>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2|
          Length = 1051

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 27/41 (65%), Positives = 27/41 (65%)
 Frame = -3

Query: 366  VAREVAKMEVPSYRRHLXXXXXXXXXXXXXXDIPLVSVYFR 244
            VAREVAKMEVPSYRRHL              DIPLVSVYFR
Sbjct: 1011 VAREVAKMEVPSYRRHLDVVVACEDDDDNDVDIPLVSVYFR 1051

>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1|
          Length = 1051

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 27/41 (65%), Positives = 27/41 (65%)
 Frame = -3

Query: 366  VAREVAKMEVPSYRRHLXXXXXXXXXXXXXXDIPLVSVYFR 244
            VAREVAKMEVPSYRRHL              DIPLVSVYFR
Sbjct: 1011 VAREVAKMEVPSYRRHLDVVVACEDDDDNDVDIPLVSVYFR 1051

>UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3|
          Length = 1053

 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 23/41 (56%), Positives = 26/41 (63%)
 Frame = -3

Query: 366  VAREVAKMEVPSYRRHLXXXXXXXXXXXXXXDIPLVSVYFR 244
            +AREVAK++VP YRRHL              DIPLVSVYFR
Sbjct: 1013 IAREVAKVDVPEYRRHLDIGVACEDEDENDVDIPLVSVYFR 1053

>UVRC_RALSO (Q8Y0H3) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 654

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 268 DVDIVVIVILTGHHDVEMTPVRGHLHLG 351
           D+DI+ + I  GH  V +  VRG  HLG
Sbjct: 268 DIDILAVAIKGGHACVNLAMVRGGRHLG 295

>XERD_RICPR (Q9ZDG8) Tyrosine recombinase xerD|
          Length = 311

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 274 DIVVIVILTGHHDVEMTPVRGHLHLGHL 357
           D+ VI  L GH D+  T +  HLH  HL
Sbjct: 267 DLRVIQELLGHADISTTQIYTHLHTNHL 294

>UVRC_RALEJ (Q46Z26) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 663

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 265 RDVDIVVIVILTGHHDVEMTPVRGHLHLG 351
           RD+D++ + +  G   V +  VRG  HLG
Sbjct: 267 RDIDVLAVAVEGGRACVNLAMVRGGRHLG 295

>FUT4_PANTR (Q659K9) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) (Galactoside|
           3-L-fucosyltransferase) (Fucosyltransferase 4) (FUCT-IV)
           (Fuc-TIV)
          Length = 405

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 333 RAPPSWPPPW 362
           + PP WPPPW
Sbjct: 119 KGPPDWPPPW 128

>FUT4_HUMAN (P22083) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) (Galactoside|
           3-L-fucosyltransferase) (Fucosyltransferase 4) (FUCT-IV)
           (Fuc-TIV) (ELAM-1 ligand fucosyltransferase)
          Length = 405

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 333 RAPPSWPPPW 362
           + PP WPPPW
Sbjct: 119 KGPPDWPPPW 128

>FUT4_RAT (Q62994) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) (Galactoside|
           3-L-fucosyltransferase) (Fucosyltransferase 4) (FUCT-IV)
           (Fuc-TIV)
          Length = 433

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 333 RAPPSWPPPW 362
           + PP WPPPW
Sbjct: 145 KGPPDWPPPW 154

>FUT4_BOVIN (Q8HZR3) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) (Galactoside|
           3-L-fucosyltransferase) (Fucosyltransferase 4) (FUCT-IV)
           (Fuc-TIV)
          Length = 398

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 333 RAPPSWPPPW 362
           + PP WPPPW
Sbjct: 112 KGPPDWPPPW 121

>IF4E2_ARATH (O04663) Eukaryotic translation initiation factor 4E-2 (eIF4E-2)|
           (eIF-4E-2) (mRNA cap-binding protein) (eIF-(iso)4F 25
           kDa subunit) (eIF-(iso)4F p28 subunit) (eIF4Eiso
           protein) (eIF(iso)4E)
          Length = 198

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 90  DHWGLIWSCYQTSRFTRHAQHHL 22
           D WGL  + +QTS+ T +A+ HL
Sbjct: 61  DFWGLHETIFQTSKLTANAEIHL 83

>TX13B_HUMAN (Q9BXU2) Testis-expressed sequence 13B protein|
          Length = 312

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = +2

Query: 98  HRDGRKENQSVMWLKPPLSLQSLMQLMTCQSIRHDQPQDHVNTDEALLQ 244
           HR G+ +N+ V WL+    L     L+   ++   + Q  +  +EA  Q
Sbjct: 80  HRQGQLQNRRVQWLQGFAKLHRSAALVLASNLTELKEQQEMECNEATFQ 128


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,773,176
Number of Sequences: 219361
Number of extensions: 887806
Number of successful extensions: 2134
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2134
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)