ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl17b07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467437.1| Oryza sativa (japonica cultivar-group), mRNA 137 3e-29
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 137 3e-29
3dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic D... 137 3e-29
4dbj|AK065045.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 3e-29
5emb|AL355984.11| Human DNA sequence from clone RP11-501K3 on chr... 46 0.089
6emb|CR382398.1| Plasmodium falciparum chromosome 6, complete seq... 46 0.089
7gb|AC116798.11| Mus musculus chromosome 1, clone RP24-329K22, co... 42 1.4
8gb|AY318871.1| Canarypox virus strain ATCC VR-111, complete genome 42 1.4
9emb|CR847496.7| Zebrafish DNA sequence from clone CH211-203D1 in... 42 1.4
10gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, com... 42 1.4
11emb|AL713998.7| Human DNA sequence from clone RP11-301G19 on chr... 42 1.4
12gb|AC158753.8| Mus musculus chromosome 5, clone RP23-301E24, com... 42 1.4
13gb|AC023904.10| Homo sapiens chromosome 10 clone RP11-369L1, com... 42 1.4
14gb|AC131005.3| Homo sapiens 3 BAC RP11-88K11 (Roswell Park Cance... 42 1.4
15emb|AL954143.9| Zebrafish DNA sequence from clone CH211-206A7 in... 42 1.4
16emb|CR759813.6| Zebrafish DNA sequence from clone DKEY-150H10 in... 42 1.4
17gb|AC142502.3| Mus musculus BAC clone RP24-530L11 from 3, comple... 42 1.4
18gb|AC137127.11| Mus musculus chromosome 9, clone RP24-264F17, co... 40 5.5
19ref|NM_012674.1| Rattus norvegicus serine protease inhibitor, Ka... 40 5.5
20gb|AC150162.1| Solanum demissum chromosome 5 clone PGEC160O2 map... 40 5.5
21gb|AC009394.5| Drosophila melanogaster clone BACR03J17, complete... 40 5.5
22gb|AC009462.7| Drosophila melanogaster clone BACR27G04, complete... 40 5.5
23gb|AC138330.4| Mus musculus BAC clone RP23-19L20 from chromosome... 40 5.5
24gb|AC132270.3| Mus musculus BAC clone RP24-338C23 from chromosom... 40 5.5
25ref|XM_001003764.1| PREDICTED: Mus musculus gamma-aminobutyric a... 40 5.5
26ref|XM_917722.2| PREDICTED: Mus musculus gamma-aminobutyric acid... 40 5.5
27ref|XM_285181.6| PREDICTED: Mus musculus gamma-aminobutyric acid... 40 5.5
28gb|AC123840.4| Mus musculus BAC clone RP23-399K5 from chromosome... 40 5.5
29gb|AC122016.4| Mus musculus BAC clone RP24-359J23 from chromosom... 40 5.5
30gb|AC157800.9| Mus musculus chromosome 1, clone RP24-286C21, com... 40 5.5
31emb|AL513166.7| Human DNA sequence from clone RP11-261J10 on chr... 40 5.5
32gb|AC069504.7| Homo sapiens 3 BAC RP11-263A24 (Roswell Park Canc... 40 5.5
33gb|AC090671.5| Homo sapiens 12 BAC RP11-755O11 (Roswell Park Can... 40 5.5
34emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS... 40 5.5
35gb|AC091096.7| Homo sapiens chromosome 8, clone RP11-587H10, com... 40 5.5
36gb|AC090506.7| Homo sapiens chromosome 18, clone RP11-675P14, co... 40 5.5
37emb|AL805942.5| Mouse DNA sequence from clone RP24-71G5 on chrom... 40 5.5
38gb|AY040765.1| Mus musculus histidine triad protein 3 gene, comp... 40 5.5
39gb|AY998454.1| Solanum pectinatum voucher Peeke 8512 IND tRNA-Se... 40 5.5
40gb|AC009709.7|AC009709 Homo sapiens chromosome 18, clone RP11-31... 40 5.5
41gb|AC022193.5|AC022193 Homo sapiens, clone RP11-23B3, complete s... 40 5.5
42gb|AC154854.2| Mus musculus BAC clone RP23-23O4 from chromosome ... 40 5.5
43gb|AC018878.8| Homo sapiens BAC clone RP11-297N12 from 2, comple... 40 5.5
44gb|AC007274.3|AC007274 Homo sapiens BAC clone RP11-105L10 from Y... 40 5.5
45gb|AC006195.1|AC006195 Homo sapiens clone RP11-350H1 from 7p14-1... 40 5.5
46dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 5.5
47gb|AC007911.8|AC007911 Homo sapiens chromosome 18, clone RP11-52... 40 5.5
48gb|AE003721.3| Drosophila melanogaster chromosome 3R, section 59... 40 5.5
49emb|AL732626.8| Mouse DNA sequence from clone RP23-191F22 on chr... 40 5.5
50gb|M35299.1|RATPSTIAA Rat pancreatic secretory trypsin inhibitor... 40 5.5 
>ref|XM_467437.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3793

 Score =  137 bits (69), Expect = 3e-29
 Identities = 114/129 (88%)
 Strand = Plus / Minus

                                                                        
Query: 277  tgcaacgcttttattgttctcctcttccatgtgtcggtctccggttcaaaagtgagctcc 336
            ||||||||||||||| ||| |||||||||||||   ||||| ||||||||  ||||||||
Sbjct: 3468 tgcaacgcttttattattcccctcttccatgtggaagtctctggttcaaacctgagctcc 3409

                                                                        
Query: 337  caggtcggccaatagtgaaggtcctgtttcagagtgagcacccgtggtttcccgttcaaa 396
            ||||||||||| ||||||||||||||||||| ||| ||||| || ||||| || ||||||
Sbjct: 3408 caggtcggccagtagtgaaggtcctgtttcaaagtaagcacacgaggtttgccattcaaa 3349

                     
Query: 397  tggacggtc 405
            |||||||||
Sbjct: 3348 tggacggtc 3340



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   aattatccacaggcaatgaa 108
            ||||||||||||||||||||
Sbjct: 3709 aattatccacaggcaatgaa 3690
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  137 bits (69), Expect = 3e-29
 Identities = 114/129 (88%)
 Strand = Plus / Plus

                                                                            
Query: 277      tgcaacgcttttattgttctcctcttccatgtgtcggtctccggttcaaaagtgagctcc 336
                ||||||||||||||| ||| |||||||||||||   ||||| ||||||||  ||||||||
Sbjct: 29502251 tgcaacgcttttattattcccctcttccatgtggaagtctctggttcaaacctgagctcc 29502310

                                                                            
Query: 337      caggtcggccaatagtgaaggtcctgtttcagagtgagcacccgtggtttcccgttcaaa 396
                ||||||||||| ||||||||||||||||||| ||| ||||| || ||||| || ||||||
Sbjct: 29502311 caggtcggccagtagtgaaggtcctgtttcaaagtaagcacacgaggtttgccattcaaa 29502370

                         
Query: 397      tggacggtc 405
                |||||||||
Sbjct: 29502371 tggacggtc 29502379



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 89       aattatccacaggcaatgaa 108
                ||||||||||||||||||||
Sbjct: 29502010 aattatccacaggcaatgaa 29502029
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>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1038_A06
          Length = 147836

 Score =  137 bits (69), Expect = 3e-29
 Identities = 114/129 (88%)
 Strand = Plus / Plus

                                                                         
Query: 277   tgcaacgcttttattgttctcctcttccatgtgtcggtctccggttcaaaagtgagctcc 336
             ||||||||||||||| ||| |||||||||||||   ||||| ||||||||  ||||||||
Sbjct: 97281 tgcaacgcttttattattcccctcttccatgtggaagtctctggttcaaacctgagctcc 97340

                                                                         
Query: 337   caggtcggccaatagtgaaggtcctgtttcagagtgagcacccgtggtttcccgttcaaa 396
             ||||||||||| ||||||||||||||||||| ||| ||||| || ||||| || ||||||
Sbjct: 97341 caggtcggccagtagtgaaggtcctgtttcaaagtaagcacacgaggtttgccattcaaa 97400

                      
Query: 397   tggacggtc 405
             |||||||||
Sbjct: 97401 tggacggtc 97409



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    aattatccacaggcaatgaa 108
             ||||||||||||||||||||
Sbjct: 97040 aattatccacaggcaatgaa 97059
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>dbj|AK065045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001I02, full
            insert sequence
          Length = 3793

 Score =  137 bits (69), Expect = 3e-29
 Identities = 114/129 (88%)
 Strand = Plus / Minus

                                                                        
Query: 277  tgcaacgcttttattgttctcctcttccatgtgtcggtctccggttcaaaagtgagctcc 336
            ||||||||||||||| ||| |||||||||||||   ||||| ||||||||  ||||||||
Sbjct: 3468 tgcaacgcttttattattcccctcttccatgtggaagtctctggttcaaacctgagctcc 3409

                                                                        
Query: 337  caggtcggccaatagtgaaggtcctgtttcagagtgagcacccgtggtttcccgttcaaa 396
            ||||||||||| ||||||||||||||||||| ||| ||||| || ||||| || ||||||
Sbjct: 3408 caggtcggccagtagtgaaggtcctgtttcaaagtaagcacacgaggtttgccattcaaa 3349

                     
Query: 397  tggacggtc 405
            |||||||||
Sbjct: 3348 tggacggtc 3340
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>emb|AL355984.11| Human DNA sequence from clone RP11-501K3 on chromosome 13 Contains the
             GJB6 gene for gap junction protein, beta 6 (connexin 30)
             and 2 CpG islands, complete sequence
          Length = 160536

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 46    aaaatatatgaaataggtacagaaaag 72
             ||||||||||||||| |||||||||||
Sbjct: 74740 aaaatatatgaaatatgtacagaaaag 74714
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>emb|CR382398.1| Plasmodium falciparum chromosome 6, complete sequence; segment 1/5
          Length = 349418

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 40     ataataaaaatatatgaaatagg 62
              |||||||||||||||||||||||
Sbjct: 197399 ataataaaaatatatgaaatagg 197421
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>gb|AC116798.11| Mus musculus chromosome 1, clone RP24-329K22, complete sequence
          Length = 173479

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 191   ttcctcgcctctccatgcttg 211
             |||||||||||||||||||||
Sbjct: 93705 ttcctcgcctctccatgcttg 93685
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>gb|AY318871.1| Canarypox virus strain ATCC VR-111, complete genome
          Length = 359853

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 41    taataaaaatatatgaaataggtacagaa 69
             |||||||| || |||||||||||||||||
Sbjct: 28886 taataaaagtagatgaaataggtacagaa 28858
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>emb|CR847496.7| Zebrafish DNA sequence from clone CH211-203D1 in linkage group 14,
             complete sequence
          Length = 157741

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 40    ataataaaaatatatgaaata 60
             |||||||||||||||||||||
Sbjct: 81427 ataataaaaatatatgaaata 81447
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>gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, complete sequence
          Length = 198281

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 29     gcttctacaggataataaaaatatatgaaatag 61
              ||||||||||||||||||||  | |||||||||
Sbjct: 181059 gcttctacaggataataaaataaaatgaaatag 181027
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>emb|AL713998.7| Human DNA sequence from clone RP11-301G19 on chromosome 6, complete
             sequence
          Length = 184887

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 33    ctacaggataataaaaatata 53
             |||||||||||||||||||||
Sbjct: 88035 ctacaggataataaaaatata 88015
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>gb|AC158753.8| Mus musculus chromosome 5, clone RP23-301E24, complete sequence
          Length = 190368

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 29    gcttctacaggataataaaaatatatgaaatag 61
             ||||||||||||||||||||  | |||||||||
Sbjct: 18421 gcttctacaggataataaaataaaatgaaatag 18389
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>gb|AC023904.10| Homo sapiens chromosome 10 clone RP11-369L1, complete sequence
          Length = 190712

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 40     ataataaaaatatatgaaata 60
              |||||||||||||||||||||
Sbjct: 107659 ataataaaaatatatgaaata 107679
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>gb|AC131005.3| Homo sapiens 3 BAC RP11-88K11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 191231

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 27     ttgcttctacaggataataaaaatatatg 55
              ||||||||||| || ||||||||||||||
Sbjct: 109828 ttgcttctacatgagaataaaaatatatg 109800
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>emb|AL954143.9| Zebrafish DNA sequence from clone CH211-206A7 in linkage group 19,
             complete sequence
          Length = 168515

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 40    ataataaaaatatatgaaata 60
             |||||||||||||||||||||
Sbjct: 66230 ataataaaaatatatgaaata 66250
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>emb|CR759813.6| Zebrafish DNA sequence from clone DKEY-150H10 in linkage group 18,
             complete sequence
          Length = 152902

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 40    ataataaaaatatatgaaata 60
             |||||||||||||||||||||
Sbjct: 47337 ataataaaaatatatgaaata 47317
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>gb|AC142502.3| Mus musculus BAC clone RP24-530L11 from 3, complete sequence
          Length = 160259

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 201    ctccatgcttggccttcctaa 221
              |||||||||||||||||||||
Sbjct: 124107 ctccatgcttggccttcctaa 124087
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>gb|AC137127.11| Mus musculus chromosome 9, clone RP24-264F17, complete sequence
          Length = 181842

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 350   agtgaaggtcctgtttcagagtga 373
             |||||||||||||| |||||||||
Sbjct: 63810 agtgaaggtcctgtgtcagagtga 63833
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>ref|NM_012674.1| Rattus norvegicus serine protease inhibitor, Kazal type 1 (Spink1),
            mRNA
          Length = 2338

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 40   ataataaaaatatatgaaat 59
            ||||||||||||||||||||
Sbjct: 2301 ataataaaaatatatgaaat 2320
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>gb|AC150162.1| Solanum demissum chromosome 5 clone PGEC160O2 map MAP_LOC, complete
             sequence
          Length = 125813

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    taataaaaatatatgaaata 60
             ||||||||||||||||||||
Sbjct: 65736 taataaaaatatatgaaata 65717
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>gb|AC009394.5| Drosophila melanogaster clone BACR03J17, complete sequence
          Length = 199043

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    ataaaaatatatgaaatagg 62
             ||||||||||||||||||||
Sbjct: 26393 ataaaaatatatgaaatagg 26412
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>gb|AC009462.7| Drosophila melanogaster clone BACR27G04, complete sequence
          Length = 151609

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     ataaaaatatatgaaatagg 62
              ||||||||||||||||||||
Sbjct: 106463 ataaaaatatatgaaatagg 106482
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>gb|AC138330.4| Mus musculus BAC clone RP23-19L20 from chromosome 13, complete sequence
          Length = 190901

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     gataataaaaatatatgaaa 58
              ||||||||||||||||||||
Sbjct: 173690 gataataaaaatatatgaaa 173671
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>gb|AC132270.3| Mus musculus BAC clone RP24-338C23 from chromosome 5, complete sequence
          Length = 145471

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    ataataaaaatatatgaaat 59
             ||||||||||||||||||||
Sbjct: 15740 ataataaaaatatatgaaat 15721
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>ref|XM_001003764.1| PREDICTED: Mus musculus gamma-aminobutyric acid (GABA) receptor,
           rho 3, transcript variant 2 (Gabrr3), mRNA
          Length = 1456

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 171 gcatcgacagcatttcagag 190
           ||||||||||||||||||||
Sbjct: 269 gcatcgacagcatttcagag 288
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>ref|XM_917722.2| PREDICTED: Mus musculus gamma-aminobutyric acid (GABA) receptor,
           rho 3, transcript variant 3 (Gabrr3), mRNA
          Length = 1456

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 171 gcatcgacagcatttcagag 190
           ||||||||||||||||||||
Sbjct: 269 gcatcgacagcatttcagag 288
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>ref|XM_285181.6| PREDICTED: Mus musculus gamma-aminobutyric acid (GABA) receptor,
           rho 3, transcript variant 1 (Gabrr3), mRNA
          Length = 1456

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 171 gcatcgacagcatttcagag 190
           ||||||||||||||||||||
Sbjct: 269 gcatcgacagcatttcagag 288
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>gb|AC123840.4| Mus musculus BAC clone RP23-399K5 from chromosome 13, complete sequence
          Length = 191185

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    gataataaaaatatatgaaa 58
             ||||||||||||||||||||
Sbjct: 30797 gataataaaaatatatgaaa 30778
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>gb|AC122016.4| Mus musculus BAC clone RP24-359J23 from chromosome 16, complete
             sequence
          Length = 163943

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    acaggataataaaaatatat 54
             ||||||||||||||||||||
Sbjct: 88449 acaggataataaaaatatat 88430
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>gb|AC157800.9| Mus musculus chromosome 1, clone RP24-286C21, complete sequence
          Length = 164708

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    ataataaaaatatatgaaat 59
             ||||||||||||||||||||
Sbjct: 29776 ataataaaaatatatgaaat 29795
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>emb|AL513166.7| Human DNA sequence from clone RP11-261J10 on chromosome 1, complete
             sequence
          Length = 170817

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   tggccttcctaaagaaggcc 229
             ||||||||||||||||||||
Sbjct: 13243 tggccttcctaaagaaggcc 13262
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>gb|AC069504.7| Homo sapiens 3 BAC RP11-263A24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 39624

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    ataaaaatatatgaaatagg 62
             ||||||||||||||||||||
Sbjct: 30433 ataaaaatatatgaaatagg 30452
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>gb|AC090671.5| Homo sapiens 12 BAC RP11-755O11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 186298

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    aaaaatatatgaaataggta 64
             ||||||||||||||||||||
Sbjct: 16813 aaaaatatatgaaataggta 16832
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>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces
               hansenii
          Length = 2037969

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 41      taataaaaatatatgaaata 60
               ||||||||||||||||||||
Sbjct: 1475497 taataaaaatatatgaaata 1475478
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>gb|AC091096.7| Homo sapiens chromosome 8, clone RP11-587H10, complete sequence
          Length = 207630

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    gcccactgaaaatatcacaa 246
              ||||||||||||||||||||
Sbjct: 185838 gcccactgaaaatatcacaa 185819
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>gb|AC090506.7| Homo sapiens chromosome 18, clone RP11-675P14, complete sequence
          Length = 188609

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    gcttctacaggataataaaaatat 52
             ||||||||||||||||| ||||||
Sbjct: 82368 gcttctacaggataatacaaatat 82345
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>emb|AL805942.5| Mouse DNA sequence from clone RP24-71G5 on chromosome 2, complete
             sequence
          Length = 81209

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    taataaaaatatatgaaata 60
             ||||||||||||||||||||
Sbjct: 79111 taataaaaatatatgaaata 79130
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>gb|AY040765.1| Mus musculus histidine triad protein 3 gene, complete cds
          Length = 2916

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 43   ataaaaatatatgaaatagg 62
            ||||||||||||||||||||
Sbjct: 2901 ataaaaatatatgaaatagg 2882
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>gb|AY998454.1| Solanum pectinatum voucher Peeke 8512 IND tRNA-Ser (trnS) gene,
           partial sequence; trnS-trnG intergenic spacer, complete
           sequence; and tRNA-Gly (trnG) gene, partial sequence;
           chloroplast
          Length = 688

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  aataaaaatatatgaaatag 61
           ||||||||||||||||||||
Sbjct: 431 aataaaaatatatgaaatag 450
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>gb|AC009709.7|AC009709 Homo sapiens chromosome 18, clone RP11-319O9, complete sequence
          Length = 187615

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 25    tattgcttctacaggataataaaa 48
             ||||||||| ||||||||||||||
Sbjct: 66177 tattgcttccacaggataataaaa 66200
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>gb|AC022193.5|AC022193 Homo sapiens, clone RP11-23B3, complete sequence
          Length = 184228

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 227    gcccactgaaaatatcacaa 246
              ||||||||||||||||||||
Sbjct: 106215 gcccactgaaaatatcacaa 106234
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>gb|AC154854.2| Mus musculus BAC clone RP23-23O4 from chromosome 16, complete sequence
          Length = 209970

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 171    gcatcgacagcatttcagag 190
              ||||||||||||||||||||
Sbjct: 118975 gcatcgacagcatttcagag 118994
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>gb|AC018878.8| Homo sapiens BAC clone RP11-297N12 from 2, complete sequence
          Length = 170801

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     taataaaaatatatgaaata 60
              ||||||||||||||||||||
Sbjct: 127695 taataaaaatatatgaaata 127714
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>gb|AC007274.3|AC007274 Homo sapiens BAC clone RP11-105L10 from Y, complete sequence
          Length = 117309

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 117   gtcatctattgaattacactatatccta 144
             ||||| ||||||||||||||||| ||||
Sbjct: 55997 gtcatttattgaattacactataaccta 55970
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>gb|AC006195.1|AC006195 Homo sapiens clone RP11-350H1 from 7p14-15, complete sequence
          Length = 150242

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     ataaaaatatatgaaatagg 62
              ||||||||||||||||||||
Sbjct: 140438 ataaaaatatatgaaatagg 140457
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     ttctacaggataataaaaat 50
              ||||||||||||||||||||
Sbjct: 281695 ttctacaggataataaaaat 281714
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>gb|AC007911.8|AC007911 Homo sapiens chromosome 18, clone RP11-520K18, complete sequence
          Length = 160299

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 25    tattgcttctacaggataataaaa 48
             ||||||||| ||||||||||||||
Sbjct: 59912 tattgcttccacaggataataaaa 59935
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>gb|AE003721.3| Drosophila melanogaster chromosome 3R, section 59 of 118 of the
             complete sequence
          Length = 224889

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    ataaaaatatatgaaatagg 62
             ||||||||||||||||||||
Sbjct: 46887 ataaaaatatatgaaatagg 46906
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>emb|AL732626.8| Mouse DNA sequence from clone RP23-191F22 on chromosome 4, complete
             sequence
          Length = 151688

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    ataaaaatatatgaaatagg 62
             ||||||||||||||||||||
Sbjct: 91473 ataaaaatatatgaaatagg 91492
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>gb|M35299.1|RATPSTIAA Rat pancreatic secretory trypsin inhibitor-like protein (PSTI) mRNA,
            complete cds
          Length = 2338

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 40   ataataaaaatatatgaaat 59
            ||||||||||||||||||||
Sbjct: 2301 ataataaaaatatatgaaat 2320


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,241,985
Number of Sequences: 3902068
Number of extensions: 4241985
Number of successful extensions: 94586
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94438
Number of HSP's gapped (non-prelim): 148
length of query: 410
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 388
effective length of database: 17,147,199,772
effective search space: 6653113511536
effective search space used: 6653113511536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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