Clone Name | rbastl17f07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CWF19_SCHPO (Q09909) Cell cycle control protein cwf19 | 29 | 2.5 | 2 | VGF_HUMAN (O15240) Neurosecretory protein VGF precursor | 28 | 7.3 | 3 | LRCH1_HUMAN (Q9Y2L9) Leucine-rich repeats and calponin homology ... | 28 | 7.3 | 4 | PKNA2_BIFLO (Q8G4G1) Probable serine/threonine-protein kinase pk... | 27 | 9.5 |
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>CWF19_SCHPO (Q09909) Cell cycle control protein cwf19| Length = 639 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = +1 Query: 277 NQTGCETFHPGTENHHHSRHGNPGH 351 N+T ET H HHHSRH H Sbjct: 16 NETDRETNHSRRHRHHHSRHRESKH 40
>VGF_HUMAN (O15240) Neurosecretory protein VGF precursor| Length = 616 Score = 27.7 bits (60), Expect = 7.3 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = +3 Query: 252 PLPSPLDEEPDWLRDLPSWN 311 P PS DE PDW LP W+ Sbjct: 512 PPPSARDELPDWNEVLPPWD 531
>LRCH1_HUMAN (Q9Y2L9) Leucine-rich repeats and calponin homology| domain-containing protein 1 (Calponin homology domain-containing protein 1) (Neuronal protein 81) (NP81) Length = 728 Score = 27.7 bits (60), Expect = 7.3 Identities = 9/18 (50%), Positives = 10/18 (55%) Frame = +1 Query: 301 HPGTENHHHSRHGNPGHP 354 HP +HHH HG G P Sbjct: 25 HPHHHHHHHQHHGGTGAP 42
>PKNA2_BIFLO (Q8G4G1) Probable serine/threonine-protein kinase pknA2 (EC| 2.7.11.1) Length = 757 Score = 27.3 bits (59), Expect = 9.5 Identities = 9/16 (56%), Positives = 11/16 (68%), Gaps = 2/16 (12%) Frame = -3 Query: 326 WWWFSVPG--WKVSQP 285 WWWF+ PG W V +P Sbjct: 445 WWWFAGPGSYWSVPKP 460 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,925,264 Number of Sequences: 219361 Number of extensions: 852771 Number of successful extensions: 2571 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2472 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2561 length of database: 80,573,946 effective HSP length: 93 effective length of database: 60,173,373 effective search space used: 1444160952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)