>PSTA_DICDI (P11976) Prestalk protein precursor|
          Length = 1046

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 91  NSCSSCSKPIPCDGSNAC 38
           NS  SC  PI CD +NAC
Sbjct: 255 NSTGSCHTPITCDDNNAC 272

>UVRC_LACLA (Q9CH98) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 668

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
 Frame = -2

Query: 353 GYASQIAVFRRMATDQGGSSPI----ENDSHQPYEVLWEWPNASIPLTEFGRG*YYLT 192
           G A Q+ + +++  + G S P+    +ND HQ  E+L+  P   +PL+   +  + LT
Sbjct: 511 GGAGQVNITKQVLKELGLSIPVAGMQKNDKHQTSELLFGDPLDVVPLSRQSQEFFLLT 568

>HRH1_PONPY (Q9N2B0) Histamine H1 receptor|
          Length = 487

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -2

Query: 371 GSSDEPGYASQIAVFRRMATDQGGSSPIENDSHQPYEV 258
           G + +PG  S   V +R   D GG S +++ S  P E+
Sbjct: 246 GDAKKPGKESPWEVLKRKPKDAGGGSVLKSPSQTPKEM 283

>HRH1_HUMAN (P35367) Histamine H1 receptor|
          Length = 487

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -2

Query: 371 GSSDEPGYASQIAVFRRMATDQGGSSPIENDSHQPYEV 258
           G + +PG  S   V +R   D GG S +++ S  P E+
Sbjct: 246 GDAKKPGKESPWEVLKRKPKDAGGGSVLKSPSQTPKEM 283

>HRH1_GORGO (Q9N2B1) Histamine H1 receptor|
          Length = 487

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -2

Query: 371 GSSDEPGYASQIAVFRRMATDQGGSSPIENDSHQPYEV 258
           G + +PG  S   V +R   D GG S +++ S  P E+
Sbjct: 246 GDAKKPGKESPWEVLKRKPKDAGGGSVLKSPSQTPKEM 283

>VE2_HPV33 (P06423) Regulatory protein E2|
          Length = 353

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 3/24 (12%)
 Frame = -1

Query: 375 WRLERRT---WLCFPDSCFQKNGD 313
           W L++ +   WLC P  CF+K G+
Sbjct: 92  WTLQQTSLEVWLCEPPKCFKKQGE 115

>ISPG_NEIMB (Q9JZ40) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC|
           1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl
           4-diphosphate synthase)
          Length = 421

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 362 DEPGYASQIAVFRRMATDQGGSSPIENDSHQPYE-VLWEWPNASIPLTEF 216
           + P  AS++A  RR   D G ++P+  D H   E +L E+P     L+++
Sbjct: 61  NSPEAASKVAEIRRRLDDMGYATPLIGDFHFNGERLLAEFPECGKALSKY 110

>ISPG_NEIMA (Q9JU34) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC|
           1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl
           4-diphosphate synthase)
          Length = 421

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 362 DEPGYASQIAVFRRMATDQGGSSPIENDSHQPYE-VLWEWPNASIPLTEF 216
           + P  AS++A  RR   D G ++P+  D H   E +L E+P     L+++
Sbjct: 61  NSPEAASKVAEIRRRLDDMGYATPLIGDFHFNGERLLAEFPECGKALSKY 110

>ISPG_NEIG1 (Q5F913) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC|
           1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl
           4-diphosphate synthase)
          Length = 421

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 362 DEPGYASQIAVFRRMATDQGGSSPIENDSHQPYE-VLWEWPNASIPLTEF 216
           + P  AS++A  RR   D G ++P+  D H   E +L E+P     L+++
Sbjct: 61  NSPEAASKVAEIRRRLDDMGYATPLIGDFHFNGERLLAEFPECGKALSKY 110

>POLG_MVEV5 (P05769) Genome polyprotein [Contains: Capsid protein C (Core|
            protein); Envelope protein M (Matrix protein); Major
            envelope protein E; Nonstructural protein 1 (NS1);
            Nonstructural protein 2A (NS2A); Flavivirin protease NS2B
            regulatory subunit;
          Length = 3434

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 110  IQQHTLGGLSN*QVSKNQSHHLGYEDGESGNITPA 214
            +Q+   GGL    +S+N +H + +  G SGNI  A
Sbjct: 2727 LQRRFGGGLVRVPLSRNSNHEMYWVSGASGNIVHA 2761


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,582,342
Number of Sequences: 219361
Number of extensions: 948818
Number of successful extensions: 2265
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2263
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)