ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl16h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF479043.1| Triticum aestivum 40S ribosomal protein mRNA, par... 242 6e-61
2gb|AF117889.1|AF117889 Avena fatua 40S ribosomal protein S3A mRN... 155 1e-34
3ref|XM_464995.1| Oryza sativa (japonica cultivar-group), mRNA 113 4e-22
4ref|XM_506775.1| PREDICTED Oryza sativa (japonica cultivar-group... 113 4e-22
5dbj|AK099131.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 4e-22
6dbj|AK059647.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 4e-22
7gb|AF052503.1|AF052503 Oryza sativa S-phase-specific ribosomal p... 113 4e-22
8gb|AY109383.1| Zea mays CL7224_1 mRNA sequence 107 2e-20
9gb|BT016390.1| Zea mays clone Contig223 mRNA sequence 105 9e-20
10gb|DQ159867.1| Cymbidium faberi clone CDD-470 40s ribosomal prot... 105 9e-20
11gb|BT019079.1| Zea mays clone Contig661.F mRNA sequence 98 2e-17
12dbj|D26060.1|RICT151 Oryza sativa mRNA for cyc07, complete cds 94 4e-16
13dbj|AK104699.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 4e-16
14dbj|AK104243.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 4e-16
15dbj|AK069251.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 4e-16
16ref|NM_119633.2| Arabidopsis thaliana structural constituent of ... 86 9e-14
17gb|AY062500.1| Arabidopsis thaliana Putative S-phase-specific ri... 86 9e-14
18emb|BX826401.1|CNS0A38P Arabidopsis thaliana Full-length cDNA Co... 86 9e-14
19emb|AJ001342.1|ATCYC07 Arabidopsis thaliana mRNA for S-phase-spe... 86 9e-14
20gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 80 5e-12
21gb|AC146581.1| Oryza sativa (japonica cultivar-group) Nipponbare... 80 5e-12
22gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare str... 80 5e-12
23dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 80 5e-12
24gb|AF542188.1| Triticum aestivum cyc07 mRNA, complete cds 78 2e-11
25emb|BX828268.1|CNS0A2YE Arabidopsis thaliana Full-length cDNA Co... 78 2e-11
26emb|Z25769.1|BRSPSG B.rapa mRNA for S phase specific gene 72 1e-09
27gb|L23553.1|BRRSPSK Brassica rapa S-phase-specific (BIS289) mRNA... 72 1e-09
28gb|DQ241862.1| Solanum tuberosum clone 027B03 40S ribosomal prot... 70 5e-09
29emb|AL161586.2|ATCHRIV82 Arabidopsis thaliana DNA chromosome 4, ... 68 2e-08
30emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, ... 68 2e-08
31emb|AL023094.2|ATT4L20 Arabidopsis thaliana DNA chromosome 4, BA... 68 2e-08
32emb|Z18417.1|ATTS0792 Arabidopsis thaliana transcribed sequence;... 66 8e-08
33dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
34dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
35dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
36gb|DQ268856.1| Solanum tuberosum clone 174A02 cyc07-like protein... 62 1e-06
37gb|DQ268849.1| Solanum tuberosum clone 155F06 cyc07-like protein... 62 1e-06
38gb|DQ252485.1| Solanum tuberosum clone 048H05 cyc07-like mRNA, c... 62 1e-06
39dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
40dbj|AK071037.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
41gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 58 2e-05
42emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa... 58 2e-05
43gb|DQ164221.1| Nicotiana tabacum cyc07 mRNA, complete cds 48 0.019
44dbj|AB029635.1| Daucus carota mRNA for cyc07, complete cds 48 0.019
45gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold 46 0.074
46gb|AC090771.4| Homo sapiens chromosome 18, clone RP11-795H16, co... 46 0.074
47ref|XM_944491.1| PREDICTED: Homo sapiens similar to 40S ribosoma... 46 0.074
48ref|XM_944488.1| PREDICTED: Homo sapiens similar to 40S ribosoma... 46 0.074
49ref|XM_944486.1| PREDICTED: Homo sapiens similar to 40S ribosoma... 46 0.074
50ref|XM_940167.1| PREDICTED: Homo sapiens similar to 40S ribosoma... 46 0.074
51ref|XM_944482.1| PREDICTED: Homo sapiens similar to 40S ribosoma... 46 0.074
52ref|XM_931855.1| PREDICTED: Homo sapiens similar to 40S ribosoma... 46 0.074
53ref|XM_931846.1| PREDICTED: Homo sapiens similar to 40S ribosoma... 46 0.074
54ref|XM_931841.1| PREDICTED: Homo sapiens similar to 40S ribosoma... 46 0.074
55ref|XM_927103.1| PREDICTED: Homo sapiens similar to 40S ribosoma... 46 0.074
56ref|XM_375543.3| PREDICTED: Homo sapiens similar to 40S ribosoma... 46 0.074
57gb|AC090621.10| Homo sapiens chromosome 18, clone RP11-396N11, c... 46 0.074
58gb|AC146532.3| Otolemur garnettii clone CH256-151F13, complete s... 46 0.074
59gb|DQ268842.1| Solanum tuberosum clone 135C12 40S ribosomal prot... 44 0.29
60ref|NM_111356.3| Arabidopsis thaliana structural constituent of ... 42 1.2
61gb|BT022161.1| Drosophila melanogaster IP01358 full insert cDNA 42 1.2
62ref|NM_206456.1| Drosophila melanogaster rotund CG32466-RB, tran... 42 1.2
63ref|NM_141458.2| Drosophila melanogaster rotund CG32466-RA, tran... 42 1.2
64gb|AY081585.1| Arabidopsis thaliana putative 40S ribosomal prote... 42 1.2
65gb|AF395905.1|AF395905 Drosophila melanogaster rotund mRNA, comp... 42 1.2
66gb|AF395904.1|AF395904 Drosophila melanogaster roughened eye mRN... 42 1.2
67gb|AY062796.1| Arabidopsis thaliana putative 40S ribosomal prote... 42 1.2
68dbj|AK220818.1| Arabidopsis thaliana mRNA for 40S ribosomal prot... 42 1.2
69gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 42 1.2
70gb|AC160763.3| Mus musculus BAC clone RP23-238A4 from chromosome... 42 1.2
71emb|BX822077.1|CNS0A7LX Arabidopsis thaliana Full-length cDNA Co... 42 1.2
72emb|BX824488.1|CNS0A5KP Arabidopsis thaliana Full-length cDNA Co... 42 1.2
73gb|AC008029.3|AC008029 Drosophila melanogaster, chromosome 3R, r... 42 1.2
74gb|AC154561.2| Mus musculus BAC clone RP23-400M17 from chromosom... 42 1.2
75gb|AY085787.1| Arabidopsis thaliana clone 18185 mRNA, complete s... 42 1.2
76gb|AY849388.1| Vitis vinifera cultivar Riesling cyc07 mRNA, part... 42 1.2
77ref|NM_209036.1| Eremothecium gossypii ACR281Cp (ACR281C), mRNA 42 1.2
78gb|AE003672.4| Drosophila melanogaster chromosome 3R, section 12... 42 1.2
79gb|L31645.1|HNNSPSP Helianthus annuus ribosomal protein S3a mRNA... 42 1.2
80gb|DQ214673.1| Taeniopygia guttata clone 0061P0008B04 ribosomal ... 40 4.6
81gb|DQ214672.1| Taeniopygia guttata clone 0058P0017B06 ribosomal ... 40 4.6
82gb|DQ214671.1| Taeniopygia guttata clone 0058P0045E12 ribosomal ... 40 4.6
83gb|DQ214670.1| Taeniopygia guttata clone 0058P0030H07 ribosomal ... 40 4.6
84gb|DQ214669.1| Taeniopygia guttata clone 0061P0016E10 ribosomal ... 40 4.6
85gb|DQ214668.1| Taeniopygia guttata clone 0063P0025A12 ribosomal ... 40 4.6
86gb|AC148997.1| Mus musculus BAC clone RP23-338B6 from chromosome... 40 4.6
87gb|AC135639.4| Mus musculus BAC clone RP23-330O16 from chromosom... 40 4.6
88emb|AL356127.8| Human DNA sequence from clone RP11-368P1 on chro... 40 4.6
89emb|AL008712.1|HS84F12 Human DNA sequence from clone RP1-84F12 o... 40 4.6
90gb|AC135960.14| Pan troglodytes clone rp43-55o12, complete sequence 40 4.6
91gb|AF093109.1| Tortula ruralis ribosomal protein S3 (rps3) mRNA,... 40 4.6
92gb|AC140899.3| Homo sapiens chromosome 16 clone RP11-792K9, comp... 40 4.6
93gb|AC009465.7|AC009465 Arabidopsis thaliana chromosome 3 BAC T9J... 40 4.6
94ref|XM_231763.3| PREDICTED: Rattus norvegicus nuclear factor, er... 40 4.6
95gb|AC000055.1|HSAC000055 Human PAC clone DJ073F11 from Xq23, com... 40 4.6 
>gb|AF479043.1| Triticum aestivum 40S ribosomal protein mRNA, partial cds
          Length = 342

 Score =  242 bits (122), Expect = 6e-61
 Identities = 151/160 (94%), Gaps = 3/160 (1%)
 Strand = Plus / Minus

                                                                       
Query: 189 ctactcagcagcagcaacctcctccgcaccaggaatgacctcatctccatcag---gcct 245
           |||||||||||||||||||||||||||||||||||||||||| || |||||||   ||||
Sbjct: 342 ctactcagcagcagcaacctcctccgcaccaggaatgacctcgtccccatcagcaggcct 283

                                                                       
Query: 246 gtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagctttcccag 305
           ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 282 gtcaagcttcacaccaacatcctccttgtagtcaccgtgaacctccatgagcttccccag 223

                                                   
Query: 306 gtcaaacttcggggccttcaggatcttcaccttgcggacg 345
           ||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 222 gtcgaacttgggggccttcaggatcttcaccttgcggacg 183
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>gb|AF117889.1|AF117889 Avena fatua 40S ribosomal protein S3A mRNA, partial cds
          Length = 382

 Score =  155 bits (78), Expect = 1e-34
 Identities = 140/160 (87%), Gaps = 3/160 (1%)
 Strand = Plus / Minus

                                                                       
Query: 188 tctactcagcagcagcaacctcctccgcaccaggaatgacctcatctccatcag---gcc 244
           ||||||| ||||||||||||||||| ||||| || |||||||||||||||||||   |||
Sbjct: 257 tctactcggcagcagcaacctcctcagcaccggggatgacctcatctccatcagcaggcc 198

                                                                       
Query: 245 tgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagctttccca 304
           |||| | |||   ||||||||| |||||||||||||| ||||||||||||||||| ||||
Sbjct: 197 tgtccaacttggtaccaacatcttccttgtagtcaccatgcacctccatgagcttcccca 138

                                                   
Query: 305 ggtcaaacttcggggccttcaggatcttcaccttgcggac 344
           | || ||||| || ||||||| ||||||||||||||||||
Sbjct: 137 gatcgaacttgggtgccttcaagatcttcaccttgcggac 98



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 35/36 (97%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                               
Query: 93  atcagccatcaaaactgactaca-aagttcacgaca 127
           ||||||||||||||||||||||| ||||||||||||
Sbjct: 365 atcagccatcaaaactgactacagaagttcacgaca 330
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>ref|XM_464995.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1063

 Score =  113 bits (57), Expect = 4e-22
 Identities = 93/105 (88%)
 Strand = Plus / Minus

                                                                       
Query: 239 caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagct 298
           |||||||||| ||||||| ||| ||||| ||||||||||||||||| |||||||| | ||
Sbjct: 774 caggcctgtccagcttcataccgacatcttccttgtagtcaccgtgtacctccatcaact 715

                                                        
Query: 299 ttcccaggtcaaacttcggggccttcaggatcttcaccttgcgga 343
           | || || ||||||||||| ||||||| |||||||||||||||||
Sbjct: 714 tcccaagatcaaacttcggtgccttcaagatcttcaccttgcgga 670
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>ref|XM_506775.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1115_D03.49
           mRNA
          Length = 1171

 Score =  113 bits (57), Expect = 4e-22
 Identities = 93/105 (88%)
 Strand = Plus / Minus

                                                                       
Query: 239 caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagct 298
           |||||||||| ||||||| ||| ||||| ||||||||||||||||| |||||||| | ||
Sbjct: 810 caggcctgtccagcttcataccgacatcttccttgtagtcaccgtgtacctccatcaact 751

                                                        
Query: 299 ttcccaggtcaaacttcggggccttcaggatcttcaccttgcgga 343
           | || || ||||||||||| ||||||| |||||||||||||||||
Sbjct: 750 tcccaagatcaaacttcggtgccttcaagatcttcaccttgcgga 706
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>dbj|AK099131.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048M05, full
           insert sequence
          Length = 1063

 Score =  113 bits (57), Expect = 4e-22
 Identities = 93/105 (88%)
 Strand = Plus / Minus

                                                                       
Query: 239 caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagct 298
           |||||||||| ||||||| ||| ||||| ||||||||||||||||| |||||||| | ||
Sbjct: 774 caggcctgtccagcttcataccgacatcttccttgtagtcaccgtgtacctccatcaact 715

                                                        
Query: 299 ttcccaggtcaaacttcggggccttcaggatcttcaccttgcgga 343
           | || || ||||||||||| ||||||| |||||||||||||||||
Sbjct: 714 tcccaagatcaaacttcggtgccttcaagatcttcaccttgcgga 670
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>dbj|AK059647.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-C03, full
           insert sequence
          Length = 1171

 Score =  113 bits (57), Expect = 4e-22
 Identities = 93/105 (88%)
 Strand = Plus / Minus

                                                                       
Query: 239 caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagct 298
           |||||||||| ||||||| ||| ||||| ||||||||||||||||| |||||||| | ||
Sbjct: 810 caggcctgtccagcttcataccgacatcttccttgtagtcaccgtgtacctccatcaact 751

                                                        
Query: 299 ttcccaggtcaaacttcggggccttcaggatcttcaccttgcgga 343
           | || || ||||||||||| ||||||| |||||||||||||||||
Sbjct: 750 tcccaagatcaaacttcggtgccttcaagatcttcaccttgcgga 706
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>gb|AF052503.1|AF052503 Oryza sativa S-phase-specific ribosomal protein (RSPSP94) mRNA,
           complete cds
          Length = 1027

 Score =  113 bits (57), Expect = 4e-22
 Identities = 93/105 (88%)
 Strand = Plus / Minus

                                                                       
Query: 239 caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagct 298
           |||||||||| ||||||| ||| ||||| ||||||||||||||||| |||||||| | ||
Sbjct: 771 caggcctgtccagcttcataccgacatcttccttgtagtcaccgtgtacctccatcaact 712

                                                        
Query: 299 ttcccaggtcaaacttcggggccttcaggatcttcaccttgcgga 343
           | || || ||||||||||| ||||||| |||||||||||||||||
Sbjct: 711 tcccaagatcaaacttcggtgccttcaagatcttcaccttgcgga 667
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>gb|AY109383.1| Zea mays CL7224_1 mRNA sequence
          Length = 1236

 Score =  107 bits (54), Expect = 2e-20
 Identities = 92/105 (87%)
 Strand = Plus / Plus

                                                                       
Query: 239 caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagct 298
           ||||||| ||||||||||||||||||||||| |||||||| || || |||||||||||||
Sbjct: 383 caggcctctcaagcttcacaccaacatcctctttgtagtcgccatgaacctccatgagct 442

                                                        
Query: 299 ttcccaggtcaaacttcggggccttcaggatcttcaccttgcgga 343
           | || || || ||||| ||| |||| || ||||||||||||||||
Sbjct: 443 tcccaagatcgaacttggggnccttgagtatcttcaccttgcgga 487
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>gb|BT016390.1| Zea mays clone Contig223 mRNA sequence
          Length = 1104

 Score =  105 bits (53), Expect = 9e-20
 Identities = 92/105 (87%)
 Strand = Plus / Minus

                                                                       
Query: 239 caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagct 298
           ||||||| ||||||||||||||||||||||| |||||||| || || ||||||||||| |
Sbjct: 812 caggcctctcaagcttcacaccaacatcctctttgtagtcgccatgaacctccatgagtt 753

                                                        
Query: 299 ttcccaggtcaaacttcggggccttcaggatcttcaccttgcgga 343
           | || || || ||||| |||||||| || ||||||||||||||||
Sbjct: 752 tcccaagatcgaacttgggggccttgagtatcttcaccttgcgga 708
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>gb|DQ159867.1| Cymbidium faberi clone CDD-470 40s ribosomal protein S3 mRNA,
           partial cds
          Length = 462

 Score =  105 bits (53), Expect = 9e-20
 Identities = 92/105 (87%)
 Strand = Plus / Minus

                                                                       
Query: 239 caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagct 298
           |||||||||||||||||||||||| ||| |||||||| || || || ||||||||||| |
Sbjct: 169 caggcctgtcaagcttcacaccaaaatcttccttgtaatctccatgaacctccatgagtt 110

                                                        
Query: 299 ttcccaggtcaaacttcggggccttcaggatcttcaccttgcgga 343
           |||| || |||||||| || ||||| |||||||| ||||||||||
Sbjct: 109 ttccaagatcaaactttggagccttgaggatcttaaccttgcgga 65
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>gb|BT019079.1| Zea mays clone Contig661.F mRNA sequence
          Length = 1229

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 91/105 (86%)
 Strand = Plus / Plus

                                                                       
Query: 239 caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagct 298
           ||||||| ||||||||||||||||| ||||| |||||||| || || |||||||| | ||
Sbjct: 281 caggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaact 340

                                                        
Query: 299 ttcccaggtcaaacttcggggccttcaggatcttcaccttgcgga 343
           | || || |||||||| |||||||| || ||||||||||||||||
Sbjct: 341 tcccgagatcaaacttgggggccttgagtatcttcaccttgcgga 385
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>dbj|D26060.1|RICT151 Oryza sativa mRNA for cyc07, complete cds
          Length = 1065

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                       
Query: 274 tagtcaccgtgcacctccatgagctttcccaggtcaaacttcggggccttcaggatcttc 333
           |||||||| ||||||||||||||||| ||||||||||| ||||||||||| || ||||||
Sbjct: 799 tagtcaccatgcacctccatgagcttccccaggtcaaatttcggggcctttagaatcttc 740

                      
Query: 334 accttgcggac 344
           || ||||||||
Sbjct: 739 actttgcggac 729
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>dbj|AK104699.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C03, full
           insert sequence
          Length = 942

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                       
Query: 274 tagtcaccgtgcacctccatgagctttcccaggtcaaacttcggggccttcaggatcttc 333
           |||||||| ||||||||||||||||| ||||||||||| ||||||||||| || ||||||
Sbjct: 685 tagtcaccatgcacctccatgagcttccccaggtcaaatttcggggcctttagaatcttc 626

                      
Query: 334 accttgcggac 344
           || ||||||||
Sbjct: 625 actttgcggac 615
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>dbj|AK104243.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D02, full
           insert sequence
          Length = 1032

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                       
Query: 274 tagtcaccgtgcacctccatgagctttcccaggtcaaacttcggggccttcaggatcttc 333
           |||||||| ||||||||||||||||| ||||||||||| ||||||||||| || ||||||
Sbjct: 775 tagtcaccatgcacctccatgagcttccccaggtcaaatttcggggcctttagaatcttc 716

                      
Query: 334 accttgcggac 344
           || ||||||||
Sbjct: 715 actttgcggac 705
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>dbj|AK069251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013H23, full
           insert sequence
          Length = 1097

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                       
Query: 274 tagtcaccgtgcacctccatgagctttcccaggtcaaacttcggggccttcaggatcttc 333
           |||||||| ||||||||||||||||| ||||||||||| ||||||||||| || ||||||
Sbjct: 776 tagtcaccatgcacctccatgagcttccccaggtcaaatttcggggcctttagaatcttc 717

                      
Query: 334 accttgcggac 344
           || ||||||||
Sbjct: 716 actttgcggac 706
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>ref|NM_119633.2| Arabidopsis thaliana structural constituent of ribosome AT4G34670
           mRNA, complete cds
          Length = 1093

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 86/98 (87%), Gaps = 3/98 (3%)
 Strand = Plus / Minus

                                                                       
Query: 241 ggcctgtcaagcttcacaccaacatcctc--ct-tgtagtcaccgtgcacctccatgagc 297
           |||||||| | ||||||||||||||||||  || |||| || || |||||||||||||||
Sbjct: 818 ggcctgtctaccttcacaccaacatcctctgctgtgtaatctccatgcacctccatgagc 759

                                                 
Query: 298 tttcccaggtcaaacttcggggccttcaggatcttcac 335
           ||||| ||||||||||| || ||||| |||||||||||
Sbjct: 758 tttccaaggtcaaacttgggagcctttaggatcttcac 721
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>gb|AY062500.1| Arabidopsis thaliana Putative S-phase-specific ribosomal protein
           (At4g34670; T4L20.250) mRNA, complete cds
          Length = 1094

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 86/98 (87%), Gaps = 3/98 (3%)
 Strand = Plus / Minus

                                                                       
Query: 241 ggcctgtcaagcttcacaccaacatcctc--ct-tgtagtcaccgtgcacctccatgagc 297
           |||||||| | ||||||||||||||||||  || |||| || || |||||||||||||||
Sbjct: 818 ggcctgtctaccttcacaccaacatcctctgctgtgtaatctccatgcacctccatgagc 759

                                                 
Query: 298 tttcccaggtcaaacttcggggccttcaggatcttcac 335
           ||||| ||||||||||| || ||||| |||||||||||
Sbjct: 758 tttccaaggtcaaacttgggagcctttaggatcttcac 721
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>emb|BX826401.1|CNS0A38P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB21ZE07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 836

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 86/98 (87%), Gaps = 3/98 (3%)
 Strand = Plus / Minus

                                                                       
Query: 241 ggcctgtcaagcttcacaccaacatcctc--ct-tgtagtcaccgtgcacctccatgagc 297
           |||||||| | ||||||||||||||||||  || |||| || || |||||||||||||||
Sbjct: 647 ggcctgtctaccttcacaccaacatcctctgctgtgtaatctccatgcacctccatgagc 588

                                                 
Query: 298 tttcccaggtcaaacttcggggccttcaggatcttcac 335
           ||||| ||||||||||| || ||||| |||||||||||
Sbjct: 587 tttccaaggtcaaacttgggagcctttaggatcttcac 550
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>emb|AJ001342.1|ATCYC07 Arabidopsis thaliana mRNA for S-phase-specific ribosomal protein
          Length = 906

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 86/98 (87%), Gaps = 3/98 (3%)
 Strand = Plus / Minus

                                                                       
Query: 241 ggcctgtcaagcttcacaccaacatcctc--ct-tgtagtcaccgtgcacctccatgagc 297
           |||||||| | ||||||||||||||||||  || |||| || || |||||||||||||||
Sbjct: 740 ggcctgtctaccttcacaccaacatcctctgctgtgtaatctccatgcacctccatgagc 681

                                                 
Query: 298 tttcccaggtcaaacttcggggccttcaggatcttcac 335
           ||||| ||||||||||| || ||||| |||||||||||
Sbjct: 680 tttccaaggtcaaacttgggagcctttaggatcttcac 643
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                           
Query: 285     cacctccatgagctttcccaggtcaaacttcggggccttcaggatcttcaccttgcggac 344
               ||||||||||||||| ||||||||||| ||||||||||| || |||||||| ||||||||
Sbjct: 5245063 cacctccatgagcttccccaggtcaaatttcggggcctttagaatcttcactttgcggac 5245004
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>gb|AC146581.1| Oryza sativa (japonica cultivar-group) Nipponbare strain chromosome 3
             clone OSJNBa0021H20, complete sequence
          Length = 133079

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                         
Query: 285   cacctccatgagctttcccaggtcaaacttcggggccttcaggatcttcaccttgcggac 344
             ||||||||||||||| ||||||||||| ||||||||||| || |||||||| ||||||||
Sbjct: 68465 cacctccatgagcttccccaggtcaaatttcggggcctttagaatcttcactttgcggac 68406
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>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0091J11, from chromosome 3, complete sequence
          Length = 181163

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                         
Query: 285   cacctccatgagctttcccaggtcaaacttcggggccttcaggatcttcaccttgcggac 344
             ||||||||||||||| ||||||||||| ||||||||||| || |||||||| ||||||||
Sbjct: 11455 cacctccatgagcttccccaggtcaaatttcggggcctttagaatcttcactttgcggac 11514
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                           
Query: 285     cacctccatgagctttcccaggtcaaacttcggggccttcaggatcttcaccttgcggac 344
               ||||||||||||||| ||||||||||| ||||||||||| || |||||||| ||||||||
Sbjct: 5244278 cacctccatgagcttccccaggtcaaatttcggggcctttagaatcttcactttgcggac 5244219
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>gb|AF542188.1| Triticum aestivum cyc07 mRNA, complete cds
          Length = 820

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 98/112 (87%), Gaps = 5/112 (4%)
 Strand = Plus / Minus

                                                                       
Query: 239 caggcctgtcaagcttca-caccaacatcctcc-ttgtagtcaccgtgcacctccatga- 295
           ||||||||||||| || | |||||||||||||| |||||||| ||||| ||||| |||| 
Sbjct: 810 caggcctgtcaaggtttaacaccaacatcctccnttgtagtccccgtgaacctcnatgaa 751

                                                               
Query: 296 gctttcccaggtc-aaacttcggggccttcagg-atcttcaccttgcggacg 345
           |||| |||||||  |||||| |||||||||||| |||||||||||||| |||
Sbjct: 750 gcttccccaggtngaaacttgggggccttcaggaatcttcaccttgcgnacg 699
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>emb|BX828268.1|CNS0A2YE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH6ZD12 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1008

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 85/98 (86%), Gaps = 3/98 (3%)
 Strand = Plus / Minus

                                                                       
Query: 241 ggcctgtcaagcttcacaccaacatcctc--ct-tgtagtcaccgtgcacctccatgagc 297
           |||||||| | ||||||||||||||||||  || | || || || |||||||||||||||
Sbjct: 803 ggcctgtctaccttcacaccaacatcctctgctgtctaatctccatgcacctccatgagc 744

                                                 
Query: 298 tttcccaggtcaaacttcggggccttcaggatcttcac 335
           ||||| ||||||||||| || ||||| |||||||||||
Sbjct: 743 tttccaaggtcaaacttgggagcctttaggatcttcac 706
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>emb|Z25769.1|BRSPSG B.rapa mRNA for S phase specific gene
          Length = 1050

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 82/95 (86%), Gaps = 3/95 (3%)
 Strand = Plus / Minus

                                                                       
Query: 241 ggcctgtcaagcttcacaccaacatcctc--ct-tgtagtcaccgtgcacctccatgagc 297
           |||||||||| ||||||||||||||||||  || ||||||| ||||| |||||||| |||
Sbjct: 848 ggcctgtcaaccttcacaccaacatcctctgctgtgtagtctccgtgaacctccataagc 789

                                              
Query: 298 tttcccaggtcaaacttcggggccttcaggatctt 332
           ||||  ||||| ||||| || ||||| ||||||||
Sbjct: 788 tttctaaggtcgaacttgggagccttgaggatctt 754
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>gb|L23553.1|BRRSPSK Brassica rapa S-phase-specific (BIS289) mRNA, complete cds
          Length = 1050

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 82/95 (86%), Gaps = 3/95 (3%)
 Strand = Plus / Minus

                                                                       
Query: 241 ggcctgtcaagcttcacaccaacatcctc--ct-tgtagtcaccgtgcacctccatgagc 297
           |||||||||| ||||||||||||||||||  || ||||||| ||||| |||||||| |||
Sbjct: 848 ggcctgtcaaccttcacaccaacatcctctgctgtgtagtctccgtgaacctccataagc 789

                                              
Query: 298 tttcccaggtcaaacttcggggccttcaggatctt 332
           ||||  ||||| ||||| || ||||| ||||||||
Sbjct: 788 tttctaaggtcgaacttgggagccttgaggatctt 754
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>gb|DQ241862.1| Solanum tuberosum clone 027B03 40S ribosomal protein S3a-like mRNA,
           complete cds
          Length = 1118

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                       
Query: 252 cttcacaccaacatcctccttgtagtcaccgtgcacctccatgagctttcccaggtcaaa 311
           ||||||||||||||| ||    |||||||| || |||||||| ||||| || ||||||||
Sbjct: 812 cttcacaccaacatcttctgaatagtcaccatgaacctccatcagcttgcctaggtcaaa 753

                                      
Query: 312 cttcggggccttcaggatcttcacctt 338
            || ||||||||||||||||| |||||
Sbjct: 752 tttaggggccttcaggatcttgacctt 726
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>emb|AL161586.2|ATCHRIV82 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 82
          Length = 195165

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 286  acctccatgagctttcccaggtcaaacttcggggccttcaggatcttcac 335
            ||||||||||||||||| ||||||||||| || ||||| |||||||||||
Sbjct: 4807 acctccatgagctttccaaggtcaaacttgggagcctttaggatcttcac 4758



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 241  ggcctgtcaagcttcacaccaacatcctc 269
            |||||||| | ||||||||||||||||||
Sbjct: 4951 ggcctgtctaccttcacaccaacatcctc 4923
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>emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 81
          Length = 195921

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                                
Query: 286    acctccatgagctttcccaggtcaaacttcggggccttcaggatcttcac 335
              ||||||||||||||||| ||||||||||| || ||||| |||||||||||
Sbjct: 195728 acctccatgagctttccaaggtcaaacttgggagcctttaggatcttcac 195679



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 241    ggcctgtcaagcttcacaccaacatcctc 269
              |||||||| | ||||||||||||||||||
Sbjct: 195872 ggcctgtctaccttcacaccaacatcctc 195844
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>emb|AL023094.2|ATT4L20 Arabidopsis thaliana DNA chromosome 4, BAC clone T4L20 (ESSA project)
          Length = 125502

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                               
Query: 286   acctccatgagctttcccaggtcaaacttcggggccttcaggatcttcac 335
             ||||||||||||||||| ||||||||||| || ||||| |||||||||||
Sbjct: 86039 acctccatgagctttccaaggtcaaacttgggagcctttaggatcttcac 85990



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 241   ggcctgtcaagcttcacaccaacatcctc 269
             |||||||| | ||||||||||||||||||
Sbjct: 86183 ggcctgtctaccttcacaccaacatcctc 86155
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>emb|Z18417.1|ATTS0792 Arabidopsis thaliana transcribed sequence; clone GBGa463, 5' end;
           similar to Cyc07 protein, S-phase specific - Madagascar
          Length = 187

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 283 tgcacctccatgagctttcccaggtcaaacttcggggccttcaggatcttcac 335
           |||||||||||||||||||| ||||||||||| ||  |||| |||||||||||
Sbjct: 158 tgcacctccatgagctttccaaggtcaaacttgggatcctttaggatcttcac 106
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                           
Query: 285      cacctccatgagctttcccaggtcaaacttcggggccttcaggatcttcaccttgcgga 343
                ||||||||| | ||| || || ||||||||||| ||||||| |||||||||||||||||
Sbjct: 10823053 cacctccatcaacttcccaagatcaaacttcggtgccttcaagatcttcaccttgcgga 10823111



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                   
Query: 239      caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacct 289
                |||||||||| ||||||| ||| ||||| ||||||||||||||||| ||||
Sbjct: 10822102 caggcctgtccagcttcataccgacatcttccttgtagtcaccgtgtacct 10822152
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>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1756_H07
          Length = 217205

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                        
Query: 285   cacctccatgagctttcccaggtcaaacttcggggccttcaggatcttcaccttgcgga 343
             ||||||||| | ||| || || ||||||||||| ||||||| |||||||||||||||||
Sbjct: 29252 cacctccatcaacttcccaagatcaaacttcggtgccttcaagatcttcaccttgcgga 29310



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                
Query: 239   caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacct 289
             |||||||||| ||||||| ||| ||||| ||||||||||||||||| ||||
Sbjct: 28301 caggcctgtccagcttcataccgacatcttccttgtagtcaccgtgtacct 28351
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>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1115_D03
          Length = 169378

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                         
Query: 285    cacctccatgagctttcccaggtcaaacttcggggccttcaggatcttcaccttgcgga 343
              ||||||||| | ||| || || ||||||||||| ||||||| |||||||||||||||||
Sbjct: 162534 cacctccatcaacttcccaagatcaaacttcggtgccttcaagatcttcaccttgcgga 162592



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                 
Query: 239    caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacct 289
              |||||||||| ||||||| ||| ||||| ||||||||||||||||| ||||
Sbjct: 161583 caggcctgtccagcttcataccgacatcttccttgtagtcaccgtgtacct 161633
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>gb|DQ268856.1| Solanum tuberosum clone 174A02 cyc07-like protein mRNA, complete
           cds
          Length = 1045

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                       
Query: 252 cttcacaccaacatcctccttgtagtcaccgtgcacctccatgagctttcccaggtcaaa 311
           ||||||||||||||| ||    |||||||| || |||||||| ||||| || ||||||||
Sbjct: 799 cttcacaccaacatcttctgaatagtcaccatgaacctccatcagcttgccaaggtcaaa 740

                                      
Query: 312 cttcggggccttcaggatcttcacctt 338
            || |||||||| |||||||| |||||
Sbjct: 739 tttaggggccttgaggatcttgacctt 713
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>gb|DQ268849.1| Solanum tuberosum clone 155F06 cyc07-like protein mRNA, complete
           cds
          Length = 1038

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                       
Query: 252 cttcacaccaacatcctccttgtagtcaccgtgcacctccatgagctttcccaggtcaaa 311
           ||||||||||||||| ||    |||||||| || |||||||| ||||| || ||||||||
Sbjct: 783 cttcacaccaacatcttctgaatagtcaccatgaacctccatcagcttgccaaggtcaaa 724

                                      
Query: 312 cttcggggccttcaggatcttcacctt 338
            || |||||||| |||||||| |||||
Sbjct: 723 tttaggggccttgaggatcttgacctt 697
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>gb|DQ252485.1| Solanum tuberosum clone 048H05 cyc07-like mRNA, complete cds
          Length = 998

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                       
Query: 252 cttcacaccaacatcctccttgtagtcaccgtgcacctccatgagctttcccaggtcaaa 311
           ||||||||||||||| ||    |||||||| || |||||||| ||||| || ||||||||
Sbjct: 759 cttcacaccaacatcttctgaatagtcaccatgaacctccatcagcttgccaaggtcaaa 700

                                      
Query: 312 cttcggggccttcaggatcttcacctt 338
            || |||||||| |||||||| |||||
Sbjct: 699 tttaggggccttgaggatcttgacctt 673
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                         
Query: 285      cacctccatgagctttcccaggtcaaacttcggggccttcaggatcttcaccttgcg 341
                ||||||||| ||||| ||||||||||| || |||||||| |||||||| || |||||
Sbjct: 12315297 cacctccataagcttgcccaggtcaaattttggggccttgaggatcttgactttgcg 12315353
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>dbj|AK071037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079A13, full
           insert sequence
          Length = 1118

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 96/117 (82%), Gaps = 1/117 (0%)
 Strand = Plus / Minus

                                                                       
Query: 225 gacctcatctccatcaggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtg 284
           |||||||||| |  ||||||| || ||||||   ||||| |||||||| || || || ||
Sbjct: 855 gacctcatcttctgcaggcctctcgagcttcgtcccaacgtcctcctt-taatctccatg 797

                                                                    
Query: 285 cacctccatgagctttcccaggtcaaacttcggggccttcaggatcttcaccttgcg 341
            |||||||| ||||| ||||||||||| || |||||||| |||||||| || |||||
Sbjct: 796 aacctccataagcttgcccaggtcaaattttggggccttgaggatcttgactttgcg 740
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                         
Query: 285      cacctccatgagctttcccaggtcaaacttcggggccttcaggatcttcaccttgcg 341
                ||||||||| ||||| ||||||||||| || |||||||| |||||||| || |||||
Sbjct: 12269667 cacctccataagcttgcccaggtcaaattttggggccttgaggatcttgactttgcg 12269723
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>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 163702

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                      
Query: 285   cacctccatgagctttcccaggtcaaacttcggggccttcaggatcttcaccttgcg 341
             ||||||||| ||||| ||||||||||| || |||||||| |||||||| || |||||
Sbjct: 29662 cacctccataagcttgcccaggtcaaattttggggccttgaggatcttgactttgcg 29718
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>gb|DQ164221.1| Nicotiana tabacum cyc07 mRNA, complete cds
          Length = 786

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 274 tagtcaccgtgcacctccatgagctttcccaggtcaaacttcggggccttcaggatcttc 333
           |||||||| || |||||||| ||||| || |  ||||| || |||||||| |||||||||
Sbjct: 704 tagtcaccatgaacctccatcagcttgccaatatcaaattttggggccttgaggatcttc 645

                   
Query: 334 accttgcg 341
           || |||||
Sbjct: 644 actttgcg 637
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>dbj|AB029635.1| Daucus carota mRNA for cyc07, complete cds
          Length = 1050

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 250 agcttcacaccaacatcctccttgtagtcaccgtgcacctccat 293
           ||||||||||||||||||||   ||||||||| || ||||||||
Sbjct: 749 agcttcacaccaacatcctcagagtagtcaccatgaacctccat 706
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>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold
          Length = 1743090

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 288     ctccatgagctttcccaggtcaaactt 314
               ||||||||| |||||||||||||||||
Sbjct: 1604959 ctccatgagttttcccaggtcaaactt 1604933
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>gb|AC090771.4| Homo sapiens chromosome 18, clone RP11-795H16, complete sequence
          Length = 186031

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 288   ctccatgagctttcccaggtcaaactt 314
             |||||||||||||||||| ||||||||
Sbjct: 90910 ctccatgagctttcccagttcaaactt 90884
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>ref|XM_944491.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a,
           transcript variant 10 (LOC400652), mRNA
          Length = 870

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 288 ctccatgagctttcccaggtcaaactt 314
           |||||||||||||||||| ||||||||
Sbjct: 711 ctccatgagctttcccagttcaaactt 685
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>ref|XM_944488.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a,
           transcript variant 9 (LOC400652), mRNA
          Length = 861

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 288 ctccatgagctttcccaggtcaaactt 314
           |||||||||||||||||| ||||||||
Sbjct: 711 ctccatgagctttcccagttcaaactt 685
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>ref|XM_944486.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a,
           transcript variant 8 (LOC400652), mRNA
          Length = 900

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 288 ctccatgagctttcccaggtcaaactt 314
           |||||||||||||||||| ||||||||
Sbjct: 721 ctccatgagctttcccagttcaaactt 695
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>ref|XM_940167.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a,
           transcript variant 6 (LOC400652), mRNA
          Length = 734

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 288 ctccatgagctttcccaggtcaaactt 314
           |||||||||||||||||| ||||||||
Sbjct: 560 ctccatgagctttcccagttcaaactt 534
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>ref|XM_944482.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a,
           transcript variant 7 (LOC400652), mRNA
          Length = 592

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 288 ctccatgagctttcccaggtcaaactt 314
           |||||||||||||||||| ||||||||
Sbjct: 418 ctccatgagctttcccagttcaaactt 392
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>ref|XM_931855.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a,
           transcript variant 5 (LOC400652), mRNA
          Length = 871

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 288 ctccatgagctttcccaggtcaaactt 314
           |||||||||||||||||| ||||||||
Sbjct: 721 ctccatgagctttcccagttcaaactt 695
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>ref|XM_931846.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a,
           transcript variant 4 (LOC400652), mRNA
          Length = 880

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 288 ctccatgagctttcccaggtcaaactt 314
           |||||||||||||||||| ||||||||
Sbjct: 721 ctccatgagctttcccagttcaaactt 695
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>ref|XM_931841.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a,
           transcript variant 3 (LOC400652), mRNA
          Length = 900

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 288 ctccatgagctttcccaggtcaaactt 314
           |||||||||||||||||| ||||||||
Sbjct: 721 ctccatgagctttcccagttcaaactt 695
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>ref|XM_927103.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a,
           transcript variant 2 (LOC400652), mRNA
          Length = 734

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 288 ctccatgagctttcccaggtcaaactt 314
           |||||||||||||||||| ||||||||
Sbjct: 560 ctccatgagctttcccagttcaaactt 534
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>ref|XM_375543.3| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a,
           transcript variant 1 (LOC400652), mRNA
          Length = 592

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 288 ctccatgagctttcccaggtcaaactt 314
           |||||||||||||||||| ||||||||
Sbjct: 418 ctccatgagctttcccagttcaaactt 392
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>gb|AC090621.10| Homo sapiens chromosome 18, clone RP11-396N11, complete sequence
          Length = 188858

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 288    ctccatgagctttcccaggtcaaactt 314
              |||||||||||||||||| ||||||||
Sbjct: 183136 ctccatgagctttcccagttcaaactt 183162
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>gb|AC146532.3| Otolemur garnettii clone CH256-151F13, complete sequence
          Length = 197659

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 288   ctccatgagctttcccaggtcaaactt 314
             ||||||||| |||||||||||||||||
Sbjct: 59528 ctccatgagttttcccaggtcaaactt 59502
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>gb|DQ268842.1| Solanum tuberosum clone 135C12 40S ribosomal protein S3a-like
           protein mRNA, complete cds
          Length = 1059

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 73/90 (81%)
 Strand = Plus / Minus

                                                                       
Query: 252 cttcacaccaacatcctccttgtagtcaccgtgcacctccatgagctttcccaggtcaaa 311
           ||||||||||||||| ||   ||| |||||||| |||||||| | | | || ||||| ||
Sbjct: 757 cttcacaccaacatcttctgagtaatcaccgtgaacctccatcaacctcccaaggtcgaa 698

                                         
Query: 312 cttcggggccttcaggatcttcaccttgcg 341
            || || ||||||| |||||| ||||||||
Sbjct: 697 tttaggagccttcaagatcttgaccttgcg 668
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>ref|NM_111356.3| Arabidopsis thaliana structural constituent of ribosome AT3G04840
           mRNA, complete cds
          Length = 1004

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 280 ccgtgcacctccatgagctttcccaggtcaaacttcggggccttcaggatctt 332
           ||||| || ||||||||||| || ||||| || || |||||||| ||||||||
Sbjct: 756 ccgtgaacatccatgagcttgccaaggtcgaatttaggggccttgaggatctt 704
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>gb|BT022161.1| Drosophila melanogaster IP01358 full insert cDNA
          Length = 3118

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 196  gcagcagcaacctcctccgca 216
            |||||||||||||||||||||
Sbjct: 1211 gcagcagcaacctcctccgca 1231
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>ref|NM_206456.1| Drosophila melanogaster rotund CG32466-RB, transcript variant B (rn),
            mRNA
          Length = 2444

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 196  gcagcagcaacctcctccgca 216
            |||||||||||||||||||||
Sbjct: 1684 gcagcagcaacctcctccgca 1704
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>ref|NM_141458.2| Drosophila melanogaster rotund CG32466-RA, transcript variant A (rn),
            mRNA
          Length = 3661

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 196  gcagcagcaacctcctccgca 216
            |||||||||||||||||||||
Sbjct: 2901 gcagcagcaacctcctccgca 2921
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>gb|AY081585.1| Arabidopsis thaliana putative 40S ribosomal protein S3A (S phase
           specific) (At3g04840) mRNA, complete cds
          Length = 870

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 280 ccgtgcacctccatgagctttcccaggtcaaacttcggggccttcaggatctt 332
           ||||| || ||||||||||| || ||||| || || |||||||| ||||||||
Sbjct: 698 ccgtgaacatccatgagcttgccaaggtcgaatttaggggccttgaggatctt 646
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>gb|AF395905.1|AF395905 Drosophila melanogaster rotund mRNA, complete cds
          Length = 3658

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 196  gcagcagcaacctcctccgca 216
            |||||||||||||||||||||
Sbjct: 2898 gcagcagcaacctcctccgca 2918
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>gb|AF395904.1|AF395904 Drosophila melanogaster roughened eye mRNA, complete cds
          Length = 2444

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 196  gcagcagcaacctcctccgca 216
            |||||||||||||||||||||
Sbjct: 1684 gcagcagcaacctcctccgca 1704
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>gb|AY062796.1| Arabidopsis thaliana putative 40S ribosomal protein S3A (S phase
           specific) (At3g04840; T9J14.21) mRNA, complete cds
          Length = 1000

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 280 ccgtgcacctccatgagctttcccaggtcaaacttcggggccttcaggatctt 332
           ||||| || ||||||||||| || ||||| || || |||||||| ||||||||
Sbjct: 755 ccgtgaacatccatgagcttgccaaggtcgaatttaggggccttgaggatctt 703
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>dbj|AK220818.1| Arabidopsis thaliana mRNA for 40S ribosomal protein S3A like
           protein, complete cds, clone: RAFL22-32-J16
          Length = 468

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 280 ccgtgcacctccatgagctttcccaggtcaaacttcggggccttcaggatctt 332
           ||||| || ||||||||||| || ||||| || || |||||||| ||||||||
Sbjct: 213 ccgtgaacatccatgagcttgccaaggtcgaatttaggggccttgaggatctt 161
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>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III,
              complete sequence
          Length = 907057

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 196    gcagcagcaacctcctccgca 216
              |||||||||||||||||||||
Sbjct: 867462 gcagcagcaacctcctccgca 867442
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>gb|AC160763.3| Mus musculus BAC clone RP23-238A4 from chromosome 17, complete
            sequence
          Length = 215626

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 80   aagtactcaagaaatcagccatcaa 104
            |||||||||||||| ||||||||||
Sbjct: 3171 aagtactcaagaaaccagccatcaa 3195
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>emb|BX822077.1|CNS0A7LX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB10ZB01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 716

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 280 ccgtgcacctccatgagctttcccaggtcaaacttcggggccttcaggatctt 332
           ||||| || ||||||||||| || ||||| || || |||||||| ||||||||
Sbjct: 468 ccgtgaacatccatgagcttgccaaggtcgaatttaggggccttgaggatctt 416
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>emb|BX824488.1|CNS0A5KP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH51ZC05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 927

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 280 ccgtgcacctccatgagctttcccaggtcaaacttcggggccttcaggatctt 332
           ||||| || ||||||||||| || ||||| || || |||||||| ||||||||
Sbjct: 688 ccgtgaacatccatgagcttgccaaggtcgaatttaggggccttgaggatctt 636
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>gb|AC008029.3|AC008029 Drosophila melanogaster, chromosome 3R, region 84D-84D, BAC clone
              BACR01C11, complete sequence
          Length = 176991

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 196    gcagcagcaacctcctccgca 216
              |||||||||||||||||||||
Sbjct: 137461 gcagcagcaacctcctccgca 137441
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>gb|AC154561.2| Mus musculus BAC clone RP23-400M17 from chromosome 17, complete
             sequence
          Length = 191047

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 80    aagtactcaagaaatcagccatcaa 104
             |||||||||||||| ||||||||||
Sbjct: 73532 aagtactcaagaaaccagccatcaa 73508
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>gb|AY085787.1| Arabidopsis thaliana clone 18185 mRNA, complete sequence
          Length = 1001

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 280 ccgtgcacctccatgagctttcccaggtcaaacttcggggccttcaggatctt 332
           ||||| || ||||||||||| || ||||| || || |||||||| ||||||||
Sbjct: 756 ccgtgaacatccatgagcttgccaaggtcgaatttaggggccttgaggatctt 704
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>gb|AY849388.1| Vitis vinifera cultivar Riesling cyc07 mRNA, partial cds
          Length = 879

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 66/81 (81%)
 Strand = Plus / Minus

                                                                       
Query: 252 cttcacaccaacatcctccttgtagtcaccgtgcacctccatgagctttcccaggtcaaa 311
           ||||||||||||||| ||   ||||||||| || |||||||| | |||||| || |||||
Sbjct: 654 cttcacaccaacatcttcagagtagtcaccatgaacctccatcaactttccaagatcaaa 595

                                
Query: 312 cttcggggccttcaggatctt 332
            || || || |||| ||||||
Sbjct: 594 tttgggagctttcaagatctt 574
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>ref|NM_209036.1| Eremothecium gossypii ACR281Cp (ACR281C), mRNA
          Length = 3780

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 196 gcagcagcaacctcctccgca 216
           |||||||||||||||||||||
Sbjct: 846 gcagcagcaacctcctccgca 866
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>gb|AE003672.4| Drosophila melanogaster chromosome 3R, section 12 of 118 of the complete
              sequence
          Length = 301379

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 196    gcagcagcaacctcctccgca 216
              |||||||||||||||||||||
Sbjct: 188870 gcagcagcaacctcctccgca 188850
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>gb|L31645.1|HNNSPSP Helianthus annuus ribosomal protein S3a mRNA, complete cds
          Length = 982

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 84/105 (80%)
 Strand = Plus / Minus

                                                                       
Query: 239 caggcctgtcaagcttcacaccaacatcctccttgtagtcaccgtgcacctccatgagct 298
           |||||||||| | ||||||||||||||| ||   ||| || || || |||||||| |  |
Sbjct: 808 caggcctgtccaacttcacaccaacatcttcagagtaatctccatgaacctccatcaatt 749

                                                        
Query: 299 ttcccaggtcaaacttcggggccttcaggatcttcaccttgcgga 343
           | || | ||||||||| || ||||||| |||||| || |||||||
Sbjct: 748 tcccgatgtcaaacttgggtgccttcaagatcttgactttgcgga 704
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>gb|DQ214673.1| Taeniopygia guttata clone 0061P0008B04 ribosomal protein S3a-like
           mRNA, complete sequence
          Length = 922

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 277 tcaccgtgcacctccatgagctttcccaggtcaaacttcggggccttcaggatcttcacc 336
           ||||| |||| |||||| ||||| ||||  |||||||| ||   ||| || |||||||||
Sbjct: 770 tcaccatgcagctccatcagcttgcccaattcaaacttgggcttcttgagcatcttcacc 711

                   
Query: 337 ttgcggac 344
           ||||||||
Sbjct: 710 ttgcggac 703
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>gb|DQ214672.1| Taeniopygia guttata clone 0058P0017B06 ribosomal protein S3a-like
           mRNA, complete sequence
          Length = 906

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 277 tcaccgtgcacctccatgagctttcccaggtcaaacttcggggccttcaggatcttcacc 336
           ||||| |||| |||||| ||||| ||||  |||||||| ||   ||| || |||||||||
Sbjct: 752 tcaccatgcagctccatcagcttgcccaattcaaacttgggcttcttgagcatcttcacc 693

                   
Query: 337 ttgcggac 344
           ||||||||
Sbjct: 692 ttgcggac 685
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>gb|DQ214671.1| Taeniopygia guttata clone 0058P0045E12 ribosomal protein S3a-like
           mRNA, complete sequence
          Length = 893

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 277 tcaccgtgcacctccatgagctttcccaggtcaaacttcggggccttcaggatcttcacc 336
           ||||| |||| |||||| ||||| ||||  |||||||| ||   ||| || |||||||||
Sbjct: 741 tcaccatgcagctccatcagcttgcccaattcaaacttgggcttcttgagcatcttcacc 682

                   
Query: 337 ttgcggac 344
           ||||||||
Sbjct: 681 ttgcggac 674
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>gb|DQ214670.1| Taeniopygia guttata clone 0058P0030H07 ribosomal protein S3a-like
           mRNA, complete sequence
          Length = 879

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 277 tcaccgtgcacctccatgagctttcccaggtcaaacttcggggccttcaggatcttcacc 336
           ||||| |||| |||||| ||||| ||||  |||||||| ||   ||| || |||||||||
Sbjct: 725 tcaccatgcagctccatcagcttgcccaattcaaacttgggcttcttgagcatcttcacc 666

                   
Query: 337 ttgcggac 344
           ||||||||
Sbjct: 665 ttgcggac 658
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>gb|DQ214669.1| Taeniopygia guttata clone 0061P0016E10 ribosomal protein S3a-like
           mRNA, complete sequence
          Length = 547

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 277 tcaccgtgcacctccatgagctttcccaggtcaaacttcggggccttcaggatcttcacc 336
           ||||| |||| |||||| ||||| ||||  |||||||| ||   ||| || |||||||||
Sbjct: 397 tcaccatgcagctccatcagcttgcccaattcaaacttgggcttcttgagcatcttcacc 338

                   
Query: 337 ttgcggac 344
           ||||||||
Sbjct: 337 ttgcggac 330
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>gb|DQ214668.1| Taeniopygia guttata clone 0063P0025A12 ribosomal protein S3a-like
           mRNA, complete sequence
          Length = 630

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 277 tcaccgtgcacctccatgagctttcccaggtcaaacttcggggccttcaggatcttcacc 336
           ||||| |||| |||||| ||||| ||||  |||||||| ||   ||| || |||||||||
Sbjct: 476 tcaccatgcagctccatcagcttgcccaattcaaacttgggcttcttgagcatcttcacc 417

                   
Query: 337 ttgcggac 344
           ||||||||
Sbjct: 416 ttgcggac 409
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>gb|AC148997.1| Mus musculus BAC clone RP23-338B6 from chromosome 7, complete sequence
          Length = 232770

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   ctcctccgcaccaggaatga 226
             ||||||||||||||||||||
Sbjct: 38479 ctcctccgcaccaggaatga 38460
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>gb|AC135639.4| Mus musculus BAC clone RP23-330O16 from chromosome 7, complete sequence
          Length = 217404

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    ctcctccgcaccaggaatga 226
              ||||||||||||||||||||
Sbjct: 181258 ctcctccgcaccaggaatga 181239
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>emb|AL356127.8| Human DNA sequence from clone RP11-368P1 on chromosome 6, complete
             sequence
          Length = 139086

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    ccatcaaaactgactacaaa 117
             ||||||||||||||||||||
Sbjct: 50732 ccatcaaaactgactacaaa 50751
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>emb|AL008712.1|HS84F12 Human DNA sequence from clone RP1-84F12 on chromosome Xq25-26.3
             Contains part of the GPC3 gene for glypican 3, complete
             sequence
          Length = 78011

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   cagcagcagcaacctcctcc 213
             ||||||||||||||||||||
Sbjct: 24008 cagcagcagcaacctcctcc 23989
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>gb|AC135960.14| Pan troglodytes clone rp43-55o12, complete sequence
          Length = 157430

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   cctcatctccatcaggcctg 246
             ||||||||||||||||||||
Sbjct: 15763 cctcatctccatcaggcctg 15782
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>gb|AF093109.1| Tortula ruralis ribosomal protein S3 (rps3) mRNA, complete cds
          Length = 899

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 304 aggtcaaacttcggggccttcaggatcttcac 335
           ||||| ||||| |||||||| |||||||||||
Sbjct: 689 aggtcgaacttgggggccttgaggatcttcac 658
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>gb|AC140899.3| Homo sapiens chromosome 16 clone RP11-792K9, complete sequence
          Length = 194490

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 195    agcagcagcaacctcctccgcaccagga 222
              ||||||| ||||||||||| ||||||||
Sbjct: 176973 agcagcaacaacctcctcctcaccagga 176946
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>gb|AC009465.7|AC009465 Arabidopsis thaliana chromosome 3 BAC T9J14 genomic sequence, complete
             sequence
          Length = 93234

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 289   tccatgagctttcccaggtcaaacttcggggccttcaggatctt 332
             ||||||||||| || ||||| || || |||||||| ||||||||
Sbjct: 73713 tccatgagcttgccaaggtcgaatttaggggccttgaggatctt 73756
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>ref|XM_231763.3| PREDICTED: Rattus norvegicus nuclear factor, erythroid derived 2,
            like 3 (predicted) (Nfe2l3_predicted), mRNA
          Length = 3024

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  acatatatcatcttctagat 157
            ||||||||||||||||||||
Sbjct: 2643 acatatatcatcttctagat 2624
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>gb|AC000055.1|HSAC000055 Human PAC clone DJ073F11 from Xq23, complete sequence
          Length = 93578

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 152  ctagataagaagcagcaaaa 171
            ||||||||||||||||||||
Sbjct: 7414 ctagataagaagcagcaaaa 7395


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,669,264
Number of Sequences: 3902068
Number of extensions: 3669264
Number of successful extensions: 65385
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 65134
Number of HSP's gapped (non-prelim): 247
length of query: 345
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 323
effective length of database: 17,147,199,772
effective search space: 5538545526356
effective search space used: 5538545526356
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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