Clone Name | rbastl16g08 |
---|---|
Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 48.5 bits (114), Expect = 4e-06 Identities = 22/26 (84%), Positives = 23/26 (88%) Frame = -2 Query: 332 LYPNTSDHTGQAEGLTARGIPNSISI 255 LYPNTSDH G A GLTA+GIPNSISI Sbjct: 837 LYPNTSDHKGAAAGLTAKGIPNSISI 862
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 46.2 bits (108), Expect = 2e-05 Identities = 20/26 (76%), Positives = 24/26 (92%) Frame = -2 Query: 332 LYPNTSDHTGQAEGLTARGIPNSISI 255 ++PNTSD+ G AEG+TARGIPNSISI Sbjct: 838 MFPNTSDNKGAAEGITARGIPNSISI 863
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 45.8 bits (107), Expect = 3e-05 Identities = 21/26 (80%), Positives = 23/26 (88%) Frame = -2 Query: 332 LYPNTSDHTGQAEGLTARGIPNSISI 255 LYPNTSD TG A G+TA+GIPNSISI Sbjct: 841 LYPNTSDVTGAAAGITAKGIPNSISI 866
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 44.3 bits (103), Expect = 8e-05 Identities = 21/26 (80%), Positives = 22/26 (84%) Frame = -2 Query: 332 LYPNTSDHTGQAEGLTARGIPNSISI 255 LYPNTSD G A GL+ARGIPNSISI Sbjct: 845 LYPNTSDLKGDAAGLSARGIPNSISI 870
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 38.5 bits (88), Expect = 0.004 Identities = 20/27 (74%), Positives = 22/27 (81%), Gaps = 1/27 (3%) Frame = -2 Query: 332 LYPNTSDHTGQ-AEGLTARGIPNSISI 255 LYPNTSD T + +GLTA GIPNSISI Sbjct: 851 LYPNTSDVTKEKGQGLTAMGIPNSISI 877
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 32.3 bits (72), Expect = 0.30 Identities = 16/24 (66%), Positives = 16/24 (66%) Frame = -2 Query: 326 PNTSDHTGQAEGLTARGIPNSISI 255 P T H EGLT RGIPNSISI Sbjct: 841 PYTLLHPSSKEGLTFRGIPNSISI 864
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 31.2 bits (69), Expect = 0.67 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -2 Query: 326 PNTSDHTGQAEGLTARGIPNSISI 255 P T H EGLT +GIPNSISI Sbjct: 841 PYTLLHRSSEEGLTFKGIPNSISI 864
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 30.8 bits (68), Expect = 0.88 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -2 Query: 326 PNTSDHTGQAEGLTARGIPNSISI 255 P T + EGLT RGIPNSISI Sbjct: 843 PYTLLYPSSEEGLTCRGIPNSISI 866
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -2 Query: 326 PNTSDHTGQAEGLTARGIPNSISI 255 P T + EGLT RGIPNSISI Sbjct: 830 PYTLLYPSSEEGLTFRGIPNSISI 853
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -2 Query: 326 PNTSDHTGQAEGLTARGIPNSISI 255 P T + EGLT RGIPNSISI Sbjct: 816 PYTLLYPSSEEGLTFRGIPNSISI 839
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/26 (61%), Positives = 18/26 (69%) Frame = -2 Query: 332 LYPNTSDHTGQAEGLTARGIPNSISI 255 L+PN+ EGLT RGIPNSISI Sbjct: 847 LHPNS-------EGLTCRGIPNSISI 865
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -2 Query: 326 PNTSDHTGQAEGLTARGIPNSISI 255 P T + EGLT RGIPNSISI Sbjct: 838 PYTLLYPSSKEGLTFRGIPNSISI 861
>E74EA_DROME (P20105) Ecdysone-induced protein 74EF isoform A (ETS-related| protein E74A) Length = 829 Score = 29.6 bits (65), Expect = 2.0 Identities = 22/59 (37%), Positives = 30/59 (50%) Frame = +1 Query: 124 HPYCLNYSCTGTTLCHTHTQASSGVSKQG*HKSMRSRRRTCSDQMDMLFGMPLAVSPSA 300 +P+ NY+ T TT + A SGVS S S + C+D++ GMP A S SA Sbjct: 404 NPHHRNYT-TATTGSFPPSPADSGVSDVD---SSSSGGQPCADELKARLGMPPATSASA 458
>E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ETS-related| protein E74B) Length = 883 Score = 29.6 bits (65), Expect = 2.0 Identities = 22/59 (37%), Positives = 30/59 (50%) Frame = +1 Query: 124 HPYCLNYSCTGTTLCHTHTQASSGVSKQG*HKSMRSRRRTCSDQMDMLFGMPLAVSPSA 300 +P+ NY+ T TT + A SGVS S S + C+D++ GMP A S SA Sbjct: 458 NPHHRNYT-TATTGSFPPSPADSGVSDVD---SSSSGGQPCADELKARLGMPPATSASA 512
>KRA49_HUMAN (Q9BYQ8) Keratin-associated protein 4-9 (Keratin-associated protein| 4.9) (Ultrahigh sulfur keratin-associated protein 4.9) (Fragment) Length = 191 Score = 29.6 bits (65), Expect = 2.0 Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 3/37 (8%) Frame = +1 Query: 91 ASACRSD---PSCTHPYCLNYSCTGTTLCHTHTQASS 192 +S CR P C P C SC TT CH SS Sbjct: 68 SSCCRPQCCQPVCCQPTCCRPSCCETTCCHPRCCISS 104
>RPM1_CAEEL (Q17551) Ubiquitin ligase protein rpm-1 (EC 6.3.2.-)| (Pam/highwire/rpm-1 protein) (Regulator of presynaptic morphology protein 1) (Synapse defective protein 3) Length = 3766 Score = 29.3 bits (64), Expect = 2.6 Identities = 11/33 (33%), Positives = 17/33 (51%) Frame = +1 Query: 109 DPSCTHPYCLNYSCTGTTLCHTHTQASSGVSKQ 207 D +CTH C+NY+ T + HT G+ + Sbjct: 3463 DGTCTHEDCVNYAKTACQVMHTCNHFCGGIRNE 3495
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 29.3 bits (64), Expect = 2.6 Identities = 14/18 (77%), Positives = 15/18 (83%) Frame = -2 Query: 308 TGQAEGLTARGIPNSISI 255 T + EGLT RGIPNSISI Sbjct: 845 TCEDEGLTFRGIPNSISI 862
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 28.5 bits (62), Expect = 4.4 Identities = 13/14 (92%), Positives = 13/14 (92%) Frame = -2 Query: 296 EGLTARGIPNSISI 255 EGLT RGIPNSISI Sbjct: 844 EGLTFRGIPNSISI 857
>Y735_AGRT5 (Q8UHE7) Hypothetical RNA methyltransferase Atu0735/AGR_C_1331 (EC| 2.1.1.-) Length = 416 Score = 28.5 bits (62), Expect = 4.4 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Frame = +1 Query: 61 DALTGSQLS*ASACRSDPSCTH--PYCLNYSCTGTTLCHTHTQASSGVSKQG*HKSMRSR 234 D T ++ ASA R DP C H P +N +C G +L H Q ++ ++RS+ Sbjct: 44 DQGTVMSITEASADRRDPVCRHFGPEGINGTCGGCSLQHLADQPYHAFKRELVVSALRSK 103 Query: 235 RRT 243 T Sbjct: 104 GLT 106
>KRA45_HUMAN (Q9BYR2) Keratin-associated protein 4-5 (Keratin-associated protein| 4.5) (Ultrahigh sulfur keratin-associated protein 4.5) Length = 186 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = +1 Query: 91 ASACRSDPSCTHPYCLNYSCTGTTLCHT 174 +S CR P C P C +C TT C T Sbjct: 73 SSCCR--PCCCRPSCCQTTCCRTTCCRT 98 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 3/31 (9%) Frame = +1 Query: 91 ASACRS---DPSCTHPYCLNYSCTGTTLCHT 174 +S CR + SC P C SC TT C T Sbjct: 63 SSCCRPYCCESSCCRPCCCRPSCCQTTCCRT 93
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 27.7 bits (60), Expect = 7.4 Identities = 11/14 (78%), Positives = 13/14 (92%) Frame = -2 Query: 296 EGLTARGIPNSISI 255 EGLT +GIPNS+SI Sbjct: 846 EGLTGKGIPNSVSI 859
>NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 precursor (Notch| 2) (Motch B) [Contains: Notch 2 extracellular truncation; Notch 2 intracellular domain] Length = 2470 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = -3 Query: 172 CDRELCRCMNN*GNKGACTTGLIGMRKLSSAGYRSMHRRVQK 47 C ++ C++N G CT GL G + L AG+ ++ V K Sbjct: 715 CYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGVNCEVDK 756
>KRA44_HUMAN (Q9BYR3) Keratin-associated protein 4-4 (Keratin-associated protein| 4.4) (Ultrahigh sulfur keratin-associated protein 4.4) Length = 166 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = +1 Query: 94 SACRSDPSCTHPYCLNYSCTGTTLCHTHTQASS 192 S C S SC P C +C TT CH SS Sbjct: 39 SCCVS--SCCRPQCCQTTCCRTTCCHPSCCVSS 69
>E74EF_DROVI (Q7M3M6) Ecdysone-induced protein 74EF (ETS-related protein E74A)| Length = 873 Score = 27.7 bits (60), Expect = 7.4 Identities = 20/59 (33%), Positives = 29/59 (49%) Frame = +1 Query: 124 HPYCLNYSCTGTTLCHTHTQASSGVSKQG*HKSMRSRRRTCSDQMDMLFGMPLAVSPSA 300 +P+ NY+ T TT + A SGVS S S + C+D++ GMP + SA Sbjct: 447 NPHHRNYT-TATTGSFPPSPADSGVSDVD---SSSSGGQPCADELKARLGMPTTAATSA 501
>NOTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 precursor (Notch| 2) (hN2) [Contains: Notch 2 extracellular truncation; Notch 2 intracellular domain] Length = 2471 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = -3 Query: 172 CDRELCRCMNN*GNKGACTTGLIGMRKLSSAGYRSMHRRVQK 47 C ++ C++N G CT GL G + L AG+ ++ V K Sbjct: 717 CYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGINCEVDK 758
>SEPP1_PONPY (Q5R8W9) Selenoprotein P precursor (SeP)| Length = 381 Score = 27.7 bits (60), Expect = 7.4 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -1 Query: 327 PKHLRPHGTGRGAHRQGHPE 268 P L H +G HRQGHPE Sbjct: 240 PPGLHHHHKHKGQHRQGHPE 259
>SEPP1_HUMAN (P49908) Selenoprotein P precursor (SeP)| Length = 381 Score = 27.7 bits (60), Expect = 7.4 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -1 Query: 327 PKHLRPHGTGRGAHRQGHPE 268 P L H +G HRQGHPE Sbjct: 240 PPGLHHHHKHKGQHRQGHPE 259
>CF208_HUMAN (Q9H8X3) Protein C6orf208| Length = 128 Score = 27.7 bits (60), Expect = 7.4 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = +1 Query: 82 LS*ASACRSDPSCTHPYCLNYSCTGTTLCHTHTQASSGVS 201 +S SAC S S H LN C G T+ +H+ A +GVS Sbjct: 1 MSLCSACTSPAS--HQLLLN--CQGQTVAKSHSSADAGVS 36
>KPTA_BURS3 (Q395F2) Probable RNA 2'-phosphotransferase (EC 2.7.-.-)| Length = 194 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +2 Query: 89 ELPHADQTRRARTLIALIIHAPAQLSV 169 ELP D TR +RTL L+ HAP + + Sbjct: 7 ELPAPDATRISRTLSYLLRHAPQTIGL 33
>ARNT_RAT (P41739) Aryl hydrocarbon receptor nuclear translocator (ARNT| protein) (Dioxin receptor, nuclear translocator) (Hypoxia-inducible factor 1 beta) (HIF-1 beta) Length = 800 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%) Frame = -1 Query: 288 HRQGHPEQHIHLI*ARPSSRPHAF--VLSLL 202 HR EQH+ A+PSS+P F +LS+L Sbjct: 747 HRSSSNEQHVQPTSAQPSSQPEVFQEMLSML 777
>ESPL1_HUMAN (Q14674) Separin (EC 3.4.22.49) (Separase) (Caspase-like protein| ESPL1) (Extra spindle poles-like 1 protein) Length = 2120 Score = 27.3 bits (59), Expect = 9.7 Identities = 16/48 (33%), Positives = 23/48 (47%) Frame = +3 Query: 153 RHNSLSHTHTS*LRCKQARIAQKHEVSTTDVLRSDGYAVRDAPGGEPL 296 RH L+H H +Q AQKH S + G ++++ PG PL Sbjct: 1629 RHQLLTHLH------RQLSKAQKHRGSLEIADQLQGLSLQEMPGDVPL 1670 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,330,939 Number of Sequences: 219361 Number of extensions: 1014826 Number of successful extensions: 2665 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 2490 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2647 length of database: 80,573,946 effective HSP length: 86 effective length of database: 61,708,900 effective search space used: 1481013600 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)