>AMPN_CAUCR (P37893) Aminopeptidase N (EC 3.4.11.2) (Alpha-aminoacylpeptide|
           hydrolase)
          Length = 863

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 25/57 (43%), Positives = 35/57 (61%)
 Frame = -1

Query: 333 LQLDKINPQVASRMVSAFSRWRRYDETRQALAKAQSEMIISANGLSENVYEIASKSL 163
           L++D  NP  A+R+V     WRRY      L +AQ E I++   LS+NV E+ASK+L
Sbjct: 806 LKVDAFNPMTAARLVEPLGGWRRYKPELGDLMRAQLERIVAHPNLSKNVLELASKAL 862

>AMPN_ECOLI (P04825) Aminopeptidase N (EC 3.4.11.2) (Alpha-aminoacylpeptide|
           hydrolase)
          Length = 869

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 23/56 (41%), Positives = 33/56 (58%)
 Frame = -1

Query: 327 LDKINPQVASRMVSAFSRWRRYDETRQALAKAQSEMIISANGLSENVYEIASKSLA 160
           L+  NPQVASR++    R +RYD  RQ   +A  E +     LS ++YE  +K+LA
Sbjct: 814 LNSRNPQVASRLIEPLIRLKRYDAKRQEKMRAALEQLKGLENLSGDLYEKITKALA 869

>AMPN_HAEIN (P45274) Aminopeptidase N (EC 3.4.11.2) (Alpha-aminoacylpeptide|
           hydrolase)
          Length = 869

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 20/57 (35%), Positives = 35/57 (61%)
 Frame = -1

Query: 333 LQLDKINPQVASRMVSAFSRWRRYDETRQALAKAQSEMIISANGLSENVYEIASKSL 163
           ++L++ NPQVA+R++    R+ R+D  RQ L K   E +     LS++++E   K+L
Sbjct: 812 IRLNESNPQVAARLIEPLIRFSRFDAQRQTLMKRALERLSVVENLSKDLFEKIEKAL 868

>AMP1_PLAFQ (O96935) M1-family aminopeptidase (EC 3.4.11.-) (Pfa-M1)|
          Length = 1085

 Score = 34.7 bits (78), Expect = 0.061
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -1

Query: 324  DKINPQVASRMVSAFSRWRRYDETRQALAKAQSEMIISANGLSENVYE 181
            DK NP VA+++   F  W + D  RQ L   +   ++    +S N+ E
Sbjct: 1029 DKFNPMVATQLCEPFKLWNKLDTKRQELMLNEMNTMLQEPNISNNLKE 1076

>RPOM_HUMAN (O00411) DNA-directed RNA polymerase, mitochondrial precursor (EC|
            2.7.7.6) (MtRPOL)
          Length = 1230

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +3

Query: 24   TIVACYFTHAKYSRIYSVKYTFRALVMVKGSTGRIKFVSLHQETKLPDFSRLSHRHF 194
            T + CY     +  ++   +T  A V V     R +FV LH E  L D SR   + F
Sbjct: 1135 TALHCYRKGLTFVSVHDCYWTHAADVSVMNQVCREQFVRLHSEPILQDLSRFLVKRF 1191

>SF3B5_DROME (Q9VHI4) Probable splicing factor 3B subunit 5 (SF3b5)|
           (Pre-mRNA-splicing factor SF3b 10 kDa subunit)
          Length = 85

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +3

Query: 273 IERMLTPCGMPPEDL 317
           +ERML PCG PPE L
Sbjct: 69  MERMLQPCGPPPEKL 83

>SF3BB_ARATH (P58728) Protein At4g14342|
          Length = 87

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 243 ELVSSRHISSIERMLTPCGMPPE 311
           E +     + +++ML PCG+PPE
Sbjct: 61  ESIGRERYNFMQKMLLPCGLPPE 83

>SF3BA_ARATH (Q9LW64) Protein At3g23325|
          Length = 87

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 243 ELVSSRHISSIERMLTPCGMPPE 311
           E +     + +++ML PCG+PPE
Sbjct: 61  ESIGRERYNFMQKMLLPCGLPPE 83


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,052,005
Number of Sequences: 219361
Number of extensions: 731726
Number of successful extensions: 1635
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1635
length of database: 80,573,946
effective HSP length: 86
effective length of database: 61,708,900
effective search space used: 1481013600
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)