>CSD_PSEPK (Q9Z408) Probable cysteine desulfurase (EC 2.8.1.7)|
          Length = 401

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +1

Query: 217 QLSTGNEILMSSIELHYILVPTLTLAHRHRQHFRVPRLSMLG 342
           +L  G+EI +S++E H  L+P   LAHR   H  V  L   G
Sbjct: 106 RLEAGDEIAISALEHHANLLPWQQLAHRRNLHLVVLPLDAHG 147

>LY86_HUMAN (O95711) Lymphocyte antigen 86 precursor (MD-1 protein)|
          Length = 162

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -2

Query: 93  FLDIGVMIPSHSVFGPSYSVCEAFLPGLGPC 1
           FLD+ +M    SV   SY +CEA LP    C
Sbjct: 82  FLDLALMSQGSSVLNFSYPICEAALPKFSFC 112

>GIDA_PELUB (Q4FNR6) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 623

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 93  TANKVLCGKIVETRAKSLNGLLLLQDNKNI*NRYRK 200
           +  K+LCGK++ T    LNGL+ + D +    R+ +
Sbjct: 142 SGKKILCGKLILTTGTFLNGLIHIGDERTPAGRFNE 177

>6PGL_BUCAP (Q8K9N9) 6-phosphogluconolactonase (EC 3.1.1.31)|
           (6-P-gluconolactonase)
          Length = 333

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = +3

Query: 9   QVLEGKLHIQNSLVQKLNDWVSSPLYPETANKVLCGKIVETRAKSLNGLLLLQDNKN 179
           +VLE K +IQN  ++ LND +S   +    +   CG  +    + LN + L   NKN
Sbjct: 210 KVLEVK-NIQN--IKLLNDLISKKYWSSDIHLTSCGNFLYVSDRYLNSISLFHVNKN 263

>NRFA_ECOLI (P0ABK9) Cytochrome c-552 precursor (EC 1.7.2.2) (Ammonia-forming|
           cytochrome c nitrite reductase) (Cytochrome c nitrite
           reductase)
          Length = 478

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +3

Query: 3   KVQVLEGKLHIQNSLVQKLNDWVSSPLYPETANKVLCGKIVETRAKSLNGL 155
           KVQ  EGKL+  + +    +++  +     T +K    K+V  R +S+N L
Sbjct: 289 KVQNAEGKLYTDHKIGNPFDNFAQTCANCHTQDKAALQKVVAERKQSINDL 339

>NRFA_ECO57 (P0ABL0) Cytochrome c-552 precursor (EC 1.7.2.2) (Ammonia-forming|
           cytochrome c nitrite reductase) (Cytochrome c nitrite
           reductase)
          Length = 478

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +3

Query: 3   KVQVLEGKLHIQNSLVQKLNDWVSSPLYPETANKVLCGKIVETRAKSLNGL 155
           KVQ  EGKL+  + +    +++  +     T +K    K+V  R +S+N L
Sbjct: 289 KVQNAEGKLYTDHKIGNPFDNFAQTCANCHTQDKAALQKVVAERKQSINDL 339

>CUT9_SCHPO (P41889) 20S cyclosome/APC complex protein cut9 (Cell untimely torn|
           protein 9)
          Length = 671

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +1

Query: 163 YRIIKIYEIGTEKTHPAVQLSTGNEILMSSIELHYI--LVPTLTLAHRH 303
           YR +K+Y+   +  +  + LST +  + ++I L Y+   +P L + H H
Sbjct: 526 YRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLAITHLH 574

>OXAA2_STRPN (Q97NP5) Membrane protein oxaA 2 precursor|
          Length = 308

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 19/89 (21%), Positives = 39/89 (43%)
 Frame = +1

Query: 82  YIQKLQTKYSAEK*SRREQNR*MVYCFYRIIKIYEIGTEKTHPAVQLSTGNEILMSSIEL 261
           Y+Q L + +  E   +REQ + M+Y    +I ++ + +  +     +  G  +++    +
Sbjct: 189 YLQSLLSLHGVEDEMQREQIKKMIYMSPLMIVVFSLFSPASVTLYWVVGGFMMILQQFIV 248

Query: 262 HYILVPTLTLAHRHRQHFRVPRLSMLGLP 348
           +YI+ P L    R       P+ S    P
Sbjct: 249 NYIVRPKLRKKVREELAKNPPKASAFSKP 277

>NU2C_SISMO (Q67ID9) NAD(P)H-quinone oxidoreductase chain 2, chloroplast (EC|
           1.6.5.-) (NAD(P)H dehydrogenase, chain 2)
           (NADH-plastoquinone oxidoreductase chain 2)
          Length = 510

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +2

Query: 74  ITPISRNCKQSTLRKNSRDESKIAKWFIAST 166
           ITP  RN ++STLR N+  E  +    IAST
Sbjct: 462 ITPHVRNYRRSTLRSNNSIEWSMTVCVIAST 492

>MYBF_ARATH (Q700D9) Putative Myb family transcription factor At1g14600|
          Length = 255

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +1

Query: 211 AVQLSTGNEILMSSIELHYILVPTLTLAH--RHRQHFRVPRLSMLGLPKEGPLKISQQGR 384
           AV L  G       + L  + V  LT++H   H Q +R  R+++LG P+E     S++ R
Sbjct: 39  AVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYRGSRITLLGKPEESSSPSSRRRR 98


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,621,667
Number of Sequences: 219361
Number of extensions: 1033453
Number of successful extensions: 2497
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2497
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)