Clone Name | rbastl17g05 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TAGC_DICDI (Q23868) Prestalk-specific protein tagC precursor (EC... | 27 | 9.3 | 2 | TRI38_HUMAN (O00635) Tripartite motif protein 38 (RING finger pr... | 27 | 9.3 |
---|
>TAGC_DICDI (Q23868) Prestalk-specific protein tagC precursor (EC 3.4.21.-)| Length = 1743 Score = 27.3 bits (59), Expect = 9.3 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = +1 Query: 220 ISPVILHVLSSRNQRN*NNG 279 ISP++L +L++ N N NNG Sbjct: 85 ISPILLRILNNNNNNNNNNG 104
>TRI38_HUMAN (O00635) Tripartite motif protein 38 (RING finger protein 15) (Zinc| finger protein RoRet) Length = 465 Score = 27.3 bits (59), Expect = 9.3 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +1 Query: 40 CYNCERARNNRAHTMATAEQV 102 C+ CERA ++ HT A E V Sbjct: 112 CWRCERAPQHKGHTTALVEDV 132 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,949,290 Number of Sequences: 219361 Number of extensions: 1167759 Number of successful extensions: 1888 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1864 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1888 length of database: 80,573,946 effective HSP length: 97 effective length of database: 59,295,929 effective search space used: 1423102296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)