>RSE1_KLULA (Q6CXH8) Pre-mRNA-splicing factor RSE1|
          Length = 1269

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 142  SSGI*RCLYLLDVIIQCYMHLTPSFYELVNYV 47
            +S I  C Y L+ +   YM+ TP  +E+VN++
Sbjct: 1086 ASNIKACQYTLETLCHMYMNDTPMKFEIVNHM 1117

>VA47_VARV (P33856) Protein A47|
          Length = 244

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = -2

Query: 106 VIIQCYMHLTPSFYELVNYVFLLLGQSLLVGNKK 5
           +I++C  +LTP F +L+ Y  L +  ++L+ NKK
Sbjct: 192 LILRC-QYLTPIFSDLLKYAGLTIKSNILMWNKK 224

>RDRP_PVXHB (Q07630) RNA replication protein (165 kDa protein) (ORF 1 protein)|
           [Includes: RNA-directed RNA polymerase (EC 2.7.7.48);
           Helicase (EC 3.6.1.-)]
          Length = 1456

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 17/66 (25%), Positives = 27/66 (40%)
 Frame = +1

Query: 82  GAYNTEL*HQEGTNIFKCHWRHKGFK*QTVHQHQNSRKTDTSSHFANLHYKWTFLAGHLA 261
           GAY+ E  H +   + K  WR        +  H N       +H   +  + +F A HL 
Sbjct: 212 GAYHHEFSHLQSVKVGKIKWRDPK---DGLLGHLNYTHEQVDTHTVTVQLQESFAANHLY 268

Query: 262 LEQRGS 279
             +RG+
Sbjct: 269 CIRRGN 274

>VGLP_BEV (P23052) Peplomer glycoprotein precursor|
          Length = 1581

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -1

Query: 170 TVCYLKPLCLQWHLKMFVPS*CHNSVLYAPDAIF 69
           T+C+  P         FV   C+N+ LY PDA+F
Sbjct: 334 TLCFGSPF--------FVAQECYNNALYLPDAVF 359

>APU_THETY (P16950) Amylopullulanase precursor (Alpha-amylase/pullulanase)|
            [Includes: Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan
            glucanohydrolase); Pullulanase (EC 3.2.1.41)
            (1,4-alpha-D-glucan glucanohydrolase) (Alpha-dextrin
            endo-1,6-alpha-glucosida
          Length = 1475

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +2

Query: 101  YDIKKVQTSLNATGGTRVSNSKQYTNTRIPVKQTRAVILPTYT 229
            Y +  V TS N T     SN+ + T   IP+K T  V +P YT
Sbjct: 1234 YKVVAVDTSYNRTA----SNTVKATPDIIPIKVTFNVTIPDYT 1272


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,714,538
Number of Sequences: 219361
Number of extensions: 848383
Number of successful extensions: 1901
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1900
length of database: 80,573,946
effective HSP length: 87
effective length of database: 61,489,539
effective search space used: 1475748936
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)