ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl17c03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VIPR2_RAT (P35000) Vasoactive intestinal polypeptide receptor 2 ... 28 9.5
2VIPR2_MOUSE (P41588) Vasoactive intestinal polypeptide receptor ... 28 9.5

>VIPR2_RAT (P35000) Vasoactive intestinal polypeptide receptor 2 precursor|
           (VIP-R-2) (Pituitary adenylate cyclase-activating
           polypeptide type III receptor) (PACAP type III receptor)
           (PACAP-R-3)
          Length = 437

 Score = 27.7 bits (60), Expect = 9.5
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -3

Query: 80  CIGRFKGLVVAIPYGFL 30
           C+G F+GLVVA+ Y FL
Sbjct: 361 CVGSFQGLVVAVLYCFL 377



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>VIPR2_MOUSE (P41588) Vasoactive intestinal polypeptide receptor 2 precursor|
           (VIP-R-2) (Pituitary adenylate cyclase-activating
           polypeptide type III receptor) (PACAP type III receptor)
           (PACAP-R-3)
          Length = 437

 Score = 27.7 bits (60), Expect = 9.5
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -3

Query: 80  CIGRFKGLVVAIPYGFL 30
           C+G F+GLVVA+ Y FL
Sbjct: 361 CVGSFQGLVVAVLYCFL 377


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,682,835
Number of Sequences: 219361
Number of extensions: 172739
Number of successful extensions: 597
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 80,573,946
effective HSP length: 8
effective length of database: 78,819,058
effective search space used: 1891657392
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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