>CRYD_VIBPA (Q87JP5) Cryptochrome DASH|
          Length = 445

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -3

Query: 254 YSFRFYHFIHINGLLLVGR*LYGAVLVCTYCRPSLT 147
           Y F F   +H N LL V    +   LVC YCRPS+T
Sbjct: 8   YWFTFDLRLHDNSLL-VDASSFLDELVCLYCRPSVT 42

>SSN2_YEAST (P38931) Suppressor of RNA polymerase B SSN2 (SCA1 protein)|
          Length = 1420

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +1

Query: 169 VHTRTAPYSHLPTSSNPLMWMKW*KRKLYAGCRMNSTNDALQTANCC 309
           + T TA YS      +  +++K  +RK+Y    + S N  +Q  N C
Sbjct: 90  IGTFTADYSKPNLPPHYALFLKALRRKIYINLALGSHNKLIQFGNAC 136

>COX1_LUMTE (Q34941) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide I)
          Length = 513

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 167 YCRPSLTAGFFSFFRCSGGNVAPLFMDDTSDLILYCVYYAAEHY 36
           Y  P L A  F F   +GG    +  + + D+IL+  YY   H+
Sbjct: 331 YETPVLWALGFIFLFTTGGLTGIILSNSSLDIILHDTYYVVAHF 374


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,877,537
Number of Sequences: 219361
Number of extensions: 774971
Number of successful extensions: 1378
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 80,573,946
effective HSP length: 78
effective length of database: 63,463,788
effective search space used: 1523130912
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)