ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl17e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC125643.3| Rattus norvegicus 4 BAC CH230-55N7 (Children's Ho... 44 0.11
2gb|AC099466.7| Rattus norvegicus 4 BAC CH230-63I9 (Children's Ho... 44 0.11
3gb|AC115835.6| Mus musculus chromosome 3, clone RP24-184C18, com... 44 0.11
4gb|AC132422.3| Mus musculus BAC clone RP23-302G15 from 12, compl... 44 0.11
5gb|AC148005.3| Mus musculus BAC clone RP23-295O6 from 12, comple... 44 0.11
6emb|AL354668.13| Human DNA sequence from clone RP11-506P24 on ch... 42 0.45
7emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, ... 42 0.45
8emb|AL022197.2|ATM7J2 Arabidopsis thaliana DNA chromosome 4, P1 ... 42 0.45
9gb|AC093913.2| Homo sapiens BAC clone RP11-768G3 from 4, complet... 42 0.45
10gb|AF178688.1|AF178688 Arabidopsis thaliana homeobox protein (FW... 42 0.45
11emb|BX470216.11| Mouse DNA sequence from clone RP23-390M8 on chr... 42 0.45
12gb|AC163281.3| Mus musculus BAC clone RP23-443B19 from chromosom... 40 1.8
13gb|AC134551.4| Mus musculus BAC clone RP24-274B10 from chromosom... 40 1.8
14gb|AC107638.17| Mus musculus, clone RP23-44D14, complete sequence 40 1.8
15emb|AL356278.8| Human DNA sequence from clone RP11-515J24 on chr... 40 1.8
16emb|AL117340.3|HSBA192P3 Human DNA sequence from clone RP11-192P... 40 1.8
17gb|AC154005.4| Mus musculus 6 BAC RP24-82B18 (Roswell Park Cance... 40 1.8
18emb|AL162507.1|ATT12C14 Arabidopsis thaliana DNA chromosome 3, B... 40 1.8
19emb|AJ327395.1|HSA327395 Homo sapiens genomic sequence surroundi... 40 1.8
20gb|AC154489.2| Mus musculus BAC clone RP23-205G15 from chromosom... 40 1.8
21gb|AC134838.4| Mus musculus BAC clone RP24-350C10 from 8, comple... 40 1.8
22gb|AC069509.16| Homo sapiens 3 BAC RP11-406M8 (Roswell Park Canc... 40 1.8
23gb|AC099645.11| Mus musculus chromosome 15, clone RP23-426G4, co... 38 7.0
24gb|AC103941.12| Mus musculus chromosome 9, clone RP23-430I4, com... 38 7.0
25gb|AC102075.7| Mus musculus chromosome 5, clone RP23-389F20, com... 38 7.0
26gb|U58730.1| Caenorhabditis elegans cosmid M02A10, complete sequ... 38 7.0
27gb|U58729.1| Caenorhabditis elegans cosmid F02G3, complete sequence 38 7.0
28gb|AC127171.54| Mus musculus strain C57BL/6J clone rp23-202i7 ma... 38 7.0
29ref|XM_460400.1| Debaryomyces hansenii CBS767 hypothetical prote... 38 7.0
30gb|AC132416.2| Mus musculus BAC clone RP23-251A5 from chromosome... 38 7.0
31gb|AC147678.5| Canis Familiaris, clone XX-25C7, complete sequence 38 7.0
32gb|AC119985.6| Mus musculus chromosome 5, clone RP24-502C10, com... 38 7.0
33gb|AC126408.6| Mus musculus chromosome 13, clone RP23-216P14, co... 38 7.0
34gb|AC108798.11| Mus musculus chromosome 5, clone RP23-419N6, com... 38 7.0
35emb|CT025685.5| Mouse DNA sequence from clone RP24-116B6 on chro... 38 7.0
36gb|AC074277.6| Homo sapiens 3 BAC RP11-82N13 (Roswell Park Cance... 38 7.0
37ref|XM_537535.2| PREDICTED: Canis familiaris similar to CG11638-... 38 7.0
38emb|CR956646.4| Pig DNA sequence from clone CH242-247L10 on chro... 38 7.0
39ref|XM_721462.1| Plasmodium yoelii yoelii str. 17XNL ATP-depende... 38 7.0
40gb|AC073968.8| Homo sapiens BAC clone RP11-111G20 from 7, comple... 38 7.0
41emb|AL844525.1| Human DNA sequence from clone RP11-158M19 on chr... 38 7.0
42gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 38 7.0
43emb|AL359438.19| Human DNA sequence from clone RP11-261A1 on chr... 38 7.0
44emb|CR354557.9| Zebrafish DNA sequence from clone DKEY-34I7 in l... 38 7.0
45gb|AC139100.3| Homo sapiens chromosome 18, clone, complete sequence 38 7.0
46emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS... 38 7.0
47emb|CR382399.1| Plasmodium falciparum chromosome 6, complete seq... 38 7.0
48emb|BX548161.12| Zebrafish DNA sequence from clone DKEY-248F6 in... 38 7.0
49gb|AC127503.3| Homo sapiens chromosome 18, clone RP11-245M2, com... 38 7.0
50gb|AC161059.4| Mus musculus BAC clone RP23-82L9 from chromosome ... 38 7.0
51gb|AC139345.8| Papio anubis clone rp41-256p17, complete sequence 38 7.0
52dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 38 7.0
53gb|AC095063.2| Homo sapiens BAC clone RP11-533K12 from 4, comple... 38 7.0
54gb|AC016304.8| Homo sapiens, clone RP11-25H11, complete sequence 38 7.0
55emb|BX548250.8| Zebrafish DNA sequence from clone DKEYP-104H9 in... 38 7.0
56gb|AC068875.5| Homo sapiens chromosome 15, clone RP11-720L8, com... 38 7.0
57emb|BX571777.4| Zebrafish DNA sequence from clone CH211-260F1 in... 38 7.0
58emb|BX248517.10| Zebrafish DNA sequence from clone DKEY-30O16 in... 38 7.0
59gb|AC160137.2| Mus musculus BAC clone RP23-136A1 from chromosome... 38 7.0
60gb|AF218051.1|AF218051 Salmonella enteritidis low molecular weig... 38 7.0
61emb|BX784031.5| Zebrafish DNA sequence from clone DKEY-174E15 in... 38 7.0
62dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.0
63gb|AC097484.3| Homo sapiens BAC clone RP11-147K6 from 4, complet... 38 7.0
64gb|AC011247.10| Homo sapiens BAC clone RP11-541E12 from 2, compl... 38 7.0
65gb|AC104794.4| Homo sapiens BAC clone RP11-254F7 from 2, complet... 38 7.0
66dbj|AP004754.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.0
67emb|AL954306.10| Zebrafish DNA sequence from clone CH211-113G11 ... 38 7.0
68emb|AL954129.11| Zebrafish DNA sequence from clone CH211-200P22 ... 38 7.0
69emb|BX323079.7| Zebrafish DNA sequence from clone DKEYP-113D7 in... 38 7.0
70emb|CT009762.8| Mouse DNA sequence from clone RP23-211O9 on chro... 38 7.0
71emb|CR847498.12| Zebrafish DNA sequence from clone DKEY-263P22 i... 38 7.0
72gb|AC087541.23| Mus musculus strain C57BL/6J chromosome 16 clone... 38 7.0
73emb|AL627257.9| Mouse DNA sequence from clone RP23-3L4 on chromo... 38 7.0
74emb|AL606909.12| Mouse DNA sequence from clone RP23-133N19 on ch... 38 7.0 
>gb|AC125643.3| Rattus norvegicus 4 BAC CH230-55N7 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 216677

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 47    agtgataaaacaaatgtatggt 68
             ||||||||||||||||||||||
Sbjct: 23376 agtgataaaacaaatgtatggt 23355
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>gb|AC099466.7| Rattus norvegicus 4 BAC CH230-63I9 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 227298

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 47     agtgataaaacaaatgtatggt 68
              ||||||||||||||||||||||
Sbjct: 120317 agtgataaaacaaatgtatggt 120296
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>gb|AC115835.6| Mus musculus chromosome 3, clone RP24-184C18, complete sequence
          Length = 172025

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 41    aacaaaagtgataaaacaaatg 62
             ||||||||||||||||||||||
Sbjct: 77500 aacaaaagtgataaaacaaatg 77479
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>gb|AC132422.3| Mus musculus BAC clone RP23-302G15 from 12, complete sequence
          Length = 151358

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 41    aacaaaagtgataaaacaaatg 62
             ||||||||||||||||||||||
Sbjct: 35558 aacaaaagtgataaaacaaatg 35579
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>gb|AC148005.3| Mus musculus BAC clone RP23-295O6 from 12, complete sequence
          Length = 151918

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 41    aacaaaagtgataaaacaaatg 62
             ||||||||||||||||||||||
Sbjct: 82773 aacaaaagtgataaaacaaatg 82752
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>emb|AL354668.13| Human DNA sequence from clone RP11-506P24 on chromosome 13 Contains the
              SPRY2 gene for sprouty homolog 2 (Drosophila) and a CpG
              island, complete sequence
          Length = 191652

 Score = 42.1 bits (21), Expect = 0.45
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 27     caaagattggaaaaaacaaaa 47
              |||||||||||||||||||||
Sbjct: 169061 caaagattggaaaaaacaaaa 169081
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>emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 63
          Length = 198777

 Score = 42.1 bits (21), Expect = 0.45
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 37     aaaaaacaaaagtgataaaacaaat 61
              ||||||| |||||||||||||||||
Sbjct: 120183 aaaaaactaaagtgataaaacaaat 120159
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>emb|AL022197.2|ATM7J2 Arabidopsis thaliana DNA chromosome 4, P1 clone M7J2 (ESSA project)
          Length = 80386

 Score = 42.1 bits (21), Expect = 0.45
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 37    aaaaaacaaaagtgataaaacaaat 61
             ||||||| |||||||||||||||||
Sbjct: 34635 aaaaaactaaagtgataaaacaaat 34659
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>gb|AC093913.2| Homo sapiens BAC clone RP11-768G3 from 4, complete sequence
          Length = 192059

 Score = 42.1 bits (21), Expect = 0.45
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 45     aaagtgataaaacaaatgtat 65
              |||||||||||||||||||||
Sbjct: 128916 aaagtgataaaacaaatgtat 128936
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>gb|AF178688.1|AF178688 Arabidopsis thaliana homeobox protein (FWA) gene, FWA-1 allele,
           complete cds
          Length = 5429

 Score = 42.1 bits (21), Expect = 0.45
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 37  aaaaaacaaaagtgataaaacaaat 61
           ||||||| |||||||||||||||||
Sbjct: 749 aaaaaactaaagtgataaaacaaat 725
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>emb|BX470216.11| Mouse DNA sequence from clone RP23-390M8 on chromosome 4, complete
            sequence
          Length = 162454

 Score = 42.1 bits (21), Expect = 0.45
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   acaaaagtgataaaacaaatg 62
            |||||||||||||||||||||
Sbjct: 3826 acaaaagtgataaaacaaatg 3846
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>gb|AC163281.3| Mus musculus BAC clone RP23-443B19 from chromosome 8, complete
            sequence
          Length = 197609

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 1    atctttcttttttcttacaaagct 24
            ||||||||||||||||| ||||||
Sbjct: 1818 atctttcttttttcttataaagct 1841
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>gb|AC134551.4| Mus musculus BAC clone RP24-274B10 from chromosome 5, complete sequence
          Length = 123372

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     ctttcttttttcttacaaag 22
             ||||||||||||||||||||
Sbjct: 87596 ctttcttttttcttacaaag 87577
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>gb|AC107638.17| Mus musculus, clone RP23-44D14, complete sequence
          Length = 231286

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 37     aaaaaacaaaagtgataaaacaaatgta 64
              ||||||||||||| |||||| |||||||
Sbjct: 108324 aaaaaacaaaagtaataaaaaaaatgta 108297
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>emb|AL356278.8| Human DNA sequence from clone RP11-515J24 on chromosome 6, complete
              sequence
          Length = 182510

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 36     gaaaaaacaaaagtgataaaacaa 59
              |||||||||||||| |||||||||
Sbjct: 170444 gaaaaaacaaaagttataaaacaa 170467
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>emb|AL117340.3|HSBA192P3 Human DNA sequence from clone RP11-192P3 on chromosome 10 Contains a
             novel gene, the 5' end of the TCF8 gene for transcription
             factor 8 (represses interleukin 2 expression)
             (BZP,ZEB,ZEB1,AREB6,ZFHEP,NIL-2A,ZFHX1A,NIL-2-A), a
             pseudogene similar to part of serine palmitoyltransferase,
             long chain base subunit 1 (SPTLC1) (HSAN, HSN1, LBC1,
             LCB1, SPT1, SPTI) and two CpG islands, complete sequence
          Length = 187517

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    gaaaaaacaaaagtgataaa 55
             ||||||||||||||||||||
Sbjct: 64652 gaaaaaacaaaagtgataaa 64671
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>gb|AC154005.4| Mus musculus 6 BAC RP24-82B18 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 181556

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      cttttttcttacaaagctgg 26
              ||||||||||||||||||||
Sbjct: 132166 cttttttcttacaaagctgg 132185
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>emb|AL162507.1|ATT12C14 Arabidopsis thaliana DNA chromosome 3, BAC clone T12C14
          Length = 77720

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     tctttcttttttcttacaaa 21
             ||||||||||||||||||||
Sbjct: 73098 tctttcttttttcttacaaa 73117
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>emb|AJ327395.1|HSA327395 Homo sapiens genomic sequence surrounding NotI site, clone NL6-AO3R
          Length = 756

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 4   tttcttttttcttacaaagc 23
           ||||||||||||||||||||
Sbjct: 728 tttcttttttcttacaaagc 709
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>gb|AC154489.2| Mus musculus BAC clone RP23-205G15 from chromosome 14, complete
             sequence
          Length = 210483

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    aaggatcatcttccaggcct 113
             ||||||||||||||||||||
Sbjct: 65950 aaggatcatcttccaggcct 65931
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>gb|AC134838.4| Mus musculus BAC clone RP24-350C10 from 8, complete sequence
          Length = 177716

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     atctttcttttttcttacaaagct 24
             ||||||||||||||||| ||||||
Sbjct: 96368 atctttcttttttcttataaagct 96345
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>gb|AC069509.16| Homo sapiens 3 BAC RP11-406M8 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 152832

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   attggaaaaaacaaaagtga 51
            ||||||||||||||||||||
Sbjct: 5226 attggaaaaaacaaaagtga 5207
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>gb|AC099645.11| Mus musculus chromosome 15, clone RP23-426G4, complete sequence
          Length = 208095

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 21    agctggcaaagattggaaa 39
             |||||||||||||||||||
Sbjct: 24796 agctggcaaagattggaaa 24814
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>gb|AC103941.12| Mus musculus chromosome 9, clone RP23-430I4, complete sequence
          Length = 172217

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                                 
Query: 28     aaagattggaaaaaacaaaagtgataaaacaaatg 62
              |||||||| ||| |||| |||| ||||||||||||
Sbjct: 169844 aaagattgaaaataacagaagttataaaacaaatg 169810
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>gb|AC102075.7| Mus musculus chromosome 5, clone RP23-389F20, complete sequence
          Length = 208311

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 42     acaaaagtgataaaacaaatgta 64
              ||||||||| |||||||||||||
Sbjct: 131232 acaaaagtgctaaaacaaatgta 131210
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>gb|U58730.1| Caenorhabditis elegans cosmid M02A10, complete sequence
          Length = 32559

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 43   caaaagtgataaaacaaatgtat 65
            |||||||| ||||||||||||||
Sbjct: 2145 caaaagtgttaaaacaaatgtat 2123
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>gb|U58729.1| Caenorhabditis elegans cosmid F02G3, complete sequence
          Length = 12693

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 43    caaaagtgataaaacaaatgtat 65
             |||||||| ||||||||||||||
Sbjct: 10838 caaaagtgttaaaacaaatgtat 10816
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>gb|AC127171.54| Mus musculus strain C57BL/6J clone rp23-202i7 map 10, complete sequence
          Length = 194193

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 104    ttccaggcctatacagaca 122
              |||||||||||||||||||
Sbjct: 166952 ttccaggcctatacagaca 166934
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>ref|XM_460400.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F01089g)
           partial mRNA
          Length = 1215

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 36  gaaaaaacaaaagtgataa 54
           |||||||||||||||||||
Sbjct: 445 gaaaaaacaaaagtgataa 463
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>gb|AC132416.2| Mus musculus BAC clone RP23-251A5 from chromosome 6, complete sequence
          Length = 157472

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     atctttcttttttcttaca 19
             |||||||||||||||||||
Sbjct: 46056 atctttcttttttcttaca 46074
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>gb|AC147678.5| Canis Familiaris, clone XX-25C7, complete sequence
          Length = 171041

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    aaaaaacaaaagtgataaa 55
             |||||||||||||||||||
Sbjct: 15106 aaaaaacaaaagtgataaa 15124
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>gb|AC119985.6| Mus musculus chromosome 5, clone RP24-502C10, complete sequence
          Length = 134739

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    aaaaaacaaaagtgataaa 55
             |||||||||||||||||||
Sbjct: 81123 aaaaaacaaaagtgataaa 81105
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>gb|AC126408.6| Mus musculus chromosome 13, clone RP23-216P14, complete sequence
          Length = 238967

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    aaaaaacaaaagtgataaa 55
             |||||||||||||||||||
Sbjct: 27989 aaaaaacaaaagtgataaa 28007
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>gb|AC108798.11| Mus musculus chromosome 5, clone RP23-419N6, complete sequence
          Length = 211603

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 42     acaaaagtgataaaacaaatgta 64
              ||||||||| |||||||||||||
Sbjct: 156141 acaaaagtgctaaaacaaatgta 156119
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>emb|CT025685.5| Mouse DNA sequence from clone RP24-116B6 on chromosome 9, complete
              sequence
          Length = 173933

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                                 
Query: 28     aaagattggaaaaaacaaaagtgataaaacaaatg 62
              |||||||| ||| |||| |||| ||||||||||||
Sbjct: 113189 aaagattgaaaataacagaagttataaaacaaatg 113223
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>gb|AC074277.6| Homo sapiens 3 BAC RP11-82N13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 175064

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 42    acaaaagtgataaaacaaa 60
             |||||||||||||||||||
Sbjct: 42232 acaaaagtgataaaacaaa 42250
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>ref|XM_537535.2| PREDICTED: Canis familiaris similar to CG11638-PA (LOC480414), mRNA
          Length = 705

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 2   tctttcttttttcttacaa 20
           |||||||||||||||||||
Sbjct: 330 tctttcttttttcttacaa 312
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>emb|CR956646.4| Pig DNA sequence from clone CH242-247L10 on chromosome 17, complete
             sequence
          Length = 171329

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 34    tggaaaaaacaaaagtgataaaa 56
             |||||||||||||||| ||||||
Sbjct: 90720 tggaaaaaacaaaagtcataaaa 90742
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>ref|XM_721462.1| Plasmodium yoelii yoelii str. 17XNL ATP-dependent RNA helicase Dhr1
           (PY00742) partial mRNA
          Length = 4548

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 37  aaaaaacaaaagtgataaaacaa 59
           ||||| |||||||||||||||||
Sbjct: 797 aaaaatcaaaagtgataaaacaa 819
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>gb|AC073968.8| Homo sapiens BAC clone RP11-111G20 from 7, complete sequence
          Length = 92245

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 29    aagattggaaaaaacaaaa 47
             |||||||||||||||||||
Sbjct: 37064 aagattggaaaaaacaaaa 37046
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>emb|AL844525.1| Human DNA sequence from clone RP11-158M19 on chromosome X, complete
             sequence
          Length = 114428

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 36    gaaaaaacaaaagtgataaaaca 58
             ||||||||||||| |||||||||
Sbjct: 33762 gaaaaaacaaaagagataaaaca 33784
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 22      gctggcaaagattggaaaa 40
               |||||||||||||||||||
Sbjct: 3940672 gctggcaaagattggaaaa 3940654
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>emb|AL359438.19| Human DNA sequence from clone RP11-261A1 on chromosome 13 Contains a
              legumain (LGMN) (PRSC1) pseudogene, complete sequence
          Length = 166490

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 38     aaaaacaaaagtgataaaacaaa 60
              |||||||||||||||| ||||||
Sbjct: 132283 aaaaacaaaagtgatacaacaaa 132261
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>emb|CR354557.9| Zebrafish DNA sequence from clone DKEY-34I7 in linkage group 23,
             complete sequence
          Length = 127420

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 40    aaacaaaagtgataaaacaaatg 62
             ||||||||||||||||| |||||
Sbjct: 51201 aaacaaaagtgataaaaaaaatg 51223
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>gb|AC139100.3| Homo sapiens chromosome 18, clone, complete sequence
          Length = 276546

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 30     agattggaaaaaacaaaag 48
              |||||||||||||||||||
Sbjct: 268512 agattggaaaaaacaaaag 268530
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>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces
             hansenii
          Length = 2336804

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 36    gaaaaaacaaaagtgataa 54
             |||||||||||||||||||
Sbjct: 82151 gaaaaaacaaaagtgataa 82169
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>emb|CR382399.1| Plasmodium falciparum chromosome 6, complete sequence; segment 2/5
          Length = 348174

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 2      tctttcttttttcttacaa 20
              |||||||||||||||||||
Sbjct: 215597 tctttcttttttcttacaa 215579
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>emb|BX548161.12| Zebrafish DNA sequence from clone DKEY-248F6 in linkage group 16,
              complete sequence
          Length = 188754

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      atctttcttttttcttaca 19
              |||||||||||||||||||
Sbjct: 159481 atctttcttttttcttaca 159463
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>gb|AC127503.3| Homo sapiens chromosome 18, clone RP11-245M2, complete sequence
          Length = 145418

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 30   agattggaaaaaacaaaag 48
            |||||||||||||||||||
Sbjct: 4974 agattggaaaaaacaaaag 4956
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>gb|AC161059.4| Mus musculus BAC clone RP23-82L9 from chromosome 6, complete sequence
          Length = 294389

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      atctttcttttttcttaca 19
              |||||||||||||||||||
Sbjct: 108150 atctttcttttttcttaca 108132
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>gb|AC139345.8| Papio anubis clone rp41-256p17, complete sequence
          Length = 179810

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 71    cattttatgcttgcatcaa 89
             |||||||||||||||||||
Sbjct: 22210 cattttatgcttgcatcaa 22192
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>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 95      aggatcatcttccaggcct 113
               |||||||||||||||||||
Sbjct: 2716711 aggatcatcttccaggcct 2716693
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>gb|AC095063.2| Homo sapiens BAC clone RP11-533K12 from 4, complete sequence
          Length = 153814

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 3      ctttcttttttcttacaaa 21
              |||||||||||||||||||
Sbjct: 144201 ctttcttttttcttacaaa 144219
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>gb|AC016304.8| Homo sapiens, clone RP11-25H11, complete sequence
          Length = 164336

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 4    tttcttttttcttacaaagctgg 26
            ||||||||||| |||||||||||
Sbjct: 1632 tttcttttttcctacaaagctgg 1654
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>emb|BX548250.8| Zebrafish DNA sequence from clone DKEYP-104H9 in linkage group 14,
              complete sequence
          Length = 165603

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 40     aaacaaaagtgataaaacaaatg 62
              ||||||||||||||||| |||||
Sbjct: 142816 aaacaaaagtgataaaaaaaatg 142838
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>gb|AC068875.5| Homo sapiens chromosome 15, clone RP11-720L8, complete sequence
          Length = 166706

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 4     tttcttttttcttacaaagctgg 26
             ||||||||||| |||||||||||
Sbjct: 95115 tttcttttttcctacaaagctgg 95137
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>emb|BX571777.4| Zebrafish DNA sequence from clone CH211-260F1 in linkage group 9,
             complete sequence
          Length = 155958

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 2     tctttcttttttcttacaa 20
             |||||||||||||||||||
Sbjct: 90709 tctttcttttttcttacaa 90727
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>emb|BX248517.10| Zebrafish DNA sequence from clone DKEY-30O16 in linkage group 16,
             complete sequence
          Length = 201353

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 41    aacaaaagtgataaaacaa 59
             |||||||||||||||||||
Sbjct: 30600 aacaaaagtgataaaacaa 30618
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>gb|AC160137.2| Mus musculus BAC clone RP23-136A1 from chromosome 9, complete sequence
          Length = 241917

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 31    gattggaaaaaacaaaagt 49
             |||||||||||||||||||
Sbjct: 75136 gattggaaaaaacaaaagt 75154
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>gb|AF218051.1|AF218051 Salmonella enteritidis low molecular weight plasmid I Mob (mobA),
            retron reverse transcriptase (rrt), and cold shock
            protein (csp) genes, complete cds; and unknown genes
          Length = 4053

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 35   ggaaaaaacaaaagtgataaaac 57
            ||||||||||||||| |||||||
Sbjct: 3199 ggaaaaaacaaaagtaataaaac 3221
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>emb|BX784031.5| Zebrafish DNA sequence from clone DKEY-174E15 in linkage group 21,
              complete sequence
          Length = 231014

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 40     aaacaaaagtgataaaaca 58
              |||||||||||||||||||
Sbjct: 226107 aaacaaaagtgataaaaca 226089
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 38      aaaaacaaaagtgataaaa 56
               |||||||||||||||||||
Sbjct: 5448455 aaaaacaaaagtgataaaa 5448473
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>gb|AC097484.3| Homo sapiens BAC clone RP11-147K6 from 4, complete sequence
          Length = 170217

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 29     aagattggaaaaaacaaaa 47
              |||||||||||||||||||
Sbjct: 138065 aagattggaaaaaacaaaa 138083
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>gb|AC011247.10| Homo sapiens BAC clone RP11-541E12 from 2, complete sequence
          Length = 208655

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 42     acaaaagtgataaaacaaa 60
              |||||||||||||||||||
Sbjct: 191974 acaaaagtgataaaacaaa 191956
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>gb|AC104794.4| Homo sapiens BAC clone RP11-254F7 from 2, complete sequence
          Length = 114324

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 37    aaaaaacaaaagtgataaaacaa 59
             |||||| ||||||||||||||||
Sbjct: 92468 aaaaaaaaaaagtgataaaacaa 92490
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>dbj|AP004754.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0529B09
          Length = 138188

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 38    aaaaacaaaagtgataaaa 56
             |||||||||||||||||||
Sbjct: 79389 aaaaacaaaagtgataaaa 79407
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>emb|AL954306.10| Zebrafish DNA sequence from clone CH211-113G11 in linkage group 16,
              complete sequence
          Length = 169830

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 41     aacaaaagtgataaaacaa 59
              |||||||||||||||||||
Sbjct: 100385 aacaaaagtgataaaacaa 100403
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>emb|AL954129.11| Zebrafish DNA sequence from clone CH211-200P22 in linkage group 24,
             complete sequence
          Length = 161275

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 38    aaaaacaaaagtgataaaa 56
             |||||||||||||||||||
Sbjct: 33343 aaaaacaaaagtgataaaa 33361
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>emb|BX323079.7| Zebrafish DNA sequence from clone DKEYP-113D7 in linkage group 19,
             complete sequence
          Length = 165200

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 104   ttccaggcctatacagaca 122
             |||||||||||||||||||
Sbjct: 80318 ttccaggcctatacagaca 80300
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>emb|CT009762.8| Mouse DNA sequence from clone RP23-211O9 on chromosome 13, complete
            sequence
          Length = 229171

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 37   aaaaaacaaaagtgataaa 55
            |||||||||||||||||||
Sbjct: 7344 aaaaaacaaaagtgataaa 7326
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>emb|CR847498.12| Zebrafish DNA sequence from clone DKEY-263P22 in linkage group 14,
              complete sequence
          Length = 168227

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 41     aacaaaagtgataaaacaaatgt 63
              |||||| ||||||||||||||||
Sbjct: 105121 aacaaatgtgataaaacaaatgt 105099
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>gb|AC087541.23| Mus musculus strain C57BL/6J chromosome 16 clone rp23-230d17, complete
              sequence
          Length = 204316

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 56     acaaatgtatggtcccattttat 78
              |||||||||||| ||||||||||
Sbjct: 149740 acaaatgtatggccccattttat 149718
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>emb|AL627257.9| Mouse DNA sequence from clone RP23-3L4 on chromosome 4, complete sequence
          Length = 241053

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 44     aaaagtgataaaacaaatg 62
              |||||||||||||||||||
Sbjct: 151738 aaaagtgataaaacaaatg 151756
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>emb|AL606909.12| Mouse DNA sequence from clone RP23-133N19 on chromosome 4, complete
             sequence
          Length = 105830

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 104   ttccaggcctatacagaca 122
             |||||||||||||||||||
Sbjct: 84089 ttccaggcctatacagaca 84071


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,283,028
Number of Sequences: 3902068
Number of extensions: 3283028
Number of successful extensions: 315866
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 315255
Number of HSP's gapped (non-prelim): 611
length of query: 146
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 125
effective length of database: 17,151,101,840
effective search space: 2143887730000
effective search space used: 2143887730000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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