Clone Name | rbastl16g02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AMDR_EMENI (P15699) Acetamidase regulatory protein | 28 | 6.9 | 2 | CHD6_HUMAN (Q8TD26) Chromodomain-helicase-DNA-binding protein 6 ... | 28 | 9.0 |
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>AMDR_EMENI (P15699) Acetamidase regulatory protein| Length = 765 Score = 28.1 bits (61), Expect = 6.9 Identities = 10/17 (58%), Positives = 15/17 (88%) Frame = -1 Query: 161 ASPTSQPALPPLQPTSE 111 A+P S P++PPLQP+S+ Sbjct: 642 ATPPSAPSIPPLQPSSQ 658
>CHD6_HUMAN (Q8TD26) Chromodomain-helicase-DNA-binding protein 6 (EC 3.6.1.-)| (ATP-dependent helicase CHD6) (CHD-6) (Radiation-induced gene B protein) Length = 2715 Score = 27.7 bits (60), Expect = 9.0 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = +1 Query: 4 EQAHPGEPPFDL 39 ++ HPGEPPFDL Sbjct: 304 QEVHPGEPPFDL 315 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,548,002 Number of Sequences: 219361 Number of extensions: 416519 Number of successful extensions: 1165 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1117 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1165 length of database: 80,573,946 effective HSP length: 29 effective length of database: 74,212,477 effective search space used: 1781099448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)