Clone Name | rbastl16g09 |
---|---|
Clone Library Name | barley_pub |
>emb|CR538741.13| Zebrafish DNA sequence from clone DKEY-97J15 in linkage group 5, complete sequence Length = 122930 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 gtcaaatctgagatgaagcat 114 ||||||||||||||||||||| Sbjct: 39964 gtcaaatctgagatgaagcat 39944
>gb|DP000036.1| Papio anubis target 106 genomic scaffold Length = 492848 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 132 tcagtactctcaagtatgcatcttg 156 |||||||||||||| |||||||||| Sbjct: 83844 tcagtactctcaagaatgcatcttg 83868
>emb|BX640512.4| Zebrafish DNA sequence from clone DKEY-58F10 in linkage group 5, complete sequence Length = 191256 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 gtcaaatctgagatgaagcat 114 ||||||||||||||||||||| Sbjct: 90149 gtcaaatctgagatgaagcat 90169
>gb|AC111106.10| Mus musculus chromosome 3, clone RP23-193O12, complete sequence Length = 202749 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 atagaataagcttacagtgc 272 |||||||||||||||||||| Sbjct: 125242 atagaataagcttacagtgc 125223
>gb|AE017129.1| Yersinia pestis biovar Medievalis str. 91001 section 3 of 16 of the complete genome Length = 290002 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aaaccccaacaattgttgag 57 |||||||||||||||||||| Sbjct: 207357 aaaccccaacaattgttgag 207338
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aaaccccaacaattgttgag 57 |||||||||||||||||||| Sbjct: 1108333 aaaccccaacaattgttgag 1108314
>gb|AC117201.2| Mus musculus BAC clone RP23-216E6 from 16, complete sequence Length = 218980 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 114 ttgccaaatcttcaagcttcagtactct 141 |||| |||| |||||||||||||||||| Sbjct: 67886 ttgcaaaattttcaagcttcagtactct 67859
>ref|NM_011674.2| Mus musculus UDP galactosyltransferase 8A (Ugt8a), mRNA Length = 3439 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 atagaataagcttacagtgc 272 |||||||||||||||||||| Sbjct: 2881 atagaataagcttacagtgc 2862
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aaaccccaacaattgttgag 57 |||||||||||||||||||| Sbjct: 1107972 aaaccccaacaattgttgag 1107953
>gb|AC138774.4| Homo sapiens BAC clone RP11-1320P3 from UL, complete sequence Length = 194050 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 cttccaaaagctgtctggga 26 |||||||||||||||||||| Sbjct: 187964 cttccaaaagctgtctggga 187945
>emb|AJ414155.1| Yersinia pestis strain CO92 complete genome; segment 15/20 Length = 205050 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aaaccccaacaattgttgag 57 |||||||||||||||||||| Sbjct: 193149 aaaccccaacaattgttgag 193168
>gb|BC016885.1| Mus musculus UDP galactosyltransferase 8A, mRNA (cDNA clone MGC:18397 IMAGE:4223057), complete cds Length = 3439 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 atagaataagcttacagtgc 272 |||||||||||||||||||| Sbjct: 2881 atagaataagcttacagtgc 2862
>gb|AC156608.10| Mus musculus chromosome 8, clone RP23-303A11, complete sequence Length = 229633 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cagtcaaatctgagatgaag 111 |||||||||||||||||||| Sbjct: 95774 cagtcaaatctgagatgaag 95793
>dbj|AK128994.1| Mus musculus cDNA fis, clone TRACH3026744, highly similar to 2-hydroxyacylsphingosine 1-beta-galactosyltransferase precursor (EC 2.4.1.45) Length = 3598 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 atagaataagcttacagtgc 272 |||||||||||||||||||| Sbjct: 2880 atagaataagcttacagtgc 2861
>dbj|AK137364.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630028M01 product:UDP-glucuronosyltransferase 8, full insert sequence Length = 3600 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 atagaataagcttacagtgc 272 |||||||||||||||||||| Sbjct: 2887 atagaataagcttacagtgc 2868
>dbj|AK144005.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:F530015P08 product:UDP-glucuronosyltransferase 8, full insert sequence Length = 3671 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 atagaataagcttacagtgc 272 |||||||||||||||||||| Sbjct: 2887 atagaataagcttacagtgc 2868
>dbj|AK163650.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN full-length enriched library, clone:B830013E23 product:UDP-glucuronosyltransferase 8, full insert sequence Length = 3392 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 atagaataagcttacagtgc 272 |||||||||||||||||||| Sbjct: 2848 atagaataagcttacagtgc 2829
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 cgcatcatatctagctagaa 298 |||||||||||||||||||| Sbjct: 28101887 cgcatcatatctagctagaa 28101868
>gb|AC068481.2| Homo sapiens BAC clone CTD-2016F17 from 2, complete sequence Length = 155481 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ttcagcttccaaaagctgtc 21 |||||||||||||||||||| Sbjct: 109269 ttcagcttccaaaagctgtc 109288
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 cgcatcatatctagctagaa 298 |||||||||||||||||||| Sbjct: 99382 cgcatcatatctagctagaa 99363
>gb|U48896.1|MMCGT6 Mus musculus UDP-galactose:ceramide galactosyltransferase (Cgt) gene, exon 6 and complete cds Length = 3009 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 atagaataagcttacagtgc 272 |||||||||||||||||||| Sbjct: 1553 atagaataagcttacagtgc 1534 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,407,483 Number of Sequences: 3902068 Number of extensions: 2407483 Number of successful extensions: 41572 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 41508 Number of HSP's gapped (non-prelim): 64 length of query: 341 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 319 effective length of database: 17,147,199,772 effective search space: 5469956727268 effective search space used: 5469956727268 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)