>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                         
Query: 235     gatgcgttaggccattcccagagaacttcataaggttgatgc 276
               ||||| || ||||||||||||||||  |||||||||||||||
Sbjct: 3461843 gatgcatttggccattcccagagaagctcataaggttgatgc 3461884



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                
Query: 315     cgccattcttctgaaaacagctatctgggaagc 347
               ||||||||||||||| ||||| |||||||||||
Sbjct: 3461920 cgccattcttctgaagacagcgatctgggaagc 3461952

>dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0428D12
          Length = 141678

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                        
Query: 235    gatgcgttaggccattcccagagaacttcataaggttgatgc 276
              ||||| || ||||||||||||||||  |||||||||||||||
Sbjct: 101663 gatgcatttggccattcccagagaagctcataaggttgatgc 101704



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 315    cgccattcttctgaaaacagctatctgggaagc 347
              ||||||||||||||| ||||| |||||||||||
Sbjct: 101740 cgccattcttctgaagacagcgatctgggaagc 101772

>dbj|AK111609.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102N10, full
            insert sequence
          Length = 3167

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                      
Query: 235  gatgcgttaggccattcccagagaacttcataaggttgatgc 276
            ||||| || ||||||||||||||||  |||||||||||||||
Sbjct: 2958 gatgcatttggccattcccagagaagctcataaggttgatgc 2917



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 315  cgccattcttctgaaaacagctatctgggaagc 347
            ||||||||||||||| ||||| |||||||||||
Sbjct: 2881 cgccattcttctgaagacagcgatctgggaagc 2849

>gb|AY105677.1| Zea mays PCO139619 mRNA sequence
          Length = 545

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 321 tcttctgaaaacagctatctgggaagc 347
           ||||||||||||||| |||||||||||
Sbjct: 498 tcttctgaaaacagcgatctgggaagc 472

>emb|X14603.1|NCQA Neurospora crassa qa gene cluster
          Length = 18120

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 155  aagaaccagtctcatcatctc 175
            |||||||||||||||||||||
Sbjct: 5134 aagaaccagtctcatcatctc 5114

>gb|AC093637.5| Homo sapiens BAC clone RP11-239C17 from 4, complete sequence
          Length = 111211

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 314  tcgccattcttctgaaaacag 334
            |||||||||||||||||||||
Sbjct: 8528 tcgccattcttctgaaaacag 8508

>gb|M10139.1|NEUQA4 N.crassa qa-4 gene encoding 3-dehydroshikimate dehydratase, complete
            cds
          Length = 2596

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 155  aagaaccagtctcatcatctc 175
            |||||||||||||||||||||
Sbjct: 1035 aagaaccagtctcatcatctc 1055

>emb|AL357974.16| Human DNA sequence from clone RP11-398M15 on chromosome 1 Contains a
             novel gene, complete sequence
          Length = 93165

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   gatgcgttaggccattccca 254
             ||||||||||||||||||||
Sbjct: 58523 gatgcgttaggccattccca 58542

>emb|AL845255.2| Mouse DNA sequence from clone RP23-298K19 on chromosome 4 Contains a K+
              channel tetramerisation domain protein pseudogene and a
              novel gene, complete sequence
          Length = 199040

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 133    actatcaaactgacaagttagtaa 156
              ||||||| ||||||||||||||||
Sbjct: 178236 actatcatactgacaagttagtaa 178259

>gb|AC112915.5| Homo sapiens 12 BAC RP11-457A21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 27745

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   tctgaaaacagctatctggg 343
             ||||||||||||||||||||
Sbjct: 18859 tctgaaaacagctatctggg 18878

>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome
          Length = 1751377

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 252    ccagagaacttcataaggtt 271
              ||||||||||||||||||||
Sbjct: 413634 ccagagaacttcataaggtt 413615

>gb|AC119921.12| Mus musculus chromosome 12, clone RP24-252B23, complete sequence
          Length = 162290

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 320    ttcttctgaaaacagctatctggg 343
              ||||||||| ||||||||||||||
Sbjct: 127297 ttcttctgataacagctatctggg 127274


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,317,166
Number of Sequences: 3902068
Number of extensions: 2317166
Number of successful extensions: 39312
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39284
Number of HSP's gapped (non-prelim): 28
length of query: 375
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 353
effective length of database: 17,147,199,772
effective search space: 6052961519516
effective search space used: 6052961519516
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)