Clone Name | rbastl17a11 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
---|---|---|---|
1 | MURB_AGRT5 (Q8UDN0) UDP-N-acetylenolpyruvoylglucosamine reductas... | 30 | 3.1 |
2 | QORX_HUMAN (Q53FA7) Putative quinone oxidoreductase (EC 1.-.-.-)... | 28 | 8.9 |
3 | THYG_HUMAN (P01266) Thyroglobulin precursor | 28 | 8.9 |
>MURB_AGRT5 (Q8UDN0) UDP-N-acetylenolpyruvoylglucosamine reductase (EC| 1.1.1.158) (UDP-N-acetylmuramate dehydrogenase) Length = 321 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%) Frame = +1 Query: 340 RHQTGA----NPPPDTAFKLLQEWHGRGLIPGPT*QSSVH 447 R QTG NP +A++L+ E GRGL+ G SS+H Sbjct: 226 REQTGGSTFKNPEGHSAWELIDEAGGRGLVIGGAQMSSLH 265
>QORX_HUMAN (Q53FA7) Putative quinone oxidoreductase (EC 1.-.-.-) (Tumor| protein p53-inducible protein 3) (p53-induced protein 3) Length = 332 Score = 28.5 bits (62), Expect = 8.9 Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 10/72 (13%) Frame = -2 Query: 366 WRIGSSLVALL-GSYQAQYFVVVEKSLNSFRSG-----SAALP----*MYHLLFLALVIS 217 W+IG + +ALL G QAQY V E L G +AA+P + LL L + Sbjct: 80 WKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQ 139 Query: 216 AVCRILYEAGCS 181 A +L AG S Sbjct: 140 AGDYVLIHAGLS 151
>THYG_HUMAN (P01266) Thyroglobulin precursor| Length = 2768 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 9/59 (15%) Frame = +1 Query: 259 QSR*TRAKRIQTLLNNNKILSLV---------TAEQRHQTGANPPPDTAFKLLQEWHGR 408 QS + +Q LL+N+ +L + T Q Q N PP+ F+L Q W + Sbjct: 733 QSEQAFLRTVQALLSNSSMLPTLSDTYIPQCSTDGQWRQVQCNGPPEQVFELYQRWEAQ 791 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,467,192 Number of Sequences: 219361 Number of extensions: 1365793 Number of successful extensions: 2988 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2898 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2988 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)