ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl17a09 |
|---|---|
| Clone Library Name | barley_pub |
>PLDD1_ARATH (Q9C5Y0) Phospholipase D delta (EC 3.1.4.4) (AtPLDdelta) (PLD| delta) Length = 868 Score = 84.3 bits (207), Expect = 1e-16 Identities = 38/66 (57%), Positives = 51/66 (77%), Gaps = 1/66 (1%) Frame = -2 Query: 452 VNQIAEDNWERFASEEMKMLQGHLLRYPVKVEPDGKIVPLPDQECFPDAGGKICGAPT-S 276 VN I+E+NW+RF + LQGHL++YP++V+ DGK+ PLPD E FPD GGKI GA + + Sbjct: 802 VNTISEENWKRFIDPKFSELQGHLIKYPLQVDVDGKVSPLPDYETFPDVGGKIIGAHSMA 861 Query: 275 LPDSLT 258 LPD+LT Sbjct: 862 LPDTLT 867
>PLDB2_ARATH (O23078) Phospholipase D beta 2 (EC 3.1.4.4) (AtPLDbeta2) (PLD beta| 2) (PLDdelta1) Length = 915 Score = 75.5 bits (184), Expect = 6e-14 Identities = 31/66 (46%), Positives = 49/66 (74%) Frame = -2 Query: 452 VNQIAEDNWERFASEEMKMLQGHLLRYPVKVEPDGKIVPLPDQECFPDAGGKICGAPTSL 273 V +AE+NWE+F SEE+ ++GHL++YPV+V+ GK+ PLP E FPD GG + G+ ++ Sbjct: 850 VRTVAEENWEQFRSEEVSEMRGHLMKYPVEVDRKGKVRPLPGSEEFPDVGGNVVGSFLAI 909 Query: 272 PDSLTM 255 ++LT+ Sbjct: 910 QENLTI 915
>PLDB1_ARATH (P93733) Phospholipase D beta 1 (EC 3.1.4.4) (AtPLDbeta1) (PLD beta| 1) (PLDbeta) Length = 967 Score = 72.4 bits (176), Expect = 5e-13 Identities = 31/66 (46%), Positives = 47/66 (71%) Frame = -2 Query: 452 VNQIAEDNWERFASEEMKMLQGHLLRYPVKVEPDGKIVPLPDQECFPDAGGKICGAPTSL 273 V + E NW++FA+EE+ ++GHLL+YPV+V+ GK+ PLP E FPD GG I G ++ Sbjct: 902 VRTMGERNWKQFAAEEVSDMRGHLLKYPVEVDRKGKVRPLPGSETFPDVGGNIVGTFIAI 961 Query: 272 PDSLTM 255 ++LT+ Sbjct: 962 QENLTI 967
>PLDG1_ARATH (Q9T053) Phospholipase D gamma 1 (EC 3.1.4.4) (AtPLDgamma1) (PLD| gamma 1) (Choline phosphatase) (Lipophosphodiesterase II) (Lecithinase D) Length = 858 Score = 71.6 bits (174), Expect = 9e-13 Identities = 32/66 (48%), Positives = 48/66 (72%) Frame = -2 Query: 452 VNQIAEDNWERFASEEMKMLQGHLLRYPVKVEPDGKIVPLPDQECFPDAGGKICGAPTSL 273 V Q++E NW ++A+EE+ + GHLL+YPV+V+ GK+ LP E FPD GGKI G+ +L Sbjct: 793 VRQLSELNWRQYAAEEVTEMSGHLLKYPVQVDRTGKVSSLPGCETFPDLGGKIIGSFLAL 852 Query: 272 PDSLTM 255 ++LT+ Sbjct: 853 QENLTI 858
>PLDG2_ARATH (Q9T051) Phospholipase D gamma 2 (EC 3.1.4.4) (AtPLDgamma2) (PLD| gamma 2) Length = 824 Score = 71.2 bits (173), Expect = 1e-12 Identities = 32/66 (48%), Positives = 48/66 (72%) Frame = -2 Query: 452 VNQIAEDNWERFASEEMKMLQGHLLRYPVKVEPDGKIVPLPDQECFPDAGGKICGAPTSL 273 V Q++E NW ++A+EE+ + GHLL+YPV+V+ GK+ LP E FPD GGKI G+ +L Sbjct: 759 VRQLSELNWGQYAAEEVTEMSGHLLKYPVQVDKTGKVSSLPGCETFPDLGGKIIGSFLTL 818 Query: 272 PDSLTM 255 ++LT+ Sbjct: 819 QENLTI 824
>PLDG3_ARATH (Q9T052) Phospholipase D gamma 3 (EC 3.1.4.4) (AtPLDgamma3) (PLD| gamma 3) Length = 866 Score = 69.7 bits (169), Expect = 3e-12 Identities = 31/66 (46%), Positives = 47/66 (71%) Frame = -2 Query: 452 VNQIAEDNWERFASEEMKMLQGHLLRYPVKVEPDGKIVPLPDQECFPDAGGKICGAPTSL 273 V Q++E NW ++A+EE+ + GHLL+YPV+V+ GK+ LP E FPD GGKI G+ + Sbjct: 801 VRQLSELNWRQYAAEEVTEMPGHLLKYPVQVDRTGKVSSLPGYETFPDLGGKIIGSFLVV 860 Query: 272 PDSLTM 255 ++LT+ Sbjct: 861 EENLTI 866
>PLDA1_VIGUN (O04865) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 809 Score = 58.5 bits (140), Expect = 8e-09 Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 2/67 (2%) Frame = -2 Query: 452 VNQIAEDNWERFASEEMKM-LQGHLLRYPVKVEPDGKIVPLPDQECFPDAGGKICGAPTS 276 VNQIA+ W+ ++SE ++ L GHLLRYP+ V +G++ LP E FPD +I GA Sbjct: 742 VNQIADKYWDLYSSESLERDLPGHLLRYPIGVASEGEVTELPGFEFFPDTKARILGAKAD 801 Query: 275 -LPDSLT 258 LP LT Sbjct: 802 YLPPILT 808
>PLDA1_RICCO (Q41142) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 57.8 bits (138), Expect = 1e-08 Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 2/67 (2%) Frame = -2 Query: 452 VNQIAEDNWERFASEEMKM-LQGHLLRYPVKVEPDGKIVPLPDQECFPDAGGKICGAPTS 276 VNQ+AE W+ ++SE ++ L GHLLRYP+ V +G + LP E FPD ++ GA + Sbjct: 741 VNQMAEKYWDLYSSETLEHDLPGHLLRYPIGVASEGDVTELPGTEFFPDTKARVLGAKSD 800 Query: 275 -LPDSLT 258 LP LT Sbjct: 801 YLPPILT 807
>PLDA1_ORYSA (Q43007) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD alpha| 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 812 Score = 57.0 bits (136), Expect = 2e-08 Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 2/67 (2%) Frame = -2 Query: 452 VNQIAEDNWERFASEEMKM-LQGHLLRYPVKVEPDGKIVPLPDQECFPDAGGKICGAPTS 276 VN+IAE W+ ++S++++ L GHLL YP+ V DG + LP E FPD ++ GA + Sbjct: 745 VNRIAEKYWDMYSSDDLQQDLPGHLLSYPIGVASDGVVTELPGMEYFPDTRARVLGAKSD 804 Query: 275 -LPDSLT 258 +P LT Sbjct: 805 YMPPILT 811
>PLDA1_PIMBR (O04883) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 55.8 bits (133), Expect = 5e-08 Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 2/67 (2%) Frame = -2 Query: 452 VNQIAEDNWERFASEEMKM-LQGHLLRYPVKVEPDGKIVPLPDQECFPDAGGKICGAPTS 276 VN +A+ W+ ++SE ++ L GHLLRYP+ V +G + LP E FPD ++ GA + Sbjct: 741 VNTVADKYWDLYSSETLENDLPGHLLRYPIAVASEGNVTELPGTEFFPDTKARVLGAKSD 800 Query: 275 -LPDSLT 258 LP LT Sbjct: 801 FLPPILT 807
>PLDA2_ORYSA (P93844) Phospholipase D alpha 2 (EC 3.1.4.4) (PLD alpha 2)| (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 818 Score = 55.8 bits (133), Expect = 5e-08 Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%) Frame = -2 Query: 452 VNQIAEDNWERFASEEMKM-LQGHLLRYPVKVEPDGKIVPLPDQECFPDAGGKICGAPTS 276 VN++A+ W+ +AS+E+ L GHLL YPV+V +G + LP + FPD + G + Sbjct: 752 VNKMADKYWDLYASDELNDDLPGHLLTYPVRVTKEGTVTELPGAKFFPDTQAPVIGTKGN 811 Query: 275 LPDSLT 258 LP LT Sbjct: 812 LPPFLT 817
>PLDA2_BRAOC (P55939) Phospholipase D alpha 2 precursor (EC 3.1.4.4) (PLD 2)| (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 812 Score = 55.8 bits (133), Expect = 5e-08 Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 2/67 (2%) Frame = -2 Query: 452 VNQIAEDNWERFASEEMKM-LQGHLLRYPVKVEPDGKIVPLPDQECFPDAGGKICGAPTS 276 VN+IA+ W+ ++SE ++ L GHLLRYP+ V+ +G I LP E FPD+ +I G Sbjct: 745 VNRIADKYWDFYSSESLEHDLPGHLLRYPISVDNEGNITELPGFEFFPDSKARILGNKVD 804 Query: 275 -LPDSLT 258 LP LT Sbjct: 805 YLPPILT 811
>PLDA1_MAIZE (Q43270) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 812 Score = 55.5 bits (132), Expect = 6e-08 Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 2/67 (2%) Frame = -2 Query: 452 VNQIAEDNWERFASEEMKM-LQGHLLRYPVKVEPDGKIVPLPDQECFPDAGGKICGAPTS 276 VN++AE W+ ++S++++ L GHLL YP+ V DG + LP E FPD ++ G + Sbjct: 745 VNEVAEKYWDLYSSDDLEQDLPGHLLSYPIGVTADGSVTELPGMENFPDTRARVLGNKSD 804 Query: 275 -LPDSLT 258 LP LT Sbjct: 805 YLPPILT 811
>PLDA1_TOBAC (P93400) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 53.9 bits (128), Expect = 2e-07 Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 2/67 (2%) Frame = -2 Query: 452 VNQIAEDNWERFASEEMKM-LQGHLLRYPVKVEPDGKIVPLPDQECFPDAGGKICGAPTS 276 VN++A+ W+ ++SE ++ L GHLLRYP+ V +G + LP E FPD ++ G + Sbjct: 741 VNRMADKYWDLYSSESLERDLPGHLLRYPIGVASEGDVTELPGAEHFPDTKARVLGTKSD 800 Query: 275 -LPDSLT 258 LP LT Sbjct: 801 YLPPILT 807
>PLDA2_ARATH (Q9SSQ9) Phospholipase D alpha 2 (EC 3.1.4.4) (AtPLDalpha2) (PLD| alpha 2) (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 810 Score = 53.9 bits (128), Expect = 2e-07 Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 2/67 (2%) Frame = -2 Query: 452 VNQIAEDNWERFASEEMKM-LQGHLLRYPVKVEPDGKIVPLPDQECFPDAGGKICGAPTS 276 VN++A+ W+ ++SE ++ L GHLLRYP+ + +G I LP E FPD +I G + Sbjct: 743 VNRVADKYWDLYSSESLEHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILGVKSD 802 Query: 275 -LPDSLT 258 +P LT Sbjct: 803 YMPPILT 809
>PLDA1_BRAOC (O82549) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 810 Score = 53.5 bits (127), Expect = 2e-07 Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 2/67 (2%) Frame = -2 Query: 452 VNQIAEDNWERFASEEMKM-LQGHLLRYPVKVEPDGKIVPLPDQECFPDAGGKICGAPTS 276 VN+I++ W+ ++SE ++ L GHLLRYPV V+ +G + P E FPD +I G + Sbjct: 743 VNRISDKYWDLYSSESLEHDLPGHLLRYPVDVDGEGDVTEFPGFEFFPDTKARILGTKSD 802 Query: 275 -LPDSLT 258 LP LT Sbjct: 803 YLPPILT 809
>PLDA1_ARATH (Q38882) Phospholipase D alpha 1 (EC 3.1.4.4) (AtPLDalpha1) (PLD| alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) (PLDalpha) Length = 810 Score = 53.5 bits (127), Expect = 2e-07 Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 2/67 (2%) Frame = -2 Query: 452 VNQIAEDNWERFASEEMKM-LQGHLLRYPVKVEPDGKIVPLPDQECFPDAGGKICGAPTS 276 VN+I++ W+ ++SE ++ L GHLLRYP+ V +G I LP E FPD +I G + Sbjct: 743 VNRISDKYWDFYSSESLEHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGTKSD 802 Query: 275 -LPDSLT 258 LP LT Sbjct: 803 YLPPILT 809
>PLDZ1_ARATH (P58766) Phospholipase D zeta (EC 3.1.4.4) (AtPLDzeta) (PLD zeta)| Length = 820 Score = 46.2 bits (108), Expect = 4e-05 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 4/70 (5%) Frame = -2 Query: 455 LVNQIAEDNWERFASEEMKM---LQGHLLRYPVKVEPDGKIVPLPDQECFPDAGGKICGA 285 +VN A++ W ++++E L GHLL YP+ + +G++ L E FPD K+ G Sbjct: 750 MVNATADELWGLYSAQEYPRNDDLPGHLLSYPISIGSNGEVTNLAGTEFFPDTNAKVVGE 809 Query: 284 PTS-LPDSLT 258 ++ LP LT Sbjct: 810 KSNYLPPILT 819
>A2AP_BOVIN (P28800) Alpha-2-antiplasmin precursor (Alpha-2-plasmin inhibitor)| (Alpha-2-PI) (Alpha-2-AP) Length = 492 Score = 35.8 bits (81), Expect = 0.053 Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 6/125 (4%) Frame = +3 Query: 3 LAKLSIDPVLSHVQT-VEKKILQRRTTLQHTVNSPCFPYTPHNV*STDYGAGYHHPLARQ 179 L+ LS+ LSH+ + + LQR + H + PC P+ + D G G AR Sbjct: 109 LSPLSVALALSHLALGAQNQTLQRLKEVLHADSGPCLPHLLSRL-CQDLGPGAFRLAARM 167 Query: 180 DIQRGFT-----GEQNNQLGL*REVSTVTSHRQRIRKRGRGAADLATGVGEAFLVGQRDD 344 +Q+GF EQ+ QL + +S + + R + G E FL DD Sbjct: 168 YLQKGFPIKEDFLEQSEQLFGAKPMSLTGMKGEDLANINRWVKEATEGKIEDFLSDLPDD 227 Query: 345 LTIRL 359 + L Sbjct: 228 TVLLL 232
>PLDE1_ARATH (Q9C888) Phospholipase D epsilon (EC 3.1.4.4) (AtPLDepsilon) (PLD| epsilon) (PLDalpha3) Length = 762 Score = 35.0 bits (79), Expect = 0.090 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%) Frame = -2 Query: 443 IAEDNWERFASEEM-KMLQGHLLRYPVKVEPDGKIVPLPDQECFPDAGGKICGAPTSL-P 270 I E WE ++ +++ ML HL+ YP+ V DG + + D CFPD + G + + P Sbjct: 699 IGEQMWEIYSGDKVVDMLGIHLVAYPISVTGDGAVEEVGD-GCFPDTKTLVKGKRSKMFP 757 Query: 269 DSLT 258 LT Sbjct: 758 PVLT 761
>IRS1_RAT (P35570) Insulin receptor substrate 1 (IRS-1) (pp185)| Length = 1235 Score = 32.3 bits (72), Expect = 0.58 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -2 Query: 377 RYPVKVEPDGKIVPLPDQECFPDAGGKICGA 285 R+P +V+P+G ++ P C PD GG C + Sbjct: 648 RHPQRVDPNGYMMMSPSGSCSPDIGGGSCSS 678
>RL33_AQUAE (O67756) 50S ribosomal protein L33| Length = 50 Score = 31.2 bits (69), Expect = 1.3 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Frame = +2 Query: 32 VSCTDCRKKNLTKAHNSTTHREQPVLSLYATQC---VIHR 142 ++CT+C+++N T N H E+ L Y C IHR Sbjct: 8 LACTECKRRNYTTTKNKQKHPERLELRKYCKWCRKHTIHR 47
>IRS1_MOUSE (P35569) Insulin receptor substrate 1 (IRS-1)| Length = 1233 Score = 30.0 bits (66), Expect = 2.9 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -2 Query: 377 RYPVKVEPDGKIVPLPDQECFPDAGG 300 R+P +V+P+G ++ P C PD GG Sbjct: 648 RHPQRVDPNGYMMMSPSGSCSPDIGG 673
>IRS1_HUMAN (P35568) Insulin receptor substrate 1 (IRS-1)| Length = 1242 Score = 30.0 bits (66), Expect = 2.9 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = -2 Query: 377 RYPVKVEPDGKIVPLPDQECFPDAGGKICGAPTSLPDSLTM*RHGTDF 234 R+P +V+P+G ++ P C PD G G P+S S GT + Sbjct: 652 RHPQRVDPNGYMMMSPSGGCSPDIG----GGPSSSSSSSNAVPSGTSY 695
>ADRB3_HUMAN (P13945) Beta-3 adrenergic receptor (Beta-3 adrenoceptor) (Beta-3| adrenoreceptor) Length = 408 Score = 29.6 bits (65), Expect = 3.8 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = -2 Query: 416 ASEEMKMLQGHLLRYPVKVEPDG---KIVPLPDQECFPDAGGKICG 288 A+ ++++L+G L R+P + P + P P C P G CG Sbjct: 231 ATRQLRLLRGELGRFPPEESPPAPSRSLAPAPVGTCAPPEGVPACG 276
>FBX27_HUMAN (Q8NI29) F-box only protein 27 (F-box/G-domain protein 5)| Length = 283 Score = 29.3 bits (64), Expect = 4.9 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Frame = -3 Query: 352 MVRSSRCPTKNASPTPVARSAAPRP--RFLIR*RC 254 + RS + P +NA P P+ R A RP R LIR C Sbjct: 85 LARSCQSPARNARPCPLGRFCARRPIGRNLIRNPC 119
>ROR2_MOUSE (Q9Z138) Tyrosine-protein kinase transmembrane receptor ROR2| precursor (EC 2.7.10.1) (Neurotrophic tyrosine kinase, receptor-related 2) (mROR2) Length = 944 Score = 29.3 bits (64), Expect = 4.9 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +1 Query: 289 PQILPPASGKHSWSGSGTILPSGSTFTGYLRRCPCNIFISSDANL 423 PQ++P S HS SGS T TGY+ P N ++ A L Sbjct: 853 PQMVPKPSSHHSGSGS--------TSTGYVTTAPSNTSVADRAAL 889
>IRS1_CERAE (Q28224) Insulin receptor substrate 1 (IRS-1)| Length = 1251 Score = 29.3 bits (64), Expect = 4.9 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -2 Query: 377 RYPVKVEPDGKIVPLPDQECFPDAGG 300 R+P +V+P+G ++ P C PD GG Sbjct: 652 RHPQRVDPNGYMMMSPSGGCSPDIGG 677
>CDON_MOUSE (Q32MD9) Cell adhesion molecule-related/down-regulated by oncogenes| precursor Length = 1250 Score = 28.9 bits (63), Expect = 6.4 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = -2 Query: 374 YPVKVEPDGKIVPLPDQECFPDAGGKICGAPTSLPDSLTM 255 +PVKV P G +P PDA + T +PD+ + Sbjct: 553 FPVKVHPSGVELPAEKNASVPDAPNILSPPQTHMPDTYNL 592
>IF2_SYNY3 (P72689) Translation initiation factor IF-2| Length = 1001 Score = 28.9 bits (63), Expect = 6.4 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 331 PTKNASPTPVARSAAPRPR 275 P+K A PTP A+ AAP PR Sbjct: 163 PSKPAPPTPPAKKAAPAPR 181
>ROR2_HUMAN (Q01974) Tyrosine-protein kinase transmembrane receptor ROR2| precursor (EC 2.7.10.1) (Neurotrophic tyrosine kinase, receptor-related 2) Length = 943 Score = 28.5 bits (62), Expect = 8.4 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +1 Query: 289 PQILPPASGKHSWSGSGTILPSGSTFTGYLRRCPCNIFISSDANL 423 PQ++P S HS SGS T TGY+ P N ++ A L Sbjct: 853 PQMVPKPSSHHSGSGS--------TSTGYVTTAPSNTSMADRAAL 889
>ZAN_MOUSE (O88799) Zonadhesin precursor| Length = 5376 Score = 28.5 bits (62), Expect = 8.4 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 3/25 (12%) Frame = -3 Query: 238 TSLQSPSWLFCS---PVKPL*MSCL 173 T+LQ P+W CS P+KP + C+ Sbjct: 2272 TALQGPAWAHCSSRVPIKPFLLKCM 2296 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,652,647 Number of Sequences: 219361 Number of extensions: 1485145 Number of successful extensions: 4365 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 4174 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4359 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
