>CBK1_YEAST (P53894) Serine/threonine-protein kinase CBK1 (EC 2.7.11.1) (Cell|
           wall biosynthesis kinase)
          Length = 756

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 8/91 (8%)
 Frame = +2

Query: 35  TAHAYPQHQQNNLLH-----LTPPYTPFQDQPRLPAGRFWTDSWGYRAEHQS*SEITMLE 199
           + H Y   QQ +  H           P+Q  PR PA  F ++    +  HQS  E    E
Sbjct: 15  SGHGYYMSQQQDQQHQQQQQYANEMNPYQQIPRPPAAGFSSNYMKEQGSHQSLQEHLQRE 74

Query: 200 MAN---GLLNPPATSTPTR*YFTVELSPPDH 283
             N   G  + PA + P         +PP H
Sbjct: 75  TGNLGSGFTDVPALNYPA--------TPPPH 97

>TMPS4_MOUSE (Q8VCA5) Transmembrane protease, serine 4 (EC 3.4.21.-)|
           (Channel-activating protease 2) (mCAP2)
          Length = 435

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 10/51 (19%)
 Frame = +2

Query: 47  YPQHQQNNLLHLTPPYT----------PFQDQPRLPAGRFWTDSWGYRAEH 169
           YP+ +   L+ L  P T          PF D+  +PA   W   WG+  E+
Sbjct: 283 YPKEKDIALVKLQMPLTFSGSVRPICLPFSDEVLVPATPVWVIGWGFTEEN 333

>P53_RABIT (Q95330) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 391

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 46  IPATPAK*SSAPYSPLHSIPGPASTTSWSL 135
           +PA PA  + AP +P  + P PA  TSW L
Sbjct: 63  VPAAPAPEAPAPAAPALAAPAPA--TSWPL 90

>NGF_RAT (P25427) Beta-nerve growth factor precursor (Beta-NGF)|
          Length = 241

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +3

Query: 63  KIIFCTLLPPTLHSRTSLDYQ---LVAFGQIHGDTEQSTNP 176
           +++F T  PPT      LD+Q    ++F + H     ST+P
Sbjct: 86  RVLFSTQPPPTSSDTLDLDFQAHGTISFNRTHRSKRSSTHP 126

>NGF_PRANA (P20675) Beta-nerve growth factor precursor (Beta-NGF)|
          Length = 241

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +3

Query: 63  KIIFCTLLPPTLHSRTSLDYQ---LVAFGQIHGDTEQSTNP 176
           +++F T  PPT      LD+Q    ++F + H     ST+P
Sbjct: 86  RVLFSTQPPPTSSDTLDLDFQAHGTISFNRTHRSKRSSTHP 126

>ATG2_PICPA (Q9HFR4) Autophagy-related protein 2 (Glucose-induced selective|
           autophagy protein 11) (Pexophagy zeocin-resistant mutant
           protein 7)
          Length = 1862

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +3

Query: 72  FCTLLPPTLHSRTSLDYQLVAFGQIHGDTEQSTN 173
           FC+ +P TLHS  S  YQ      +      S N
Sbjct: 520 FCSKIPSTLHSLQSYQYQKAKLASLSNPQSNSNN 553

>FOXE3_MOUSE (Q9QY14) Forkhead box protein E3|
          Length = 288

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
 Frame = +1

Query: 46  IPATPAK*SSAPYSPLHSIPGPASTTSWSL--LDRFMGIQSRAP 171
           +PA P      PY+P    P PAS     L  LD  +G+Q   P
Sbjct: 165 LPAPPPPPPPFPYAPFPPPPAPASAPPARLFRLDSLLGLQPEPP 208

>COX1_EMENI (P00402) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide I)
          Length = 567

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 18  LKKDDTQPMHTRNTSKIIFCTLLPPTLHSRTSLDYQ 125
           L  D  Q + TRN S + +C   PP  H+  SL  Q
Sbjct: 531 LFSDTFQVLFTRNNSSLEWCLTSPPKPHAFASLPLQ 566

>NGF_MOUSE (P01139) Beta-nerve growth factor precursor (Beta-NGF)|
          Length = 241

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = +3

Query: 54  NTSKIIFCTLLPPTLHSRTSLDYQ---LVAFGQIHGDTEQSTNP 176
           ++ +++F T  PPT      LD+Q    + F + H     ST+P
Sbjct: 83  HSPRVLFSTQPPPTSSDTLDLDFQAHGTIPFNRTHRSKRSSTHP 126

>KNRL_DROME (P13054) Knirps-related protein|
          Length = 647

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +2

Query: 47  YPQHQQNNLLHLTPPYTPFQDQPRLPAG 130
           +   +++ ++ +TPP++P Q + R PAG
Sbjct: 460 HDDEEEDLVVSMTPPHSPAQQEERTPAG 487


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,288,228
Number of Sequences: 219361
Number of extensions: 950635
Number of successful extensions: 2297
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2297
length of database: 80,573,946
effective HSP length: 71
effective length of database: 64,999,315
effective search space used: 1559983560
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)