>RM04_YEAST (P36517) 60S ribosomal protein L4, mitochondrial precursor (YmL4)|
           (MRP-L4)
          Length = 319

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 11/80 (13%)
 Frame = +1

Query: 67  LRDATKFTVANR-----PSNSKRIKSNLTTATKQL----PKPPVDPILSCPNERPIWLF- 216
           LR  TKFT         P +  R  + LT  +  L    P PP    L CP++ P+W F 
Sbjct: 13  LRARTKFTKPKPKQPVLPKDKIRPPTQLTHHSNNLRITEPIPPTTSNLRCPDDHPLWQFF 72

Query: 217 -HLP*INSYGPLPRSAHPIP 273
            +   I S   LP S+H  P
Sbjct: 73  SNKKFIRSADDLPPSSHIRP 92

>SID2_USTMA (O43103) Ferrichrome siderophore peptide synthetase (EC 6.-.-.-)|
          Length = 3947

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -3

Query: 126 FYSFGIGGTICNCKLGGVSQ 67
           FY++G+GGTIC+C  G + Q
Sbjct: 478 FYTWGLGGTICSCPRGVLLQ 497

>COAT_MUMIV (P03137) Coat protein VP1 [Contains: Coat protein VP2]|
          Length = 716

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +3

Query: 195 RKAHLVISPPLNQFLRPITPVGPSNSIFF 281
           + A LV+ PPLN  L    P+G  N I F
Sbjct: 544 QSAPLVVPPPLNGILTNANPIGTKNDIHF 572

>COAT_MUMIM (P07302) Coat protein VP1 [Contains: Coat protein VP2]|
          Length = 718

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +3

Query: 195 RKAHLVISPPLNQFLRPITPVGPSNSIFF 281
           + A LV+ PPLN  L    P+G  N I F
Sbjct: 546 QSAPLVVPPPLNGILTNANPIGTKNDIHF 574

>Y485_PSEAE (Q9I633) Hypothetical protein PA0485|
          Length = 298

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +2

Query: 161 SLPWIQFFLVPTKGPFGYFTSLKSIPTAHYPGRPIQFHLFFPLS 292
           SLPW+   L  T G +G     K  P A  PG  ++  L  PL+
Sbjct: 149 SLPWVSLVLALTFGFYGLIR--KKAPVAALPGLVVETWLLLPLA 190

>YE45_SCHPO (O13965) Hypothetical protein C24C9.05c in chromosome I|
          Length = 730

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +1

Query: 103 PSNSKRIKSNLTTATKQLPKPPV 171
           PSN+++ +S    + +QLPKPPV
Sbjct: 434 PSNTQQSESTYEYSARQLPKPPV 456

>Y34F_DROME (Q9W5D0) Hypothetical protein CG12467 in chromosome 1|
          Length = 1561

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = +1

Query: 61  EHLRDATKFTVANRPSNSKRIKSNLTTATKQLPKPPVDPILSCPNERPIWLFHLP*INSY 240
           EH+ D+     +    ++ + ++ LT A     + P   ILS   ER  WL+HL  ++  
Sbjct: 811 EHVSDSD----SEEREDAAQDQARLTVAIYPAHQGPTYLILSGKPERDNWLYHLTVVSGG 866

Query: 241 GP 246
           GP
Sbjct: 867 GP 868

>COFA1_MOUSE (O35206) Collagen alpha-1(XV) chain precursor [Contains: Endostatin|
            (Endostatin-XV)]
          Length = 1367

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +1

Query: 157  PKPPVDPILSCPNERPIWLFHLP*INS 237
            P+PP++PILS   ERP+   HL  +N+
Sbjct: 1180 PQPPLNPILSANYERPV--LHLVALNT 1204

>YTDK_CAEEL (Q19532) Hypothetical protein F17H10.3 in chromosome X|
          Length = 540

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +1

Query: 58  NEHLRDATKFTVANRPSNSKRIKSNLTTATKQLPKPPVDPILSCPNE 198
           +E L +    T+  +    K  K N    +++LP+ P  PI+   NE
Sbjct: 452 SEILYEHNNMTIEQQVMKEKHSKGNYVEKSEKLPRDPKKPIIVLKNE 498


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,356,112
Number of Sequences: 219361
Number of extensions: 954154
Number of successful extensions: 2634
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2633
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)