ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl17e11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC153930.2| Mus musculus 10 BAC RP24-461H14 (Roswell Park Can... 46 0.033
2gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 geno... 44 0.13
3gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2,... 42 0.51
4dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.51
5dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.51
6dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.51
7emb|AL670175.12| Mouse DNA sequence from clone RP23-309K20 on ch... 42 0.51
8gb|AC113122.9| Mus musculus chromosome 8, clone RP23-349P4, comp... 40 2.0
9gb|AC125339.4| Mus musculus BAC clone RP24-356P17 from chromosom... 40 2.0
10emb|Z95310.1|CEH40L08 Caenorhabditis elegans Fosmid H40L08, comp... 40 2.0
11gb|AC090123.68| Mus musculus strain C57BL/6J clone rp23-323l3 ma... 40 2.0
12ref|NM_079456.2| Drosophila melanogaster Soluble NSF attachment ... 40 2.0
13gb|AC009839.10| Drosophila melanogaster 3L BAC RP98-16G9 (Roswel... 40 2.0
14gb|AC093260.2| Homo sapiens chromosome 5 clone RP11-237B16, comp... 40 2.0
15gb|AC138310.3| Mus musculus BAC clone RP23-205H21 from chromosom... 40 2.0
16gb|AC083783.8| Homo sapiens chromosome 17, clone RP11-462C21, co... 40 2.0
17gb|AC092960.3| Homo sapiens 3 BAC RP11-393B14 (Roswell Park Canc... 40 2.0
18gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, comp... 40 2.0
19gb|AY069477.1| Drosophila melanogaster LD21601 full insert cDNA 40 2.0
20emb|AL583742.2|CNS07EFV Human chromosome 14 DNA sequence BAC R-3... 40 2.0
21gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71... 40 2.0
22gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.40... 40 2.0
23gb|U09374.1|DMU09374 Drosophila melanogaster soluble NSF attachm... 40 2.0
24emb|AL691423.14| Mouse DNA sequence from clone RP23-21D3 on chro... 40 2.0
25ref|NM_121173.2| Arabidopsis thaliana catalytic AT5G11350 mRNA, ... 38 8.0
26gb|AC165258.2| Mus musculus BAC clone RP23-127F20 from chromosom... 38 8.0
27ref|NM_191752.1| Oryza sativa (japonica cultivar-group), predic... 38 8.0
28gb|AC139934.9| Mus musculus chromosome 12, clone RP23-39G14, com... 38 8.0
29gb|AC024168.5| Homo sapiens chromosome 3 clone RP11-622P3 map 3p... 38 8.0
30gb|AC115785.9| Mus musculus chromosome 12, clone RP23-170K17, co... 38 8.0
31gb|AC006151.4| Homo sapiens BAC clone GS1-286B23 from 7, complet... 38 8.0
32emb|AL627143.13| Human DNA sequence from clone RP11-14O9 on chro... 38 8.0
33emb|AL606843.16| Human DNA sequence from clone RP11-94F13 on chr... 38 8.0
34emb|AL590115.7| Human DNA sequence from clone RP11-255O17 on chr... 38 8.0
35gb|AY143977.1| Arabidopsis thaliana At5g11350/F2I11_240 mRNA, co... 38 8.0
36emb|AL050307.13|HSDJ689N3 Human DNA sequence from clone RP4-689N... 38 8.0
37emb|AL360314.1|ATF2I11 Arabidopsis thaliana DNA chromosome 5, BA... 38 8.0
38emb|CR352217.9| Zebrafish DNA sequence from clone CH211-129P13 i... 38 8.0
39gb|AC116991.2| Homo sapiens chromosome 3 clone RP11-264M9, compl... 38 8.0
40gb|AC024474.8| Homo sapiens chromosome 15, clone RP11-686I6, com... 38 8.0
41gb|AC096642.2| Homo sapiens chromosome 1 clone RP11-392O17, comp... 38 8.0
42gb|AY069916.1| Arabidopsis thaliana At5g11350/F2I11_240 mRNA, co... 38 8.0
43dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.0
44dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.0
45dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.0
46gb|AC073902.3| Homo sapiens BAC clone RP11-228F17 from 2, comple... 38 8.0
47gb|AC129947.4| Branchiostoma floridae, clone -36D2, complete seq... 38 8.0
48dbj|AK065152.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.0
49emb|BX914195.11| Zebrafish DNA sequence from clone CH211-170L6 i... 38 8.0
50gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 38 8.0
51dbj|AP006296.1| Homo sapiens genomic DNA, chromosome 11 clone:RP... 38 8.0
52gb|AC090944.2| Homo sapiens chromosome 3 clone RP11-238A9 map 3p... 38 8.0
53emb|AL845166.8| Mouse DNA sequence from clone RP23-236H15 on chr... 38 8.0
54gb|AC171730.1| Lycopersicon esculentum chromosome 01 clone C01HB... 38 8.0
55gb|AC127522.7| Homo sapiens chromosome 15, clone RP13-126C7, com... 38 8.0 
>gb|AC153930.2| Mus musculus 10 BAC RP24-461H14 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 186915

 Score = 46.1 bits (23), Expect = 0.033
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 6      tttgaattttctataaatgtgacatca 32
              |||||| ||||||||||||||||||||
Sbjct: 132214 tttgaaatttctataaatgtgacatca 132188
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>gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 genomic sequence, complete
             sequence
          Length = 121915

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 4     catttgaattttctataaatgt 25
             ||||||||||||||||||||||
Sbjct: 75708 catttgaattttctataaatgt 75687
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>gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2, complete sequence
          Length = 81567

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 5     atttgaattttctataaatgt 25
             |||||||||||||||||||||
Sbjct: 74176 atttgaattttctataaatgt 74196
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 59      tatcaacttccaaacaaaaat 79
               |||||||||||||||||||||
Sbjct: 9829802 tatcaacttccaaacaaaaat 9829822
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>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0456E06
          Length = 164353

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 59     tatcaacttccaaacaaaaat 79
              |||||||||||||||||||||
Sbjct: 120044 tatcaacttccaaacaaaaat 120064
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>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0063H02
          Length = 152326

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 59    tatcaacttccaaacaaaaat 79
             |||||||||||||||||||||
Sbjct: 26437 tatcaacttccaaacaaaaat 26457
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>emb|AL670175.12| Mouse DNA sequence from clone RP23-309K20 on chromosome 4, complete
              sequence
          Length = 168158

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 21     aatgtgacatcaccaccatcc 41
              |||||||||||||||||||||
Sbjct: 140982 aatgtgacatcaccaccatcc 141002
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>gb|AC113122.9| Mus musculus chromosome 8, clone RP23-349P4, complete sequence
          Length = 203728

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     ccatttgaattttctataaa 22
             ||||||||||||||||||||
Sbjct: 23208 ccatttgaattttctataaa 23189
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>gb|AC125339.4| Mus musculus BAC clone RP24-356P17 from chromosome 17, complete
             sequence
          Length = 156282

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    aacttccaaacaaaaatgcc 82
             ||||||||||||||||||||
Sbjct: 16747 aacttccaaacaaaaatgcc 16766
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>emb|Z95310.1|CEH40L08 Caenorhabditis elegans Fosmid H40L08, complete sequence
          Length = 15122

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   aacttccaaacaaaaatgcc 82
            ||||||||||||||||||||
Sbjct: 3649 aacttccaaacaaaaatgcc 3668
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>gb|AC090123.68| Mus musculus strain C57BL/6J clone rp23-323l3 map 7, complete sequence
          Length = 223438

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   actcaaaagctctgcctgat 130
             ||||||||||||||||||||
Sbjct: 54443 actcaaaagctctgcctgat 54462
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>ref|NM_079456.2| Drosophila melanogaster Soluble NSF attachment protein CG6625-RA
            (Snap), mRNA
          Length = 2069

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 9    gaattttctataaatgtgac 28
            ||||||||||||||||||||
Sbjct: 1762 gaattttctataaatgtgac 1743
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>gb|AC009839.10| Drosophila melanogaster 3L BAC RP98-16G9 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 185918

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      gaattttctataaatgtgac 28
              ||||||||||||||||||||
Sbjct: 106242 gaattttctataaatgtgac 106223
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>gb|AC093260.2| Homo sapiens chromosome 5 clone RP11-237B16, complete sequence
          Length = 168521

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 11   attttctataaatgtgacat 30
            ||||||||||||||||||||
Sbjct: 1961 attttctataaatgtgacat 1980
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>gb|AC138310.3| Mus musculus BAC clone RP23-205H21 from chromosome 17, complete sequence
          Length = 195483

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     aacttccaaacaaaaatgcc 82
              ||||||||||||||||||||
Sbjct: 160602 aacttccaaacaaaaatgcc 160621
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>gb|AC083783.8| Homo sapiens chromosome 17, clone RP11-462C21, complete sequence
          Length = 143516

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      tgaattttctataaatgtga 27
              ||||||||||||||||||||
Sbjct: 121095 tgaattttctataaatgtga 121076
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>gb|AC092960.3| Homo sapiens 3 BAC RP11-393B14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172507

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      catttgaattttctataaat 23
              ||||||||||||||||||||
Sbjct: 161099 catttgaattttctataaat 161080
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>gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, complete sequence
          Length = 155354

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    attttctataaatgtgacat 30
             ||||||||||||||||||||
Sbjct: 23774 attttctataaatgtgacat 23793
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>gb|AY069477.1| Drosophila melanogaster LD21601 full insert cDNA
          Length = 2054

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 9    gaattttctataaatgtgac 28
            ||||||||||||||||||||
Sbjct: 1730 gaattttctataaatgtgac 1711
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>emb|AL583742.2|CNS07EFV Human chromosome 14 DNA sequence BAC R-318A9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 175584

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    atgtgacatcaccaccatcc 41
             ||||||||||||||||||||
Sbjct: 71007 atgtgacatcaccaccatcc 71026
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>gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71 of 83 of the complete
              sequence
          Length = 299903

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      gaattttctataaatgtgac 28
              ||||||||||||||||||||
Sbjct: 288396 gaattttctataaatgtgac 288377
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>gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.401_O_9, complete sequence
          Length = 198582

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     tgaattttctataaatgtga 27
             ||||||||||||||||||||
Sbjct: 63377 tgaattttctataaatgtga 63358
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>gb|U09374.1|DMU09374 Drosophila melanogaster soluble NSF attachment protein mRNA, complete
            cds
          Length = 2038

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 9    gaattttctataaatgtgac 28
            ||||||||||||||||||||
Sbjct: 1718 gaattttctataaatgtgac 1699
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>emb|AL691423.14| Mouse DNA sequence from clone RP23-21D3 on chromosome 2, complete
              sequence
          Length = 216415

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      tttgaattttctataaatgt 25
              ||||||||||||||||||||
Sbjct: 104442 tttgaattttctataaatgt 104461
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>ref|NM_121173.2| Arabidopsis thaliana catalytic AT5G11350 mRNA, complete cds
          Length = 2512

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 135  catctagtttcttttcagccaca 157
            ||||||||||| |||||||||||
Sbjct: 1743 catctagtttcatttcagccaca 1721
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>gb|AC165258.2| Mus musculus BAC clone RP23-127F20 from chromosome 17, complete
             sequence
          Length = 203927

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 6     tttgaattttctataaatg 24
             |||||||||||||||||||
Sbjct: 95019 tttgaattttctataaatg 95037
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>ref|NM_191752.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2721

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 11   attttctataaatgtgaca 29
            |||||||||||||||||||
Sbjct: 2373 attttctataaatgtgaca 2355
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>gb|AC139934.9| Mus musculus chromosome 12, clone RP23-39G14, complete sequence
          Length = 312488

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 8      tgaattttctataaatgtg 26
              |||||||||||||||||||
Sbjct: 281166 tgaattttctataaatgtg 281184
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>gb|AC024168.5| Homo sapiens chromosome 3 clone RP11-622P3 map 3p, complete sequence
          Length = 186276

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 23     tgtgacatcaccaccatcc 41
              |||||||||||||||||||
Sbjct: 138194 tgtgacatcaccaccatcc 138176
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>gb|AC115785.9| Mus musculus chromosome 12, clone RP23-170K17, complete sequence
          Length = 261721

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 8     tgaattttctataaatgtg 26
             |||||||||||||||||||
Sbjct: 87372 tgaattttctataaatgtg 87390
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>gb|AC006151.4| Homo sapiens BAC clone GS1-286B23 from 7, complete sequence
          Length = 136006

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 8     tgaattttctataaatgtg 26
             |||||||||||||||||||
Sbjct: 12048 tgaattttctataaatgtg 12030
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>emb|AL627143.13| Human DNA sequence from clone RP11-14O9 on chromosome X Contains the
            3' end of the RP2 gene for retinitis pigmentosa 2
            (X-linked recessive), a novel gene, the 5' end of a novel
            gene (KIAA0215) and a CpG island, complete sequence
          Length = 81195

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 7    ttgaattttctataaatgt 25
            |||||||||||||||||||
Sbjct: 1837 ttgaattttctataaatgt 1855
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>emb|AL606843.16| Human DNA sequence from clone RP11-94F13 on chromosome 1 Contains a
             proteasome (prosome, macropain) 26S subunit ATPase 1
             (PSMC10 pseudogene, complete sequence
          Length = 96028

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 5     atttgaattttctataaat 23
             |||||||||||||||||||
Sbjct: 29976 atttgaattttctataaat 29994
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>emb|AL590115.7| Human DNA sequence from clone RP11-255O17 on chromosome 1 Contains a
              novel gene, the LHX9 gene for LIM homeobox 9 and a CpG
              island, complete sequence
          Length = 182527

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 7      ttgaattttctataaatgt 25
              |||||||||||||||||||
Sbjct: 158626 ttgaattttctataaatgt 158644
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>gb|AY143977.1| Arabidopsis thaliana At5g11350/F2I11_240 mRNA, complete cds
          Length = 2265

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 135  catctagtttcttttcagccaca 157
            ||||||||||| |||||||||||
Sbjct: 1729 catctagtttcatttcagccaca 1707
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>emb|AL050307.13|HSDJ689N3 Human DNA sequence from clone RP4-689N3 on chromosome Xp11.1-11.4
           Contains the 5' end of the RP2 gene for retinitis
           pigmentosa 2 (X-linked recessive), the 5' end of the
           SLC9A7 gene for solute carrier family 9 (sodium/hydrogen
           exchanger), isoform 7 (NHE7), and two CpG Islands,
           complete sequence
          Length = 121502

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 7   ttgaattttctataaatgt 25
           |||||||||||||||||||
Sbjct: 164 ttgaattttctataaatgt 146
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>emb|AL360314.1|ATF2I11 Arabidopsis thaliana DNA chromosome 5, BAC clone F2I11 (ESSA project)
          Length = 110992

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 135   catctagtttcttttcagccaca 157
             ||||||||||| |||||||||||
Sbjct: 87339 catctagtttcatttcagccaca 87317
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>emb|CR352217.9| Zebrafish DNA sequence from clone CH211-129P13 in linkage group 15,
              complete sequence
          Length = 162948

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 11     attttctataaatgtgaca 29
              |||||||||||||||||||
Sbjct: 151722 attttctataaatgtgaca 151704
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>gb|AC116991.2| Homo sapiens chromosome 3 clone RP11-264M9, complete sequence
          Length = 152794

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 86    aggtcccaatagaaacaga 104
             |||||||||||||||||||
Sbjct: 77239 aggtcccaatagaaacaga 77221
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>gb|AC024474.8| Homo sapiens chromosome 15, clone RP11-686I6, complete sequence
          Length = 194973

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 7      ttgaattttctataaatgt 25
              |||||||||||||||||||
Sbjct: 167857 ttgaattttctataaatgt 167839
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>gb|AC096642.2| Homo sapiens chromosome 1 clone RP11-392O17, complete sequence
          Length = 179048

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 134   gcatctagtttcttttcag 152
             |||||||||||||||||||
Sbjct: 93747 gcatctagtttcttttcag 93765
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>gb|AY069916.1| Arabidopsis thaliana At5g11350/F2I11_240 mRNA, complete cds
          Length = 2512

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 135  catctagtttcttttcagccaca 157
            ||||||||||| |||||||||||
Sbjct: 1743 catctagtttcatttcagccaca 1721
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 11       attttctataaatgtgaca 29
                |||||||||||||||||||
Sbjct: 29762090 attttctataaatgtgaca 29762072
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>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0683B11
          Length = 155955

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 11   attttctataaatgtgaca 29
            |||||||||||||||||||
Sbjct: 6185 attttctataaatgtgaca 6167
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>dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1131B07
          Length = 109135

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 11    attttctataaatgtgaca 29
             |||||||||||||||||||
Sbjct: 91821 attttctataaatgtgaca 91803
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>gb|AC073902.3| Homo sapiens BAC clone RP11-228F17 from 2, complete sequence
          Length = 60232

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 20    aaatgtgacatcaccacca 38
             |||||||||||||||||||
Sbjct: 37710 aaatgtgacatcaccacca 37692
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>gb|AC129947.4| Branchiostoma floridae, clone -36D2, complete sequence
          Length = 67258

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 142  tttcttttcagccacaccgatga 164
            |||||||||||||||||| ||||
Sbjct: 3462 tttcttttcagccacaccaatga 3484
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>dbj|AK065152.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B10, full
            insert sequence
          Length = 4179

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 11   attttctataaatgtgaca 29
            |||||||||||||||||||
Sbjct: 3452 attttctataaatgtgaca 3434
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>emb|BX914195.11| Zebrafish DNA sequence from clone CH211-170L6 in linkage group 18,
              complete sequence
          Length = 156691

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 11     attttctataaatgtgaca 29
              |||||||||||||||||||
Sbjct: 113724 attttctataaatgtgaca 113706
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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 24     gtgacatcaccaccatccg 42
              |||||||||||||||||||
Sbjct: 659068 gtgacatcaccaccatccg 659086
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>dbj|AP006296.1| Homo sapiens genomic DNA, chromosome 11 clone:RP11-137N23, complete
             sequence
          Length = 57462

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 6     tttgaattttctataaatg 24
             |||||||||||||||||||
Sbjct: 16301 tttgaattttctataaatg 16319
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>gb|AC090944.2| Homo sapiens chromosome 3 clone RP11-238A9 map 3p, complete sequence
          Length = 162513

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 23     tgtgacatcaccaccatcc 41
              |||||||||||||||||||
Sbjct: 138149 tgtgacatcaccaccatcc 138167
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>emb|AL845166.8| Mouse DNA sequence from clone RP23-236H15 on chromosome 2, complete
             sequence
          Length = 104990

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 110   gactcaaaagctctgcctg 128
             |||||||||||||||||||
Sbjct: 62004 gactcaaaagctctgcctg 61986
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>gb|AC171730.1| Lycopersicon esculentum chromosome 01 clone C01HBa0256E08, complete
             sequence
          Length = 147630

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     ccatttgaattttctataa 21
             |||||||||||||||||||
Sbjct: 53107 ccatttgaattttctataa 53125
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>gb|AC127522.7| Homo sapiens chromosome 15, clone RP13-126C7, complete sequence
          Length = 166914

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 7      ttgaattttctataaatgt 25
              |||||||||||||||||||
Sbjct: 117972 ttgaattttctataaatgt 117954


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,015,115
Number of Sequences: 3902068
Number of extensions: 2015115
Number of successful extensions: 151377
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 151163
Number of HSP's gapped (non-prelim): 214
length of query: 165
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 143
effective length of database: 17,147,199,772
effective search space: 2452049567396
effective search space used: 2452049567396
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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