ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl16h06 |
|---|---|
| Clone Library Name | barley_pub |
>HUP3_CHLKE (Q39525) H(+)/hexose cotransporter 3| Length = 534 Score = 31.2 bits (69), Expect = 0.71 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = -2 Query: 181 SKPACEINDPAPQFFVDEIFLHG*LSLVIFSPWLREN 71 + P C ++P Q FV +FL G +S IFS W+ N Sbjct: 74 TSPYCTYDNPKLQLFVSSLFLAGLIS-CIFSAWITRN 109
>MTGA_NITEU (Q82U73) Monofunctional biosynthetic peptidoglycan transglycosylase| (EC 2.4.2.-) (Monofunctional TGase) Length = 244 Score = 30.0 bits (66), Expect = 1.6 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Frame = +3 Query: 3 HQEPPFQGLESHISRKICRKEN-RFSLSQGEKITSES*PWRKISSTKNWGA-GSFISQ 170 HQ ++ + SH+ R + E+ RF QG + W+K + W A GS ISQ Sbjct: 75 HQWVDYEQISSHLKRAVIAAEDARFLQHQGFDYKAIETAWKKNLKQRKWAAGGSTISQ 132
>AMYR_DROAN (O18344) Alpha-amylase-related protein precursor (EC 3.2.1.1) (Amy| c6) Length = 493 Score = 28.5 bits (62), Expect = 4.6 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = -2 Query: 175 PACEINDPAPQFFVDEIFLHG*LSLVIFSPWLRENLFSFL 56 P+CEI D +F V + L G L S W+R L FL Sbjct: 154 PSCEITDWNDRFQVQQCELVGLKDLDQSSEWVRSKLIEFL 193
>AMYR_DROVA (Q9NJN7) Alpha-amylase-related protein precursor (EC 3.2.1.1)| Length = 494 Score = 28.5 bits (62), Expect = 4.6 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = -2 Query: 175 PACEINDPAPQFFVDEIFLHG*LSLVIFSPWLRENLFSFL 56 P+CEI D +F V + L G L S W+R L FL Sbjct: 155 PSCEITDWNDRFQVQQCELVGLKDLDQSSDWVRSKLIEFL 194
>AMYR_DROEC (O77012) Alpha-amylase-related protein precursor (EC 3.2.1.1)| Length = 494 Score = 28.5 bits (62), Expect = 4.6 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = -2 Query: 175 PACEINDPAPQFFVDEIFLHG*LSLVIFSPWLRENLFSFL 56 P+CEI D +F V + L G L S W+R L FL Sbjct: 155 PSCEITDWNDRFQVQQCELVGLKDLDQSSDWVRSKLIEFL 194
>AMYR_DROBP (Q9NJN8) Alpha-amylase-related protein precursor (EC 3.2.1.1)| Length = 494 Score = 28.5 bits (62), Expect = 4.6 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = -2 Query: 175 PACEINDPAPQFFVDEIFLHG*LSLVIFSPWLRENLFSFL 56 P+CEI D +F V + L G L S W+R L FL Sbjct: 155 PSCEITDWNDRFQVQQCELVGLKDLDQSSEWVRSKLIEFL 194
>AMYR_DROTK (O77018) Alpha-amylase-related protein precursor (EC 3.2.1.1)| Length = 493 Score = 28.1 bits (61), Expect = 6.0 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = -2 Query: 175 PACEINDPAPQFFVDEIFLHG*LSLVIFSPWLRENLFSFL 56 P CEI D +F V + L G L S W+R L FL Sbjct: 154 PTCEITDWNDRFQVQQCELVGLKDLDQASEWVRSKLIEFL 193
>AMYR_DROTE (O76260) Alpha-amylase-related protein precursor (EC 3.2.1.1)| Length = 493 Score = 28.1 bits (61), Expect = 6.0 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = -2 Query: 175 PACEINDPAPQFFVDEIFLHG*LSLVIFSPWLRENLFSFL 56 P CEI D +F V + L G L S W+R L FL Sbjct: 154 PTCEITDWNDRFQVQQCELVGLKDLDQSSDWVRSKLIEFL 193
>AMYR_DROSI (O77016) Alpha-amylase-related protein precursor (EC 3.2.1.1)| Length = 493 Score = 28.1 bits (61), Expect = 6.0 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = -2 Query: 175 PACEINDPAPQFFVDEIFLHG*LSLVIFSPWLRENLFSFL 56 P CEI D +F V + L G L S W+R L FL Sbjct: 154 PTCEITDWNDRFQVQQCELVGLKDLDQSSDWVRSKLIEFL 193
>AMYR_DROSE (O76261) Alpha-amylase-related protein precursor (EC 3.2.1.1)| Length = 493 Score = 28.1 bits (61), Expect = 6.0 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = -2 Query: 175 PACEINDPAPQFFVDEIFLHG*LSLVIFSPWLRENLFSFL 56 P CEI D +F V + L G L S W+R L FL Sbjct: 154 PTCEITDWNDRFQVQQCELVGLKDLDQSSDWVRSKLIEFL 193
>AMYR_DROOR (O77015) Alpha-amylase-related protein precursor (EC 3.2.1.1)| Length = 493 Score = 28.1 bits (61), Expect = 6.0 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = -2 Query: 175 PACEINDPAPQFFVDEIFLHG*LSLVIFSPWLRENLFSFL 56 P CEI D +F V + L G L S W+R L FL Sbjct: 154 PTCEITDWNDRFQVQQCELVGLKDLNQSSDWVRSKLIEFL 193
>AMYR_DROMA (O77014) Alpha-amylase-related protein precursor (EC 3.2.1.1)| Length = 493 Score = 28.1 bits (61), Expect = 6.0 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = -2 Query: 175 PACEINDPAPQFFVDEIFLHG*LSLVIFSPWLRENLFSFL 56 P CEI D +F V + L G L S W+R L FL Sbjct: 154 PTCEITDWNDRFQVQQCELVGLKDLDQSSDWVRSKLIEFL 193
>AMYR_DROER (O76265) Alpha-amylase-related protein precursor (EC 3.2.1.1)| Length = 493 Score = 28.1 bits (61), Expect = 6.0 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = -2 Query: 175 PACEINDPAPQFFVDEIFLHG*LSLVIFSPWLRENLFSFL 56 P CEI D +F V + L G L S W+R L FL Sbjct: 154 PTCEITDWNDRFQVQQCELVGLKDLNQSSDWVRSKLIEFL 193
>AMYR_DROEL (Q9NJP0) Alpha-amylase-related protein precursor (EC 3.2.1.1)| Length = 493 Score = 28.1 bits (61), Expect = 6.0 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = -2 Query: 175 PACEINDPAPQFFVDEIFLHG*LSLVIFSPWLRENLFSFL 56 P+CEI D +F V + L G L S W+R L FL Sbjct: 154 PSCEITDWNNRFQVQQCELVGLKDLDQSSDWVRSKLIEFL 193
>AMYR_DROAP (O77011) Alpha-amylase-related protein precursor (EC 3.2.1.1)| Length = 494 Score = 28.1 bits (61), Expect = 6.0 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = -2 Query: 175 PACEINDPAPQFFVDEIFLHG*LSLVIFSPWLRENLFSFL 56 P CEI D +F V + L G L S W+R L FL Sbjct: 155 PTCEITDWNDRFQVQQCELVGLKDLDQSSEWVRSKLIEFL 194
>PHAZ_PSEFL (Q51718) Poly(3-hydroxyoctanoate) depolymerase precursor (EC| 3.1.1.76) ([P(3HO)] depolymerase) (PHO depolymerase) (PHA depolymerase) Length = 278 Score = 27.7 bits (60), Expect = 7.9 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = -2 Query: 193 YDSISKPACEINDPAPQFFVDEIFLHG*LSLVIFSPWLRENLF 65 Y + S P C + D P +FLHG + V+ PW +L+ Sbjct: 199 YATCSGPLCVVPDQLPADHPPTLFLHGFVDAVV--PWWSMDLY 239 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,458,757 Number of Sequences: 219361 Number of extensions: 685570 Number of successful extensions: 1421 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1405 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1421 length of database: 80,573,946 effective HSP length: 70 effective length of database: 65,218,676 effective search space used: 1565248224 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
