>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05,
             complete sequence
          Length = 145044

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 102   caacccatccatatctgcaaaca 124
             |||||||||||||||||||||||
Sbjct: 27356 caacccatccatatctgcaaaca 27334

>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0059G01,
              complete sequence
          Length = 141661

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 102    caacccatccatatctgcaaaca 124
              |||||||||||||||||||||||
Sbjct: 136883 caacccatccatatctgcaaaca 136861

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 102     caacccatccatatctgcaaaca 124
               |||||||||||||||||||||||
Sbjct: 3149639 caacccatccatatctgcaaaca 3149617

>dbj|AK064328.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F08, full
            insert sequence
          Length = 1904

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 102  caacccatccatatctgcaaaca 124
            |||||||||||||||||||||||
Sbjct: 1756 caacccatccatatctgcaaaca 1734

>gb|AC149676.2| Bos taurus  BAC CH240-43C16 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 168416

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 3     ccacacacacattttcatttg 23
             |||||||||||||||||||||
Sbjct: 12054 ccacacacacattttcatttg 12074

>gb|AC150881.4| Bos taurus  BAC CH240-354J15 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 174996

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 3      ccacacacacattttcatttg 23
              |||||||||||||||||||||
Sbjct: 100203 ccacacacacattttcatttg 100223

>gb|AC117615.11| Mus musculus chromosome 19, clone RP23-110D20, complete sequence
          Length = 191809

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     cacacacacattttcatttgt 24
             |||||||||||||||||||||
Sbjct: 87097 cacacacacattttcatttgt 87077

>gb|AC161508.4| Mus musculus chromosome 1, clone RP23-95L22, complete sequence
          Length = 126735

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     cacacacacattttcatttgt 24
             |||||||||||||||||||||
Sbjct: 46793 cacacacacattttcatttgt 46773

>emb|AL592464.24| Human DNA sequence from clone RP11-740P5 on chromosome 1, complete
             sequence
          Length = 120028

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 83    catgagccactgcaaaaatca 103
             |||||||||||||||||||||
Sbjct: 24065 catgagccactgcaaaaatca 24045

>gb|AC020709.4|AC020709 Homo sapiens clone RP11-425F18, complete sequence
          Length = 184104

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 83    catgagccactgcaaaaatca 103
             |||||||||||||||||||||
Sbjct: 14270 catgagccactgcaaaaatca 14250

>gb|AC079790.6| Homo sapiens BAC clone RP11-484E6 from 2, complete sequence
          Length = 161723

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 4     cacacacacattttcatttgt 24
             |||||||||||||||||||||
Sbjct: 80504 cacacacacattttcatttgt 80524

>emb|AL365322.10| Mouse DNA sequence from clone RP23-282D4 on chromosome 1, complete
              sequence
          Length = 259487

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 4      cacacacacattttcatttgt 24
              |||||||||||||||||||||
Sbjct: 253397 cacacacacattttcatttgt 253417

>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     agtacatgagccactgcaaa 98
              ||||||||||||||||||||
Sbjct: 154719 agtacatgagccactgcaaa 154738

>gb|DQ481664.1| Takifugu rubripes HoxAb gene cluster, complete sequence
          Length = 163052

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     acattttcatttgtcatcaa 30
              ||||||||||||||||||||
Sbjct: 114635 acattttcatttgtcatcaa 114616

>gb|AF268619.5| Homo sapiens chromosome 8 clone RP11-122C21 map q21.3, complete sequence
          Length = 151277

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     cagtaaagaatacaacaata 59
              ||||||||||||||||||||
Sbjct: 133411 cagtaaagaatacaacaata 133430

>gb|AF181450.5| Homo sapiens chromosome 8 clone GS1-5L10 map q21.3, complete sequence
          Length = 123088

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 40   cagtaaagaatacaacaata 59
            ||||||||||||||||||||
Sbjct: 5199 cagtaaagaatacaacaata 5218

>gb|AC137546.33| Medicago truncatula clone mth2-24g3, complete sequence
          Length = 123291

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 142    tcctcataccaaggaaaatggcat 165
              ||||||||||||| ||||||||||
Sbjct: 101045 tcctcataccaagaaaaatggcat 101022

>emb|AL157826.8| Human DNA sequence from clone RP11-176P17 on chromosome 9p22.3-24.1
              Contains part of a variant of the PTPRD gene for protein
              tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD),
              complete sequence
          Length = 149087

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    catatctgcaaacagttaca 130
              ||||||||||||||||||||
Sbjct: 128125 catatctgcaaacagttaca 128106

>gb|AC103680.2| Homo sapiens chromosome 8, clone RP11-122C21, complete sequence
          Length = 151281

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     cagtaaagaatacaacaata 59
              ||||||||||||||||||||
Sbjct: 133413 cagtaaagaatacaacaata 133432

>gb|AC158504.10| Medicago truncatula clone mth2-151m4, complete sequence
          Length = 117136

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 142 tcctcataccaaggaaaatggcat 165
           ||||||||||||| ||||||||||
Sbjct: 753 tcctcataccaagaaaaatggcat 730

>emb|CR601492.1| full-length cDNA clone CS0DF022YM20 of Fetal brain of Homo sapiens
            (human)
          Length = 1209

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 40   cagtaaagaatacaacaata 59
            ||||||||||||||||||||
Sbjct: 1186 cagtaaagaatacaacaata 1167

>gb|AF198490.1|AF198490 Homo sapiens 8q22.1 region and MTG8 (CBFA2T1) gene, partial cds
          Length = 32885

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 40   cagtaaagaatacaacaata 59
            ||||||||||||||||||||
Sbjct: 5108 cagtaaagaatacaacaata 5089

>gb|AC115978.23| Mus musculus chromosome 14, clone RP24-83J8, complete sequence
          Length = 200865

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     cacacacacattttcatttg 23
             ||||||||||||||||||||
Sbjct: 40751 cacacacacattttcatttg 40732

>gb|AC018513.5|AC018513 Homo sapiens chromosome 14 clone RP11-58H3 map 14q31, complete sequence
          Length = 190773

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     gtaaagaatacaacaataat 61
              ||||||||||||||||||||
Sbjct: 157652 gtaaagaatacaacaataat 157671

>gb|AC149137.3| Xenopus tropicalis clone CH216-3L19, complete sequence
          Length = 155697

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    cagtaaagaatacaacaata 59
             ||||||||||||||||||||
Sbjct: 34143 cagtaaagaatacaacaata 34162

>gb|AF131817.1|AF131817 Homo sapiens clone 25023 mRNA sequence
          Length = 1466

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 40   cagtaaagaatacaacaata 59
            ||||||||||||||||||||
Sbjct: 1423 cagtaaagaatacaacaata 1404

>gb|AY449458.1| Oikopleura dioica clone BACOIKO002 4xj18, complete sequence
          Length = 188193

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     tttgtcatcaaaaacaatat 39
              ||||||||||||||||||||
Sbjct: 144690 tttgtcatcaaaaacaatat 144709

>gb|AF007942.2| Lates calcarifer tyrosine hydroxylase 1 (TH1) gene, complete cds
          Length = 8984

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 10  cacattttcatttgtcatcaaaaa 33
           |||||||||||| |||||||||||
Sbjct: 953 cacattttcattggtcatcaaaaa 930


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,637,342
Number of Sequences: 3902068
Number of extensions: 3637342
Number of successful extensions: 104423
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104343
Number of HSP's gapped (non-prelim): 80
length of query: 254
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 232
effective length of database: 17,147,199,772
effective search space: 3978150347104
effective search space used: 3978150347104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)