ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl17d04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PNO_EUGGR (Q94IN5) Pyruvate dehydrogenase [NADP+], mitochondrial... 28 6.0

>PNO_EUGGR (Q94IN5) Pyruvate dehydrogenase [NADP+], mitochondrial precursor (EC|
            1.2.1.51) (EC 1.16.1.5) (Pyruvate:NADP+ oxidoreductase)
            (EgPNOmt) (Aquacobalamin reductase [NADPH])
          Length = 1803

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -3

Query: 240  PVLTSSYVSD-VHMYKFRLKNIFILRDGGSTFLPYCMCDGTSKLVVKIILVHSEQFFFQL 64
            P  T S V + +  Y    K++  + + GS  LP+CM  G     V  IL      F++ 
Sbjct: 1468 PENTRSVVEEFLQYYGLNPKDVITIENKGSRELPHCMAVGDLFTKVLDILGKPNNRFYKT 1527

Query: 63   VSY 55
            +SY
Sbjct: 1528 LSY 1530


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,090,535
Number of Sequences: 219361
Number of extensions: 817835
Number of successful extensions: 1327
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1327
length of database: 80,573,946
effective HSP length: 70
effective length of database: 65,218,676
effective search space used: 1565248224
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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