Clone Name | rbastl17f10 |
---|---|
Clone Library Name | barley_pub |
>WDR3_HUMAN (Q9UNX4) WD-repeat protein 3| Length = 943 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = -3 Query: 284 CTRRFYNSRGKKRFCDSFGHMFPLLYRLISHDGSRP*EGAHDRS 153 CT + + K F +GH P++ ISHDG+ G+ DR+ Sbjct: 571 CTVKIFYVDTLKFFLSLYGHKLPVICMDISHDGALIATGSADRN 614
>SIA1_YEAST (Q12212) Protein SIA1 precursor| Length = 622 Score = 30.0 bits (66), Expect = 1.5 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%) Frame = -1 Query: 256 GRRGFAILLVICFHF-CID*SVTMVADLRRAHTID 155 G+R F IL + FHF C D S+T++ +++ + ID Sbjct: 306 GQRSFKILQITDFHFKCTDNSMTVINEIKTVNFID 340
>ZC3H6_MOUSE (Q8BYK8) Zinc finger CCCH-type domain-containing protein 6| Length = 1177 Score = 28.9 bits (63), Expect = 3.4 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = -2 Query: 318 GYCRKGSSCSYVHTSF 271 GYC KG +C Y+H+ F Sbjct: 311 GYCTKGENCIYMHSEF 326
>ZC3H6_HUMAN (P61129) Zinc finger CCCH-type domain-containing protein 6| Length = 1189 Score = 28.5 bits (62), Expect = 4.4 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -2 Query: 318 GYCRKGSSCSYVHTSF 271 GYC KG +C Y+H F Sbjct: 313 GYCTKGENCIYMHNEF 328
>PEPX_STRA5 (Q8DXW0) Xaa-Pro dipeptidyl-peptidase (EC 3.4.14.11) (X-Pro| dipeptidyl-peptidase) (X-prolyl-dipeptidyl aminopeptidase) (X-PDAP) Length = 761 Score = 27.7 bits (60), Expect = 7.6 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 10/49 (20%) Frame = +2 Query: 23 IQFHWNTAVAPTTDKSTLGKHSSHFP----------MLEIHIYTWYSYY 139 ++ +W+ + TT KS LG S+ + E I TWY YY Sbjct: 332 VKANWSNGLVATTGKSYLGTMSTGLATTGVEGLKVIIAEAAISTWYDYY 380
>ZC3H8_MOUSE (Q9JJ48) Zinc finger CCCH-type domain-containing protein 8 (Fetal| liver zinc finger protein 1) Length = 305 Score = 27.7 bits (60), Expect = 7.6 Identities = 8/16 (50%), Positives = 12/16 (75%) Frame = -2 Query: 318 GYCRKGSSCSYVHTSF 271 GYC KG +C Y+H+ + Sbjct: 246 GYCTKGENCLYLHSEY 261 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,586,030 Number of Sequences: 219361 Number of extensions: 968277 Number of successful extensions: 2111 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2012 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2111 length of database: 80,573,946 effective HSP length: 81 effective length of database: 62,805,705 effective search space used: 1507336920 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)