ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl16g06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KKQ1_YEAST (P36005) Probable serine/threonine-protein kinase YKL... 29 3.8

>KKQ1_YEAST (P36005) Probable serine/threonine-protein kinase YKL161C (EC|
           2.7.11.1)
          Length = 433

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 176 HSFLCMWRKLDLDYEWLCSQTFPFNF 99
           H +L MW   D+D E+ C +TF F F
Sbjct: 315 HPYLSMWH--DIDEEFSCQKTFRFEF 338


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,135,519
Number of Sequences: 219361
Number of extensions: 433267
Number of successful extensions: 707
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 80,573,946
effective HSP length: 44
effective length of database: 70,922,062
effective search space used: 1702129488
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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