ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl17a05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB109215.1| Hordeum vulgare BRI1 gene for putative brassinos... 176 3e-41
2dbj|AB109214.1| Hordeum vulgare subsp. spontaneum BRI1 gene for ... 176 3e-41
3dbj|AB109213.1| Hordeum vulgare BRI1 gene for putative brassinos... 176 3e-41
4dbj|AB088206.1| Hordeum vulgare BRI1 mRNA for putative brassinos... 176 3e-41
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 64 3e-07
6dbj|AP003453.3| Oryza sativa (japonica cultivar-group) genomic D... 64 3e-07
7dbj|AK121760.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 3e-07
8dbj|AK101085.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 3e-07
9dbj|AK073838.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 3e-07
10ref|XM_477648.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.32
11gb|AC133004.4| Oryza sativa (japonica cultivar-group) chromosome... 44 0.32
12dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
13dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
14dbj|AP005462.5| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
15gb|AC137950.16| Mus musculus chromosome 15, clone RP24-356L7, co... 44 0.32
16gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.32
17gb|AC157952.2| Gallus gallus BAC clone CH261-57A7 from chromosom... 44 0.32
18emb|CT009734.9| Mouse DNA sequence from clone RP23-182E3 on chro... 42 1.3
19gb|AC126244.3| Mus musculus BAC clone RP24-319A6 from chromosome... 42 1.3
20gb|AC154334.2| Mus musculus BAC clone RP24-497L7 from chromosome... 42 1.3
21gb|AC163105.5| Mus musculus BAC clone RP23-259A11 from chromosom... 42 1.3
22gb|AC157822.2| Mus musculus BAC clone RP23-392J15 from chromosom... 42 1.3
23gb|AC139184.4| Mus musculus BAC clone RP24-114G18 from 8, comple... 42 1.3
24gb|AC153600.8| Mus musculus 6 BAC RP23-380C10 (Roswell Park Canc... 40 5.0
25gb|AC156250.2| Xenopus tropicalis clone ISB1-258K10, complete se... 40 5.0
26gb|AC124854.2| Homo sapiens chromosome 5 clone RP11-133F8, compl... 40 5.0
27gb|AC107311.8| Homo sapiens 3 BAC RP11-576M8 (Roswell Park Cance... 40 5.0
28gb|AC008813.6| Homo sapiens chromosome 19 clone CTD-2102P23, com... 40 5.0
29emb|BX571707.13| Zebrafish DNA sequence from clone DKEY-93K4 in ... 40 5.0
30gb|U12290.2|FSU12290 Sphingobium chlorophenolicum PcpB (pcpB), P... 40 5.0
31dbj|AK136477.1| Mus musculus adult male colon cDNA, RIKEN full-l... 40 5.0
32gb|AC053544.5| Homo sapiens BAC clone RP11-793B9 from 4, complet... 40 5.0
33gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.0
34emb|BX664626.9| Zebrafish DNA sequence from clone CH211-266O3 in... 40 5.0
35gb|AC073528.26|AC073528 Homo sapiens 12 BAC RP11-8P16 (Roswell P... 40 5.0
36gb|AC010487.7|AC010487 Homo sapiens chromosome 19 clone CTD-2331... 40 5.0
37gb|AC073907.25| Homo sapiens 12 BAC RP11-202G24 (Roswell Park Ca... 40 5.0
38emb|AL845160.8| Mouse DNA sequence from clone RP23-303O15 on chr... 40 5.0
39emb|AL451071.3|CNS07EEZ Human chromosome 14 DNA sequence BAC R-7... 40 5.0
40emb|AL390800.4|CNS06C7R Human chromosome 14 DNA sequence BAC R-2... 40 5.0
41emb|AL935278.7| Mouse DNA sequence from clone RP23-84E1 on chrom... 40 5.0
42gb|AC162442.19| Mus musculus chromosome 1, clone RP24-178O17, co... 40 5.0
43emb|AL606977.28| Mouse DNA sequence from clone RP23-284L6 on chr... 40 5.0
44emb|AL669929.14| Mouse DNA sequence from clone RP23-197J15 on ch... 40 5.0 
>dbj|AB109215.1| Hordeum vulgare BRI1 gene for putative brassinosteroid-insensitive 1,
            complete cds, cultivar:Akashinriki
          Length = 3558

 Score =  176 bits (89), Expect = 3e-41
 Identities = 92/93 (98%)
 Strand = Plus / Minus

                                                                        
Query: 282  tgagaggctgatttctacgggttttttcgcccccaaacccatactggacggacggacgga 341
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 3508 tgagaggctgatttctacgggttttttcgcccccaaacccaaactggacggacggacgga 3449

                                             
Query: 342  cgtgttgctgccggtcaccgccgtctgcgtgtc 374
            |||||||||||||||||||||||||||||||||
Sbjct: 3448 cgtgttgctgccggtcaccgccgtctgcgtgtc 3416



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 232  agcttgcgtgggaacctcagaatggt 257
            ||||||||||||||||||||||||||
Sbjct: 3558 agcttgcgtgggaacctcagaatggt 3533
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>dbj|AB109214.1| Hordeum vulgare subsp. spontaneum BRI1 gene for putative
            brassinosteroid-insensitive 1, complete cds, strain:H602
          Length = 3558

 Score =  176 bits (89), Expect = 3e-41
 Identities = 92/93 (98%)
 Strand = Plus / Minus

                                                                        
Query: 282  tgagaggctgatttctacgggttttttcgcccccaaacccatactggacggacggacgga 341
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 3508 tgagaggctgatttctacgggttttttcgcccccaaacccaaactggacggacggacgga 3449

                                             
Query: 342  cgtgttgctgccggtcaccgccgtctgcgtgtc 374
            |||||||||||||||||||||||||||||||||
Sbjct: 3448 cgtgttgctgccggtcaccgccgtctgcgtgtc 3416



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 232  agcttgcgtgggaacctcagaatggt 257
            ||||||||||||||||||||||||||
Sbjct: 3558 agcttgcgtgggaacctcagaatggt 3533
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>dbj|AB109213.1| Hordeum vulgare BRI1 gene for putative brassinosteroid-insensitive 1,
            complete cds, cultivar:Haruna Nijo
          Length = 3558

 Score =  176 bits (89), Expect = 3e-41
 Identities = 92/93 (98%)
 Strand = Plus / Minus

                                                                        
Query: 282  tgagaggctgatttctacgggttttttcgcccccaaacccatactggacggacggacgga 341
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 3508 tgagaggctgatttctacgggttttttcgcccccaaacccaaactggacggacggacgga 3449

                                             
Query: 342  cgtgttgctgccggtcaccgccgtctgcgtgtc 374
            |||||||||||||||||||||||||||||||||
Sbjct: 3448 cgtgttgctgccggtcaccgccgtctgcgtgtc 3416



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 232  agcttgcgtgggaacctcagaatggt 257
            ||||||||||||||||||||||||||
Sbjct: 3558 agcttgcgtgggaacctcagaatggt 3533
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>dbj|AB088206.1| Hordeum vulgare BRI1 mRNA for putative brassinosteroid-insensitive
            protein 1, complete cds
          Length = 3558

 Score =  176 bits (89), Expect = 3e-41
 Identities = 92/93 (98%)
 Strand = Plus / Minus

                                                                        
Query: 282  tgagaggctgatttctacgggttttttcgcccccaaacccatactggacggacggacgga 341
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 3508 tgagaggctgatttctacgggttttttcgcccccaaacccaaactggacggacggacgga 3449

                                             
Query: 342  cgtgttgctgccggtcaccgccgtctgcgtgtc 374
            |||||||||||||||||||||||||||||||||
Sbjct: 3448 cgtgttgctgccggtcaccgccgtctgcgtgtc 3416



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 232  agcttgcgtgggaacctcagaatggt 257
            ||||||||||||||||||||||||||
Sbjct: 3558 agcttgcgtgggaacctcagaatggt 3533
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                                
Query: 21       catttatatatgtacatacacagctcttactg 52
                ||||||||||||||||||||||||||||||||
Sbjct: 29920903 catttatatatgtacatacacagctcttactg 29920934
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>dbj|AP003453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0480C01
          Length = 151100

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                             
Query: 21    catttatatatgtacatacacagctcttactg 52
             ||||||||||||||||||||||||||||||||
Sbjct: 65461 catttatatatgtacatacacagctcttactg 65492
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>dbj|AK121760.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089P20, full
           insert sequence
          Length = 1001

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 32/32 (100%)
 Strand = Plus / Minus

                                           
Query: 21  catttatatatgtacatacacagctcttactg 52
           ||||||||||||||||||||||||||||||||
Sbjct: 940 catttatatatgtacatacacagctcttactg 909
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>dbj|AK101085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024I12, full
            insert sequence
          Length = 3858

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 32/32 (100%)
 Strand = Plus / Minus

                                            
Query: 21   catttatatatgtacatacacagctcttactg 52
            ||||||||||||||||||||||||||||||||
Sbjct: 3808 catttatatatgtacatacacagctcttactg 3777
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>dbj|AK073838.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069J12, full
            insert sequence
          Length = 3783

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 32/32 (100%)
 Strand = Plus / Minus

                                            
Query: 21   catttatatatgtacatacacagctcttactg 52
            ||||||||||||||||||||||||||||||||
Sbjct: 3765 catttatatatgtacatacacagctcttactg 3734
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>ref|XM_477648.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 339

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 347 tgctgccggtcaccgccgtctg 368
           ||||||||||||||||||||||
Sbjct: 270 tgctgccggtcaccgccgtctg 291
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>gb|AC133004.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0046F10, complete sequence
          Length = 184041

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 190   ggaaaatttcttcttatcgtgt 211
             ||||||||||||||||||||||
Sbjct: 47811 ggaaaatttcttcttatcgtgt 47790
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 190      ggaaaatttcttcttatcgtgt 211
                ||||||||||||||||||||||
Sbjct: 11129799 ggaaaatttcttcttatcgtgt 11129820
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 347      tgctgccggtcaccgccgtctg 368
                ||||||||||||||||||||||
Sbjct: 12463033 tgctgccggtcaccgccgtctg 12463012
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>dbj|AP005462.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0613B07
          Length = 191756

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 347    tgctgccggtcaccgccgtctg 368
              ||||||||||||||||||||||
Sbjct: 107315 tgctgccggtcaccgccgtctg 107294
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>gb|AC137950.16| Mus musculus chromosome 15, clone RP24-356L7, complete sequence
          Length = 182058

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 21    catttatatatgtacatacaca 42
             ||||||||||||||||||||||
Sbjct: 95333 catttatatatgtacatacaca 95354



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 21    catttatatatgtacatacaca 42
             ||||||||||||||||||||||
Sbjct: 95309 catttatatatgtacatacaca 95330
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 190      ggaaaatttcttcttatcgtgt 211
                ||||||||||||||||||||||
Sbjct: 11208988 ggaaaatttcttcttatcgtgt 11209009
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>gb|AC157952.2| Gallus gallus BAC clone CH261-57A7 from chromosome unknown, complete
              sequence
          Length = 216788

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 21     catttatatatgtacatacaca 42
              ||||||||||||||||||||||
Sbjct: 176647 catttatatatgtacatacaca 176626
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>emb|CT009734.9| Mouse DNA sequence from clone RP23-182E3 on chromosome 14, complete
              sequence
          Length = 202398

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 22     atttatatatgtacatacaca 42
              |||||||||||||||||||||
Sbjct: 149277 atttatatatgtacatacaca 149297
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>gb|AC126244.3| Mus musculus BAC clone RP24-319A6 from chromosome 12, complete sequence
          Length = 175549

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    atttatatatgtacatacaca 42
             |||||||||||||||||||||
Sbjct: 89085 atttatatatgtacatacaca 89065
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>gb|AC154334.2| Mus musculus BAC clone RP24-497L7 from chromosome 14, complete sequence
          Length = 127819

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    atttatatatgtacatacaca 42
             |||||||||||||||||||||
Sbjct: 88814 atttatatatgtacatacaca 88794
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>gb|AC163105.5| Mus musculus BAC clone RP23-259A11 from chromosome 14, complete
             sequence
          Length = 227806

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 326   tggacggacggacggacgtgt 346
             |||||||||||||||||||||
Sbjct: 63827 tggacggacggacggacgtgt 63847
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>gb|AC157822.2| Mus musculus BAC clone RP23-392J15 from chromosome 12, complete
             sequence
          Length = 185536

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    atttatatatgtacatacaca 42
             |||||||||||||||||||||
Sbjct: 69713 atttatatatgtacatacaca 69693
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>gb|AC139184.4| Mus musculus BAC clone RP24-114G18 from 8, complete sequence
          Length = 166104

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 22    atttatatatgtacatacaca 42
             |||||||||||||||||||||
Sbjct: 33688 atttatatatgtacatacaca 33708
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>gb|AC153600.8| Mus musculus 6 BAC RP23-380C10 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 194848

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     tttatatatgtacatacaca 42
              ||||||||||||||||||||
Sbjct: 143657 tttatatatgtacatacaca 143676
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>gb|AC156250.2| Xenopus tropicalis clone ISB1-258K10, complete sequence
          Length = 79665

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    atgtacatacacagctctta 49
             ||||||||||||||||||||
Sbjct: 75082 atgtacatacacagctctta 75063
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>gb|AC124854.2| Homo sapiens chromosome 5 clone RP11-133F8, complete sequence
          Length = 149205

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     tttatatatgtacatacaca 42
              ||||||||||||||||||||
Sbjct: 132455 tttatatatgtacatacaca 132436
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>gb|AC107311.8| Homo sapiens 3 BAC RP11-576M8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 192233

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     tttatatatgtacatacaca 42
              ||||||||||||||||||||
Sbjct: 101146 tttatatatgtacatacaca 101165
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>gb|AC008813.6| Homo sapiens chromosome 19 clone CTD-2102P23, complete sequence
          Length = 162914

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    tttatatatgtacatacaca 42
             ||||||||||||||||||||
Sbjct: 11829 tttatatatgtacatacaca 11848
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>emb|BX571707.13| Zebrafish DNA sequence from clone DKEY-93K4 in linkage group 14,
             complete sequence
          Length = 170416

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   actggacggacggacggacg 343
             ||||||||||||||||||||
Sbjct: 37846 actggacggacggacggacg 37865
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>gb|U12290.2|FSU12290 Sphingobium chlorophenolicum PcpB (pcpB), PcpD (pcpD), PCP
            degradation regulatory protein (pcpR), probable
            succinoglycan biosynthesis protein, and probable outer
            membrane salicin receptor genes, complete cds; and
            probable TonB-dependent receptor gene, partial cds
          Length = 8480

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 338  cggacgtgttgctgccggtcaccg 361
            ||||||||||| ||||||||||||
Sbjct: 8260 cggacgtgttggtgccggtcaccg 8283
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>dbj|AK136477.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched
           library, clone:9030614M07 product:unclassifiable, full
           insert sequence
          Length = 2768

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 327 ggacggacggacggacgtgt 346
           ||||||||||||||||||||
Sbjct: 534 ggacggacggacggacgtgt 515
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>gb|AC053544.5| Homo sapiens BAC clone RP11-793B9 from 4, complete sequence
          Length = 187332

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    ttatatatgtacatacacag 43
             ||||||||||||||||||||
Sbjct: 62044 ttatatatgtacatacacag 62063
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 348     gctgccggtcaccgccgtct 367
               ||||||||||||||||||||
Sbjct: 4992072 gctgccggtcaccgccgtct 4992053
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>emb|BX664626.9| Zebrafish DNA sequence from clone CH211-266O3 in linkage group 20,
             complete sequence
          Length = 200968

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   actggacggacggacggacg 343
             ||||||||||||||||||||
Sbjct: 14118 actggacggacggacggacg 14137
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>gb|AC073528.26|AC073528 Homo sapiens 12 BAC RP11-8P16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 167041

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     tatatatgtacatacacagc 44
              ||||||||||||||||||||
Sbjct: 137252 tatatatgtacatacacagc 137271
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>gb|AC010487.7|AC010487 Homo sapiens chromosome 19 clone CTD-2331H12, complete sequence
          Length = 102341

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 23   tttatatatgtacatacaca 42
            ||||||||||||||||||||
Sbjct: 1188 tttatatatgtacatacaca 1169
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>gb|AC073907.25| Homo sapiens 12 BAC RP11-202G24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 135245

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    tatatatgtacatacacagc 44
             ||||||||||||||||||||
Sbjct: 97759 tatatatgtacatacacagc 97740
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>emb|AL845160.8| Mouse DNA sequence from clone RP23-303O15 on chromosome 2, complete
              sequence
          Length = 170074

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     tttatatatgtacatacaca 42
              ||||||||||||||||||||
Sbjct: 115389 tttatatatgtacatacaca 115370
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>emb|AL451071.3|CNS07EEZ Human chromosome 14 DNA sequence BAC R-779M2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 200109

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     tttatatatgtacatacaca 42
              ||||||||||||||||||||
Sbjct: 137047 tttatatatgtacatacaca 137028
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>emb|AL390800.4|CNS06C7R Human chromosome 14 DNA sequence BAC R-254B15 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 169029

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     tttatatatgtacatacaca 42
              ||||||||||||||||||||
Sbjct: 160645 tttatatatgtacatacaca 160664
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>emb|AL935278.7| Mouse DNA sequence from clone RP23-84E1 on chromosome 2, complete
             sequence
          Length = 183353

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    tatatatgtacatacacagc 44
             ||||||||||||||||||||
Sbjct: 40681 tatatatgtacatacacagc 40700
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>gb|AC162442.19| Mus musculus chromosome 1, clone RP24-178O17, complete sequence
          Length = 201383

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   actggacggacggacggacg 343
             ||||||||||||||||||||
Sbjct: 84186 actggacggacggacggacg 84205
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>emb|AL606977.28| Mouse DNA sequence from clone RP23-284L6 on chromosome 4, complete
              sequence
          Length = 199429

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    ggacggacggacggacgtgt 346
              ||||||||||||||||||||
Sbjct: 178946 ggacggacggacggacgtgt 178965
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>emb|AL669929.14| Mouse DNA sequence from clone RP23-197J15 on chromosome X, complete
              sequence
          Length = 204206

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     tttatatatgtacatacaca 42
              ||||||||||||||||||||
Sbjct: 176928 tttatatatgtacatacaca 176947


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,203,650
Number of Sequences: 3902068
Number of extensions: 2203650
Number of successful extensions: 69455
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69221
Number of HSP's gapped (non-prelim): 234
length of query: 374
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 352
effective length of database: 17,147,199,772
effective search space: 6035814319744
effective search space used: 6035814319744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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