ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl17a07 |
|---|---|
| Clone Library Name | barley_pub |
>SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor (EC| 3.2.1.-) (Soluble cell wall protein 11) Length = 542 Score = 30.0 bits (66), Expect = 1.5 Identities = 21/66 (31%), Positives = 33/66 (50%) Frame = +2 Query: 146 NNNIGGDTKTSHLTEEEKKKPCSFPGSSKS*AAVAERPKSMASSFPPNNNQHSCNLAKIY 325 +++ T +S + +E S GSS S AA+ PK++A + P N+ SC A Sbjct: 245 SSSTSSSTSSSTSSTQETAATTS-EGSSSSSAAITSSPKAIA--YSPYNDDGSCKSADAV 301 Query: 326 SSKLAV 343 SS L + Sbjct: 302 SSDLTL 307
>TILS_BUCBP (Q89AX3) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 438 Score = 29.6 bits (65), Expect = 1.9 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +3 Query: 12 RLTVISQNNLRFSFRLLQC*HDIL*PTEYSKTTVHCYKLCKN 137 +L + +NNL F+FR + H + +E K + HC K+C N Sbjct: 30 QLLKLKKNNLNFTFRAIHINHQLHPDSE--KWSDHCKKICIN 69
>CCNB3_MOUSE (Q810T2) G2/mitotic-specific cyclin-B3| Length = 1396 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -3 Query: 136 FLHNL*QCTVVLEYSVGYNISCQHCRSRKLN 44 ++ NL C LEY GY ++ H RKLN Sbjct: 1319 YMRNLSNCVPTLEYFTGYKMAELHILVRKLN 1349
>DRD3_PANTR (Q5IS72) D(3) dopamine receptor| Length = 400 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 5/30 (16%) Frame = +3 Query: 267 WLPPFLQTIINT-----HVTSQKYTAQNWL 341 WLP FL ++NT HV+ + Y+A WL Sbjct: 342 WLPFFLTHVLNTHCQTCHVSPELYSATTWL 371
>DRD3_HUMAN (P35462) D(3) dopamine receptor| Length = 400 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 5/30 (16%) Frame = +3 Query: 267 WLPPFLQTIINT-----HVTSQKYTAQNWL 341 WLP FL ++NT HV+ + Y+A WL Sbjct: 342 WLPFFLTHVLNTHCQTCHVSPELYSATTWL 371
>DRD3_CERAE (P52703) D(3) dopamine receptor| Length = 400 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 5/30 (16%) Frame = +3 Query: 267 WLPPFLQTIINT-----HVTSQKYTAQNWL 341 WLP FL ++NT HV+ + Y+A WL Sbjct: 342 WLPFFLTHVLNTHCQTCHVSPELYSATTWL 371
>LUZP1_HUMAN (Q86V48) Leucine zipper protein 1| Length = 1076 Score = 28.5 bits (62), Expect = 4.2 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 8/53 (15%) Frame = +2 Query: 170 KTSHL-------TEEEKKKPCSF-PGSSKS*AAVAERPKSMASSFPPNNNQHS 304 K SH+ T+E KK F PGSS+S + S+ S +PP +HS Sbjct: 433 KASHMGVSTDSGTQETKKTEDRFVPGSSQSEGKKSREQPSVLSRYPPAAQEHS 485
>DRD2L_FUGRU (P53453) D(2)-like dopamine receptor| Length = 463 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 5/30 (16%) Frame = +3 Query: 267 WLPPFLQTIINTHVT-----SQKYTAQNWL 341 WLP F+ I+NTH T ++ Y A WL Sbjct: 405 WLPFFITHILNTHCTRCKVPAEMYNAFTWL 434
>DRD3_RAT (P19020) D(3) dopamine receptor| Length = 446 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 5/30 (16%) Frame = +3 Query: 267 WLPPFLQTIINT-----HVTSQKYTAQNWL 341 WLP FL ++NT HV+ + Y A WL Sbjct: 388 WLPFFLTHVLNTHCQACHVSPELYRATTWL 417
>DRD3_MOUSE (P30728) D(3) dopamine receptor| Length = 446 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 5/30 (16%) Frame = +3 Query: 267 WLPPFLQTIINT-----HVTSQKYTAQNWL 341 WLP FL ++NT HV+ + Y A WL Sbjct: 388 WLPFFLTHVLNTHCQACHVSPELYRATTWL 417
>YKG6_CAEEL (P46556) Hypothetical protein B0285.6 in chromosome III| Length = 577 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -1 Query: 222 PGNEQGFFFSSSVKWDVFVSPPMLLFLFSSYTI 124 P + G + S W F PPM+ ++FSS+ I Sbjct: 246 PNEDHGISYLS---WMAFAIPPMIFYMFSSWFI 275
>NAD2_CAEEL (P32739) Sodium-dependent high-affinity dicarboxylate transporter 2| (Na(+)/dicarboxylate cotransporter 2) (NaDC-2) (ceNaDC2) Length = 551 Score = 27.7 bits (60), Expect = 7.2 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -1 Query: 186 VKWDVFVSPPMLLFLFSSYTI 124 ++W VF PPM ++L +SY I Sbjct: 241 LQWMVFAIPPMFVYLLASYII 261
>PCYOX_PONPY (Q5R748) Prenylcysteine oxidase precursor (EC 1.8.3.5)| Length = 505 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/51 (23%), Positives = 26/51 (50%) Frame = -2 Query: 344 QQPVLSCIFLRGYMSVDYCLEERRKPWILVSRRRRPNSCWSLGMNKAFFFL 192 Q+ + L+ ++S DY + +KPW+ + P C S+ ++ ++L Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYL 457
>PCYOX_MACFA (Q95KC9) Prenylcysteine oxidase precursor (EC 1.8.3.5)| Length = 505 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/51 (23%), Positives = 26/51 (50%) Frame = -2 Query: 344 QQPVLSCIFLRGYMSVDYCLEERRKPWILVSRRRRPNSCWSLGMNKAFFFL 192 Q+ + L+ ++S DY + +KPW+ + P C S+ ++ ++L Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYL 457
>PCYOX_HUMAN (Q9UHG3) Prenylcysteine oxidase precursor (EC 1.8.3.5) (PCL1)| Length = 505 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/51 (23%), Positives = 26/51 (50%) Frame = -2 Query: 344 QQPVLSCIFLRGYMSVDYCLEERRKPWILVSRRRRPNSCWSLGMNKAFFFL 192 Q+ + L+ ++S DY + +KPW+ + P C S+ ++ ++L Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYL 457
>RBL2_MAGMG (Q8RTI2) Ribulose bisphosphate carboxylase (EC 4.1.1.39) (RuBisCO)| Length = 459 Score = 27.7 bits (60), Expect = 7.2 Identities = 18/56 (32%), Positives = 24/56 (42%) Frame = -1 Query: 258 GLSATAA*LLLEPGNEQGFFFSSSVKWDVFVSPPMLLFLFSSYTICNNVLWFWSIL 91 G + A+ L L GN QG + K + F PP L LF N+ W +L Sbjct: 97 GKAMIASFLTLTVGNNQGMSDVENAKMEDFYVPPEFLKLFDGPAC--NISHMWKVL 150
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Frame = +3 Query: 219 QAPARVRPPSPRDQNP-WLPPFLQTIINTHVTSQKYTAQ 332 Q P RPP P+ P W PP Q I T S+ TAQ Sbjct: 198 QGPPSTRPPPPQRPPPRWPPPSPQKISETRAGSEN-TAQ 235 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,269,630 Number of Sequences: 219361 Number of extensions: 1052124 Number of successful extensions: 3247 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 3183 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3246 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
