Query: 175 LEKEATPRPL*MCVYKK*RKTAGIVPSMPAFSGKKFAFLYL 53
           L  +A PRP   CVYK+ R  AG  P +    G  F  LYL
Sbjct: 331 LPTKAAPRPSASCVYKRSRGKAGPKPGLRHQLGAIFTLLYL 371



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>VKGC_PONPY (Q5RF50) Vitamin K-dependent gamma-carboxylase (EC 6.4.-.-)|
           (Gamma-glutamyl carboxylase) (Vitamin K gamma glutamyl
           carboxylase)
          Length = 758

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 175 LEKEATPRPL*MCVYKK*RKTAGIVPSMPAFSGKKFAFLYL 53
           L  +A P+P   CVYK+ R  +G  P +    G  F  LYL
Sbjct: 331 LPLKAAPQPSVSCVYKRSRGKSGQKPGLRHQLGAAFTLLYL 371



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>VKGC_HUMAN (P38435) Vitamin K-dependent gamma-carboxylase (EC 6.4.-.-)|
           (Gamma-glutamyl carboxylase) (Vitamin K gamma glutamyl
           carboxylase)
          Length = 758

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 175 LEKEATPRPL*MCVYKK*RKTAGIVPSMPAFSGKKFAFLYL 53
           L  +A P+P   CVYK+ R  +G  P +    G  F  LYL
Sbjct: 331 LPLKAAPQPSVSCVYKRSRGKSGQKPGLRHQLGAAFTLLYL 371



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>PDI1_CAEEL (Q17967) Protein disulfide-isomerase 1 precursor (EC 5.3.4.1) (PDI|
           1) (Prolyl 4-hydroxylase beta 1 subunit)
          Length = 485

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +1

Query: 94  WMELYQLSFFTSYTHTSTEAGASPPFLKKTHTSTICKTGKSANQYIPKDSRMKK 255
           W+  Y+LS  T +TH S +       LKK H   I K+  S ++ I K + + K
Sbjct: 228 WLHAYKLSAVTEFTHESAQEIVGGD-LKKFHFLIIRKSDSSFDETIAKFTEVAK 280



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>VKGC_DELLE (Q9MYY3) Vitamin K-dependent gamma-carboxylase (EC 6.4.-.-)|
           (Gamma-glutamyl carboxylase) (Vitamin K gamma glutamyl
           carboxylase)
          Length = 758

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = -3

Query: 175 LEKEATPRPL*MCVYKK*RKTAGIVPSMPAFSGKKFAFLYL 53
           L     P+P   CVYK+ R   G  P +    G  F  LYL
Sbjct: 331 LPLRTAPQPSASCVYKRSRAKGGQKPGLRHRLGAAFTLLYL 371



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>YIV5_YEAST (P40579) Putative oxidoreductase YIR035C (EC 1.-.-.-)|
          Length = 254

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +1

Query: 91  AWMELYQLSFFTSYTHTSTEAGASPPFLKKTHTSTICKTGKSANQY 228
           AW +LY ++FF+      +  G + P LKKT+ + +  +  + N Y
Sbjct: 102 AWKKLYDINFFS----IVSLVGIALPELKKTNGNVVFVSSDACNMY 143



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>INVB_DAUCA (P80065) Beta-fructofuranosidase, soluble isoenzyme I precursor (EC|
           3.2.1.26) (Sucrose hydrolase) (Invertase) (Saccharase)
          Length = 661

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -2

Query: 248 ILESFGIYWLADLPVLQIVDVCVFFRKGGDAPASVDVC 135
           IL  FGI  LAD P+ ++  V  +  KG D  A    C
Sbjct: 524 ILGPFGILVLADDPLSELTPVYFYIAKGVDGNAKTYFC 561



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>TSP4_RAT (P49744) Thrombospondin-4 precursor|
          Length = 980

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 68  KLFATEGRHGWNYTSCLSLLLIHTHLQ 148
           KL  T+G   W+ T C + LL+H  LQ
Sbjct: 9   KLTLTKGNKSWSSTRCGAFLLLHLVLQ 35



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>SECY_BUCAP (Q8K969) Preprotein translocase secY subunit|
          Length = 439

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +3

Query: 9   KIFIHLGLSSYCGTVRYRKANFLPLKAGMDGTIPAVF 119
           KI IH         +   ++  LPLK  M G IPA+F
Sbjct: 243 KIIIHYAQRQKGRRIYSTQSTHLPLKINMAGVIPAIF 279



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>LPHN2_BOVIN (O97817) Latrophilin-2 precursor (Calcium-independent|
            alpha-latrotoxin receptor 2)
          Length = 1478

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 193  TICKTGKSANQYIPKDSRMKKIISPSISSGQYN 291
            T+CK  K +N   P  SR++ I +  +  G YN
Sbjct: 1016 TLCKMVKHSNTLKPDSSRLENINNYRVCDGYYN 1048



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>LPHN2_RAT (O88923) Latrophilin-2 precursor (Calcium-independent|
            alpha-latrotoxin receptor 2) (CIRL-2)
          Length = 1487

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 193  TICKTGKSANQYIPKDSRMKKIISPSISSGQYN 291
            T+CK  K +N   P  SR++ I +  +  G YN
Sbjct: 1016 TLCKMVKHSNTLKPDSSRLENINNYRVCDGYYN 1048


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,902,368
Number of Sequences: 219361
Number of extensions: 934366
Number of successful extensions: 2202
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2201
length of database: 80,573,946
effective HSP length: 79
effective length of database: 63,244,427
effective search space used: 1517866248
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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