ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl17c10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483424.1| Oryza sativa (japonica cultivar-group), mRNA 96 1e-16
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
3dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
4dbj|AK069638.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
5dbj|AK058552.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
6gb|AY111604.1| Zea mays CL11280_1 mRNA sequence 54 3e-04
7gb|AY020903.1| Oryza sativa microsatellite MRG3228 containing (T... 42 1.3
8gb|AC150775.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
9ref|XM_323301.1| Neurospora crassa OR74A predicted protein (NCU0... 42 1.3
10ref|XM_951475.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.3
11gb|AC134582.5| Mus musculus BAC clone RP24-90M17 from chromosome... 42 1.3
12emb|BX119927.6| Human DNA sequence from clone RP11-85I13 on chro... 42 1.3
13emb|AL732371.4| Human DNA sequence from clone RP11-2K15 on chrom... 42 1.3
14emb|AL512590.2| Human DNA sequence from clone RP11-23J9 on chrom... 42 1.3
15gb|AC136970.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
16gb|AC099742.2| Papio anubis clone RP41-167P22, complete sequence 42 1.3
17gb|AC012322.8| Homo sapiens chromosome 16 clone RP11-562N11, com... 42 1.3
18gb|AC009109.9| Homo sapiens chromosome 16 clone RP11-467L24, com... 42 1.3
19dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
20dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
21gb|AY623664.1| Mycobacterium marinum mycobacterial enhanced infe... 42 1.3
22gb|AC121355.9| Mus musculus chromosome 15, clone RP24-434C10, co... 42 1.3
23gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
24gb|AC099637.7| Mus musculus chromosome 1, clone RP24-257C20, com... 40 5.2
25ref|NM_017192.1| Rattus norvegicus endothelial differentiation, ... 40 5.2
26gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.2
27gb|AC149230.2| Pan troglodytes BAC clone CH251-557H16 from 7, co... 40 5.2
28gb|DQ160197.1| Homo sapiens RAD51-like 1 (S. cerevisiae) (RAD51L... 40 5.2
29gb|AC004967.3| Homo sapiens PAC clone RP5-1111F22 from 7, comple... 40 5.2
30gb|AC142329.1| Pan troglodytes BAC clone RP43-25D8 from 11, comp... 40 5.2
31gb|AC119618.4| Homo sapiens X BAC RP11-430A19 (Roswell Park Canc... 40 5.2
32emb|AL732462.20| Mouse DNA sequence from clone RP23-132J5 on chr... 40 5.2
33gb|AC110774.3| Homo sapiens BAC clone RP11-254A24 from 4, comple... 40 5.2
34gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 255... 40 5.2
35dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
36dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
37gb|AC090111.1|AC090111 Homo sapiens chromosome 21 clone unknown,... 40 5.2
38gb|AC026776.4|AC026776 Homo sapiens chromosome 21 clone CTC-304G... 40 5.2
39dbj|AP000031.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 5.2
40dbj|BS000114.1| Pan troglodytes chromosome 22 clone:RP43-168A22,... 40 5.2
41dbj|BS000113.1| Pan troglodytes chromosome 22 clone:RP43-098E13,... 40 5.2
42dbj|AB102768.1| Oryzias latipes plscr1, zic4, zic1 genes for pho... 40 5.2
43dbj|BS000058.1| Pan troglodytes chromosome 22 clone:CH251-361G18... 40 5.2
44emb|AL121595.5|CNS01DRZ Human chromosome 14 DNA sequence BAC C-3... 40 5.2
45gb|AC154135.3| Tribolium castaneum BAC T.cast_C40D19 (Clemson U... 40 5.2
46dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 5.2
47dbj|AP001678.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 5.2
48gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.2
49emb|AL837527.2|CNS08CAQ Oryza sativa chromosome 12, . BAC OSJNBb... 40 5.2
50gb|AY210783.2| Nodularia spumigena strain NSOR10 putative heat t... 40 5.2
51gb|AC171737.2| Monodelphis domestica clone VMRC6-60O3 map human ... 40 5.2
52gb|U10699.1|RNU10699 Rattus norvegicus G-protein coupled recepto... 40 5.2
53dbj|AP000254.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 5.2
54dbj|AP000213.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 5.2
55dbj|AP001256.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 5.2 
>ref|XM_483424.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3428

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Minus

                                                                        
Query: 258  tcagttcatggagtggcagcaaataaacggcatccactgctgcttcttccctttcggcga 317
            |||| |||||||| |||||||||| || |||| |||||||||||||||||| || |||  
Sbjct: 3253 tcagctcatggaggggcagcaaatgaagggcacccactgctgcttcttccccttaggctt 3194

                                                        
Query: 318  cttctccaccggtaacctagcaggagaattccagtcttgctgct 361
            |||||||||||||||||| || ||||| ||||| || |||||||
Sbjct: 3193 cttctccaccggtaacctcgccggagagttccaatcctgctgct 3150
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Plus

                                                                            
Query: 258      tcagttcatggagtggcagcaaataaacggcatccactgctgcttcttccctttcggcga 317
                |||| |||||||| |||||||||| || |||| |||||||||||||||||| || |||  
Sbjct: 26136015 tcagctcatggaggggcagcaaatgaagggcacccactgctgcttcttccccttaggctt 26136074

                                                            
Query: 318      cttctccaccggtaacctagcaggagaattccagtcttgctgct 361
                |||||||||||||||||| || ||||| ||||| || |||||||
Sbjct: 26136075 cttctccaccggtaacctcgccggagagttccaatcctgctgct 26136118



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 134      aagtctgagacatcatcagtg 154
                |||||||||||||||||||||
Sbjct: 21087199 aagtctgagacatcatcagtg 21087179
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>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1191_A10
          Length = 140643

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Plus

                                                                         
Query: 258   tcagttcatggagtggcagcaaataaacggcatccactgctgcttcttccctttcggcga 317
             |||| |||||||| |||||||||| || |||| |||||||||||||||||| || |||  
Sbjct: 79946 tcagctcatggaggggcagcaaatgaagggcacccactgctgcttcttccccttaggctt 80005

                                                         
Query: 318   cttctccaccggtaacctagcaggagaattccagtcttgctgct 361
             |||||||||||||||||| || ||||| ||||| || |||||||
Sbjct: 80006 cttctccaccggtaacctcgccggagagttccaatcctgctgct 80049
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>dbj|AK069638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026J04, full
            insert sequence
          Length = 3431

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Minus

                                                                        
Query: 258  tcagttcatggagtggcagcaaataaacggcatccactgctgcttcttccctttcggcga 317
            |||| |||||||| |||||||||| || |||| |||||||||||||||||| || |||  
Sbjct: 3254 tcagctcatggaggggcagcaaatgaagggcacccactgctgcttcttccccttaggctt 3195

                                                        
Query: 318  cttctccaccggtaacctagcaggagaattccagtcttgctgct 361
            |||||||||||||||||| || ||||| ||||| || |||||||
Sbjct: 3194 cttctccaccggtaacctcgccggagagttccaatcctgctgct 3151
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>dbj|AK058552.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-C10, full
            insert sequence
          Length = 1195

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Minus

                                                                        
Query: 258  tcagttcatggagtggcagcaaataaacggcatccactgctgcttcttccctttcggcga 317
            |||| |||||||| |||||||||| || |||| |||||||||||||||||| || |||  
Sbjct: 1046 tcagctcatggaggggcagcaaatgaagggcacccactgctgcttcttccccttaggctt 987

                                                        
Query: 318  cttctccaccggtaacctagcaggagaattccagtcttgctgct 361
            |||||||||||||||||| || ||||| ||||| || |||||||
Sbjct: 986  cttctccaccggtaacctcgccggagagttccaatcctgctgct 943
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>gb|AY111604.1| Zea mays CL11280_1 mRNA sequence
          Length = 517

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 267 ggagtggcagcaaataaacggcatccactgctgcttctt 305
           |||||||||||| || |||||||||||| ||||||||||
Sbjct: 287 ggagtggcagcagatgaacggcatccacggctgcttctt 325
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>gb|AY020903.1| Oryza sativa microsatellite MRG3228 containing (TA)X15, closest
          to marker C104A, genomic sequence
          Length = 230

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 30 gcaagtataatttagtgttaa 50
          |||||||||||||||||||||
Sbjct: 45 gcaagtataatttagtgttaa 25
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>gb|AC150775.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNAa0048P17,complete sequence
          Length = 137127

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 30    gcaagtataatttagtgttaa 50
             |||||||||||||||||||||
Sbjct: 82609 gcaagtataatttagtgttaa 82629
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>ref|XM_323301.1| Neurospora crassa OR74A predicted protein (NCU03983.1) partial mRNA
          Length = 768

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 49  aagaagaagaaatcaacaaag 69
           |||||||||||||||||||||
Sbjct: 634 aagaagaagaaatcaacaaag 654
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>ref|XM_951475.1| Neurospora crassa OR74A hypothetical protein (NCU03983.1) partial
           mRNA
          Length = 768

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 49  aagaagaagaaatcaacaaag 69
           |||||||||||||||||||||
Sbjct: 634 aagaagaagaaatcaacaaag 654
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>gb|AC134582.5| Mus musculus BAC clone RP24-90M17 from chromosome 15, complete sequence
          Length = 175584

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 226    taatataaactccagaaagac 246
              |||||||||||||||||||||
Sbjct: 170843 taatataaactccagaaagac 170823
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>emb|BX119927.6| Human DNA sequence from clone RP11-85I13 on chromosome X, complete
             sequence
          Length = 37492

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 51    gaagaagaaatcaacaaagta 71
             |||||||||||||||||||||
Sbjct: 28447 gaagaagaaatcaacaaagta 28467
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>emb|AL732371.4| Human DNA sequence from clone RP11-2K15 on chromosome X Contains the 5'
              end of the REPS2 gene for RALBP1 associated Eps domain
              containing 2 and a chromobox homolog 5 (HP1 alpha homolog,
              Drosophila) (CBX5) pseudogene, complete sequence
          Length = 185152

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 123    gggacaaactgaagtctgaga 143
              |||||||||||||||||||||
Sbjct: 112547 gggacaaactgaagtctgaga 112567
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>emb|AL512590.2| Human DNA sequence from clone RP11-23J9 on chromosome 9 Contains the 3'
              end of the gene for KIAA1529 protein, the 5' end of a gene
              for tudor repeat associator with PCTAIRE 2 (PCTAIRE2BP), a
              pseudogene similar to part of ral guanine nucleotide
              dissociation stimulator (RALGDS) and two CpG islands,
              complete sequence
          Length = 165432

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 231    taaactccagaaagaccccca 251
              |||||||||||||||||||||
Sbjct: 126611 taaactccagaaagaccccca 126631
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>gb|AC136970.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBa0074L01, complete sequence
          Length = 115339

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 30   gcaagtataatttagtgttaa 50
            |||||||||||||||||||||
Sbjct: 5482 gcaagtataatttagtgttaa 5502
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>gb|AC099742.2| Papio anubis clone RP41-167P22, complete sequence
          Length = 171612

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     gtataatttagtgttaagaag 54
              |||||||||||||||||||||
Sbjct: 122794 gtataatttagtgttaagaag 122774
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>gb|AC012322.8| Homo sapiens chromosome 16 clone RP11-562N11, complete sequence
          Length = 186151

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 103    tccaaacaaaaagtgatgatg 123
              |||||||||||||||||||||
Sbjct: 150819 tccaaacaaaaagtgatgatg 150839
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>gb|AC009109.9| Homo sapiens chromosome 16 clone RP11-467L24, complete sequence
          Length = 150086

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 103   tccaaacaaaaagtgatgatg 123
             |||||||||||||||||||||
Sbjct: 70804 tccaaacaaaaagtgatgatg 70824
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 30      gcaagtataatttagtgttaa 50
               |||||||||||||||||||||
Sbjct: 1007200 gcaagtataatttagtgttaa 1007220
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>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0413H11
          Length = 147655

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 134   aagtctgagacatcatcagtg 154
             |||||||||||||||||||||
Sbjct: 58409 aagtctgagacatcatcagtg 58389
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>gb|AY623664.1| Mycobacterium marinum mycobacterial enhanced infection locus 2 (mel2)
            genomic sequence
          Length = 7931

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 355  tgctgctcggaacctggcttggcgg 379
            ||||| |||||||||||||||||||
Sbjct: 7746 tgctgatcggaacctggcttggcgg 7722
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>gb|AC121355.9| Mus musculus chromosome 15, clone RP24-434C10, complete sequence
          Length = 124054

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 226   taatataaactccagaaagac 246
             |||||||||||||||||||||
Sbjct: 73832 taatataaactccagaaagac 73852
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 30      gcaagtataatttagtgttaa 50
               |||||||||||||||||||||
Sbjct: 1004921 gcaagtataatttagtgttaa 1004941
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>gb|AC099637.7| Mus musculus chromosome 1, clone RP24-257C20, complete sequence
          Length = 169573

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    agaagaagaaatcaacaaag 69
             ||||||||||||||||||||
Sbjct: 79063 agaagaagaaatcaacaaag 79082
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>ref|NM_017192.1| Rattus norvegicus endothelial differentiation, sphingolipid
            G-protein-coupled receptor, 5 (Edg5), mRNA
          Length = 2754

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 293  actgctgcttcttccctttc 312
            ||||||||||||||||||||
Sbjct: 1764 actgctgcttcttccctttc 1783
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>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBb0004A05, complete sequence
          Length = 157913

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 268   gagtggcagcaaataaacggcatccactgctgcttc 303
             ||||| |||||||| |||||||||||  ||||||||
Sbjct: 63946 gagtgacagcaaatgaacggcatccatggctgcttc 63981
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>gb|AC149230.2| Pan troglodytes BAC clone CH251-557H16 from 7, complete sequence
          Length = 157879

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    tagtgttaagaagaagaaat 61
             ||||||||||||||||||||
Sbjct: 75102 tagtgttaagaagaagaaat 75121
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>gb|DQ160197.1| Homo sapiens RAD51-like 1 (S. cerevisiae) (RAD51L1) gene, complete cds
          Length = 660392

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   attccaaacaaaaagtgatg 120
             ||||||||||||||||||||
Sbjct: 12528 attccaaacaaaaagtgatg 12547
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>gb|AC004967.3| Homo sapiens PAC clone RP5-1111F22 from 7, complete sequence
          Length = 138107

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     tagtgttaagaagaagaaat 61
              ||||||||||||||||||||
Sbjct: 105259 tagtgttaagaagaagaaat 105278
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>gb|AC142329.1| Pan troglodytes BAC clone RP43-25D8 from 11, complete sequence
          Length = 188643

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   ctgagacatcatcagtgcgg 157
             ||||||||||||||||||||
Sbjct: 14505 ctgagacatcatcagtgcgg 14486
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>gb|AC119618.4| Homo sapiens X BAC RP11-430A19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 76836

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   atgatgggacaaactgaagt 137
             ||||||||||||||||||||
Sbjct: 74666 atgatgggacaaactgaagt 74685
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>emb|AL732462.20| Mouse DNA sequence from clone RP23-132J5 on chromosome 1, complete
             sequence
          Length = 91356

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    agaagaagaaatcaacaaag 69
             ||||||||||||||||||||
Sbjct: 45236 agaagaagaaatcaacaaag 45255
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>gb|AC110774.3| Homo sapiens BAC clone RP11-254A24 from 4, complete sequence
          Length = 121016

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   caaacaaaaagtgatgatgg 124
             ||||||||||||||||||||
Sbjct: 54378 caaacaaaaagtgatgatgg 54397
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>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome
          Length = 2174500

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     aagaagaagaaatcaacaaa 68
              ||||||||||||||||||||
Sbjct: 755585 aagaagaagaaatcaacaaa 755566
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 11       acacaacatttcatgatgag 30
                ||||||||||||||||||||
Sbjct: 19699362 acacaacatttcatgatgag 19699381
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 268      gagtggcagcaaataaacggcatccactgctgcttc 303
                ||||| |||||||| |||||||||||  ||||||||
Sbjct: 19132926 gagtgacagcaaatgaacggcatccatggctgcttc 19132961
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>gb|AC090111.1|AC090111 Homo sapiens chromosome 21 clone unknown, complete sequence
          Length = 136653

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    aatataaactccagaaagac 246
              ||||||||||||||||||||
Sbjct: 105863 aatataaactccagaaagac 105844
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>gb|AC026776.4|AC026776 Homo sapiens chromosome 21 clone CTC-304G18, complete sequence
          Length = 136653

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    aatataaactccagaaagac 246
              ||||||||||||||||||||
Sbjct: 105863 aatataaactccagaaagac 105844
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>dbj|AP000031.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 2/28, complete
             sequence
          Length = 149298

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   aatataaactccagaaagac 246
             ||||||||||||||||||||
Sbjct: 74847 aatataaactccagaaagac 74866
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>dbj|BS000114.1| Pan troglodytes chromosome 22 clone:RP43-168A22, map 22, complete
             sequences
          Length = 173403

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   aatataaactccagaaagac 246
             ||||||||||||||||||||
Sbjct: 21097 aatataaactccagaaagac 21116
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>dbj|BS000113.1| Pan troglodytes chromosome 22 clone:RP43-098E13, map 22, complete
              sequences
          Length = 172432

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 227    aatataaactccagaaagac 246
              ||||||||||||||||||||
Sbjct: 151237 aatataaactccagaaagac 151256
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>dbj|AB102768.1| Oryzias latipes plscr1, zic4, zic1 genes for phospholipid scramblase 1,
             zinc finger of the cerebellum 4, zinc finger of the
             cerebellum 1, partial and complete cds
          Length = 228508

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 278   aaataaacggcatccactgctgct 301
             |||||||| |||||||||||||||
Sbjct: 54947 aaataaactgcatccactgctgct 54970
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>dbj|BS000058.1| Pan troglodytes chromosome 22 clone:CH251-361G18, map 22, complete
             sequences
          Length = 23730

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    tagtgttaagaagaagaaat 61
             ||||||||||||||||||||
Sbjct: 15448 tagtgttaagaagaagaaat 15429
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>emb|AL121595.5|CNS01DRZ Human chromosome 14 DNA sequence BAC C-3225F7 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 171535

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    attccaaacaaaaagtgatg 120
              ||||||||||||||||||||
Sbjct: 146772 attccaaacaaaaagtgatg 146753
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>gb|AC154135.3| Tribolium castaneum  BAC T.cast_C40D19 (Clemson University Genomics
             Institute Tribolium castaneum BAC Library (Red Flour
             Beetle)) complete sequence
          Length = 130926

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    agcaattccaaacaaaaagt 116
             ||||||||||||||||||||
Sbjct: 37048 agcaattccaaacaaaaagt 37029
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>dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, section 55/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 227    aatataaactccagaaagac 246
              ||||||||||||||||||||
Sbjct: 321853 aatataaactccagaaagac 321872
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>dbj|AP001678.1| Homo sapiens genomic DNA, chromosome 21q, section 22/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    tagtgttaagaagaagaaat 61
             ||||||||||||||||||||
Sbjct: 52811 tagtgttaagaagaagaaat 52792
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 11       acacaacatttcatgatgag 30
                ||||||||||||||||||||
Sbjct: 19625576 acacaacatttcatgatgag 19625595
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>emb|AL837527.2|CNS08CAQ Oryza sativa chromosome 12, . BAC OSJNBb0078B20 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 133659

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    acacaacatttcatgatgag 30
             ||||||||||||||||||||
Sbjct: 27631 acacaacatttcatgatgag 27612
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>gb|AY210783.2| Nodularia spumigena strain NSOR10 putative heat transcriptional
             repressor protein, putative beta-carotene ketolase,
             putative high light inducible protein, putative
             transposase, NdaB (ndaB), NdaA (ndaA), NdaC (ndaC), NdaD
             (ndaD), O-methyltransferase NdaE (ndaE), NdaF (ndaF), NdaG
             (ndaG), NdaH (ndaH), ABC transporter NdaI (ndaI), and
             hypothetical proteins, complete cds
          Length = 54353

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 268   gagtggcagcaaataaacgg 287
             ||||||||||||||||||||
Sbjct: 14720 gagtggcagcaaataaacgg 14739
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>gb|AC171737.2| Monodelphis domestica clone VMRC6-60O3 map human ortholog 11q13.4,
             complete sequence
          Length = 131794

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   ccaaacaaaaagtgatgatg 123
             ||||||||||||||||||||
Sbjct: 43747 ccaaacaaaaagtgatgatg 43766
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>gb|U10699.1|RNU10699 Rattus norvegicus G-protein coupled receptor pH218 mRNA, complete cds
          Length = 2754

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 293  actgctgcttcttccctttc 312
            ||||||||||||||||||||
Sbjct: 1764 actgctgcttcttccctttc 1783
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>dbj|AP000254.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:S322, complete sequence
          Length = 25737

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   aatataaactccagaaagac 246
             ||||||||||||||||||||
Sbjct: 14731 aatataaactccagaaagac 14750
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>dbj|AP000213.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             f43D11-119B8, segment 11/12, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   aatataaactccagaaagac 246
             ||||||||||||||||||||
Sbjct: 34841 aatataaactccagaaagac 34860
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>dbj|AP001256.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B732H1,
              LL56-APP region, complete sequence
          Length = 204699

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     tagtgttaagaagaagaaat 61
              ||||||||||||||||||||
Sbjct: 136231 tagtgttaagaagaagaaat 136212


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,794,314
Number of Sequences: 3902068
Number of extensions: 4794314
Number of successful extensions: 73462
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73206
Number of HSP's gapped (non-prelim): 256
length of query: 388
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 366
effective length of database: 17,147,199,772
effective search space: 6275875116552
effective search space used: 6275875116552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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