Clone Name | rbastl17a12 |
---|---|
Clone Library Name | barley_pub |
>PAR6G_HUMAN (Q9BYG4) Partitioning defective 6 homolog gamma (PAR-6 gamma)| (PAR6D) Length = 376 Score = 34.3 bits (77), Expect = 0.079 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 9/77 (11%) Frame = +1 Query: 1 KPSSTESMYTTAKQQHHHDNDDRPLL-------LLILKHSTRLCEPTARSISP--RVFPE 153 KP E Y HH N D + LL + + C+ + S +P RVF + Sbjct: 38 KPGKFEDFYKLVVHTHHISNSDVTIGYADVHGDLLPINNDDNFCKAVS-SANPLLRVFIQ 96 Query: 154 ARSYSGRGCAGAGLLCR 204 R + RG GAG LCR Sbjct: 97 KREEAERGSLGAGSLCR 113
>CAPP_THET8 (Q5SKL7) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 858 Score = 30.0 bits (66), Expect = 1.5 Identities = 22/55 (40%), Positives = 27/55 (49%) Frame = -3 Query: 312 QALANVSDEVQGGPPSYFFACAGTSTDDRALN*GGKPAKKTSTSTAPA*IRPRFR 148 +AL+ V +EV G P YFF GTST GG PA + S P + R R Sbjct: 547 EALSRVGEEV--GLPVYFFHGRGTSTAR-----GGGPAGRAIASLPPRSVGRRIR 594
>CAPP_THET2 (Q72L05) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 858 Score = 30.0 bits (66), Expect = 1.5 Identities = 22/55 (40%), Positives = 27/55 (49%) Frame = -3 Query: 312 QALANVSDEVQGGPPSYFFACAGTSTDDRALN*GGKPAKKTSTSTAPA*IRPRFR 148 +AL+ V +EV G P YFF GTST GG PA + S P + R R Sbjct: 547 EALSRVGEEV--GLPVYFFHGRGTSTAR-----GGGPAGRAIASLPPRSVGRRIR 594
>KAP3_BOVIN (P31322) cAMP-dependent protein kinase type II-beta regulatory| subunit Length = 417 Score = 28.5 bits (62), Expect = 4.3 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = +1 Query: 73 LLLLILKHSTRLCEPTARSISPRVFPEARSYSGRGCAGAG 192 LL L+H TRL E R + R E R++ G AG G Sbjct: 27 LLEFALQHFTRLQEENERKGTARFGHEGRTWGDAGAAGGG 66
>TSC10_YARLI (Q6CE86) 3-ketodihydrosphingosine reductase TSC10 (EC 1.1.1.102)| (3-dehydrosphinganine reductase) (KDS reductase) Length = 372 Score = 28.1 bits (61), Expect = 5.7 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = -3 Query: 336 TADIVRLIQALANVSDEVQGGPPSYFFACAGTS 238 +AD+ + +A+ S+E PP F+CAG + Sbjct: 121 SADLTKEEEAIRVFSEETMPAPPDVIFSCAGAA 153
>FBXW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein| 7) (F-box protein FBW7) (F-box protein Fbxw6) (F-box-WD40 repeat protein 6) (SEL-10) Length = 629 Score = 27.7 bits (60), Expect = 7.4 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = +3 Query: 153 SAVLFRPGLCWCWSSLPAFPLNSAP 227 S+VL +CWCW L PL + P Sbjct: 7 SSVLVLSCVCWCWGVLLPVPLPNLP 31 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,821,400 Number of Sequences: 219361 Number of extensions: 640541 Number of successful extensions: 1628 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1616 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1626 length of database: 80,573,946 effective HSP length: 88 effective length of database: 61,270,178 effective search space used: 1470484272 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)