>gb|AC104049.4| Homo sapiens chromosome 8, clone CTD-2313B19, complete sequence
          Length = 129819

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 2    tttttcccgcaaaataccattgaaaa 27
            |||||||| |||||||||||||||||
Sbjct: 4190 tttttcccccaaaataccattgaaaa 4215

>gb|AC090740.5| Homo sapiens chromosome 8, clone RP11-595O22, complete sequence
          Length = 184838

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 2      tttttcccgcaaaataccattgaaaa 27
              |||||||| |||||||||||||||||
Sbjct: 109766 tttttcccccaaaataccattgaaaa 109791

>gb|AC133496.3| Mus musculus BAC clone RP24-386G2 from chromosome 13, complete sequence
          Length = 173924

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 206    atcaaggacaaacagcttcta 226
              |||||||||||||||||||||
Sbjct: 100022 atcaaggacaaacagcttcta 100042

>gb|AC004106.1| Homo sapiens Xp22 BAC GSHB-45N23 (Genome Systems Human BAC library)
             complete sequence
          Length = 190482

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    aaaacagcaagtgccaagttt 46
             |||||||||||||||||||||
Sbjct: 23881 aaaacagcaagtgccaagttt 23901

>emb|CR391919.5| Zebrafish DNA sequence from clone DKEY-174K18 in linkage group 1,
              complete sequence
          Length = 179764

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 117    aaataatatggcaaaataaaaatca 141
              |||||||||||||||| ||||||||
Sbjct: 162368 aaataatatggcaaaaaaaaaatca 162344

>emb|CR848522.2| Xenopus tropicalis finished cDNA, clone TEgg030d13
          Length = 2810

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 31   agcaagtgccaagtttttcac 51
            |||||||||||||||||||||
Sbjct: 2345 agcaagtgccaagtttttcac 2325

>gb|AC163659.4| Mus musculus BAC clone RP24-294C10 from chromosome 1, complete sequence
          Length = 75142

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 325   ctttgcaagtaagcaaatat 344
             ||||||||||||||||||||
Sbjct: 42930 ctttgcaagtaagcaaatat 42949

>gb|AC147025.2| Pan troglodytes BAC clone RP43-92C7 from 7, complete sequence
          Length = 142948

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   actaaataatatggcaaaat 133
             ||||||||||||||||||||
Sbjct: 43800 actaaataatatggcaaaat 43819

>gb|AC118012.9| Mus musculus chromosome 8, clone RP23-454D11, complete sequence
          Length = 192971

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 231    aaaatgaaatgcagacctct 250
              ||||||||||||||||||||
Sbjct: 130077 aaaatgaaatgcagacctct 130058

>gb|AC108097.3| Homo sapiens chromosome 16 clone RP11-109P11, complete sequence
          Length = 181387

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   agtctaagggcctatcaagg 212
             ||||||||||||||||||||
Sbjct: 64710 agtctaagggcctatcaagg 64691

>gb|AC004885.2| Homo sapiens PAC clone RP4-781A18 from 7, complete sequence
          Length = 190842

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   actaaataatatggcaaaat 133
             ||||||||||||||||||||
Sbjct: 59234 actaaataatatggcaaaat 59253

>gb|AF022967.1| Caenorhabditis elegans cosmid C13A2, complete sequence
          Length = 35348

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 112   agactaaataatatggcaaaataa 135
             |||||||||||||||| |||||||
Sbjct: 16664 agactaaataatatggtaaaataa 16641

>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence
          Length = 984602

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    aaaataaaaatcagataggt 148
              ||||||||||||||||||||
Sbjct: 172503 aaaataaaaatcagataggt 172522

>emb|CR392340.11| Zebrafish DNA sequence from clone DKEY-23G12 in linkage group 20,
              complete sequence
          Length = 247887

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    caaacagcttctacaggaaa 233
              ||||||||||||||||||||
Sbjct: 177471 caaacagcttctacaggaaa 177490

>gb|AC114294.2| Homo sapiens chromosome 5 clone RP11-114J22, complete sequence
          Length = 69490

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   ataatatggcaaaataaaaa 138
             ||||||||||||||||||||
Sbjct: 45541 ataatatggcaaaataaaaa 45560

>gb|AC093165.5| Homo sapiens BAC clone RP11-1255P17 from 2, complete sequence
          Length = 163772

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   cctatcaaggacaaacagct 222
             ||||||||||||||||||||
Sbjct: 36898 cctatcaaggacaaacagct 36917

>emb|CT030256.13| Mouse DNA sequence from clone RP23-346K5 on chromosome 13, complete
             sequence
          Length = 197972

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    tggaactaggaatcaaaaga 99
             ||||||||||||||||||||
Sbjct: 77570 tggaactaggaatcaaaaga 77589

>emb|BX649436.12| Zebrafish DNA sequence from clone DKEYP-50F7 in linkage group 20,
            complete sequence
          Length = 99233

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 214  caaacagcttctacaggaaa 233
            ||||||||||||||||||||
Sbjct: 5554 caaacagcttctacaggaaa 5573

>dbj|AP003395.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-305N23, complete
              sequences
          Length = 205596

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 276    cagttgaattcaaccaacct 295
              ||||||||||||||||||||
Sbjct: 174916 cagttgaattcaaccaacct 174897

>dbj|AP003393.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-196E1, complete
             sequences
          Length = 174303

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 276   cagttgaattcaaccaacct 295
             ||||||||||||||||||||
Sbjct: 54164 cagttgaattcaaccaacct 54145

>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 119     ataatatggcaaaataaaaatcag 142
               ||||||| ||||||||||||||||
Sbjct: 4385352 ataatattgcaaaataaaaatcag 4385329

>emb|BX465849.10| Zebrafish DNA sequence from clone DKEY-263L8 in linkage group 1,
             complete sequence
          Length = 136195

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   aaataatatggcaaaataaa 136
             ||||||||||||||||||||
Sbjct: 14302 aaataatatggcaaaataaa 14321

>emb|AL163171.4|CNS01RIF Human chromosome 14 DNA sequence BAC R-406A9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 148578

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   gcaaaataaaaatcagatag 146
             ||||||||||||||||||||
Sbjct: 92450 gcaaaataaaaatcagatag 92469

>emb|AL355095.4|CNS05TCE Human chromosome 14 DNA sequence BAC R-11K13 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 153099

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 127  gcaaaataaaaatcagatag 146
            ||||||||||||||||||||
Sbjct: 9959 gcaaaataaaaatcagatag 9978

>gb|AC164877.2| Mus musculus BAC clone RP24-340N21 from chromosome 13, complete
             sequence
          Length = 179184

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    tggaactaggaatcaaaaga 99
             ||||||||||||||||||||
Sbjct: 77447 tggaactaggaatcaaaaga 77466

>emb|AL445385.4|CNS07ED1 Human chromosome 14 DNA sequence BAC R-126I9 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 163784

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 112    agactaaataatatggcaaaataaaaat 139
              ||||||||||||||  ||||||||||||
Sbjct: 110159 agactaaataatatcacaaaataaaaat 110186


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,164,254
Number of Sequences: 3902068
Number of extensions: 4164254
Number of successful extensions: 76949
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76865
Number of HSP's gapped (non-prelim): 84
length of query: 357
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 335
effective length of database: 17,147,199,772
effective search space: 5744311923620
effective search space used: 5744311923620
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)