>ref|NM_188031.1| Oryza sativa (japonica cultivar-group), Ozsa8451 predicted mRNA
          Length = 3243

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                        
Query: 62   ctcaaatttcttgtaaacctttcaccaacgggtgacccaaccctcacaaacacggccggg 121
            ||||||||||||  ||||||||| |||||||  |||||||| ||||||||||| ||||||
Sbjct: 3224 ctcaaatttcttacaaacctttctccaacggtcgacccaactctcacaaacacagccggg 3165

                 
Query: 122  cagcc 126
             ||||
Sbjct: 3164 aagcc 3160

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                           
Query: 62      ctcaaatttcttgtaaacctttcaccaacgggtgacccaaccctcacaaacacggccggg 121
               ||||||||||||  ||||||||| |||||||  |||||||| ||||||||||| ||||||
Sbjct: 9252174 ctcaaatttcttacaaacctttctccaacggtcgacccaactctcacaaacacagccggg 9252115

                    
Query: 122     cagcc 126
                ||||
Sbjct: 9252114 aagcc 9252110

>dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0667A10
          Length = 152237

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                         
Query: 62    ctcaaatttcttgtaaacctttcaccaacgggtgacccaaccctcacaaacacggccggg 121
             ||||||||||||  ||||||||| |||||||  |||||||| ||||||||||| ||||||
Sbjct: 28768 ctcaaatttcttacaaacctttctccaacggtcgacccaactctcacaaacacagccggg 28709

                  
Query: 122   cagcc 126
              ||||
Sbjct: 28708 aagcc 28704

>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0011D01
          Length = 168655

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                          
Query: 62     ctcaaatttcttgtaaacctttcaccaacgggtgacccaaccctcacaaacacggccggg 121
              ||||||||||||  ||||||||| |||||||  |||||||| ||||||||||| ||||||
Sbjct: 152556 ctcaaatttcttacaaacctttctccaacggtcgacccaactctcacaaacacagccggg 152497

                   
Query: 122    cagcc 126
               ||||
Sbjct: 152496 aagcc 152492

>gb|DP000042.1| Lemur catta target 106 genomic scaffold
          Length = 452647

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 136   actgacctcggcctcgaaccc 156
             |||||||||||||||||||||
Sbjct: 96911 actgacctcggcctcgaaccc 96931

>gb|AC159318.4| Mus musculus BAC clone RP23-76M13 from chromosome 12, complete sequence
          Length = 269200

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 9      actgtttggttgttgtttccattt 32
              |||||||| |||||||||||||||
Sbjct: 173640 actgtttgcttgttgtttccattt 173663

>gb|DQ224412.1| Xenopus tropicalis alpha globin larval-2 (HBA-L2) gene, complete
           cds
          Length = 3210

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 13  tttggttgttgtttccattt 32
           ||||||||||||||||||||
Sbjct: 220 tttggttgttgtttccattt 239

>gb|AY042184.1| Sugarcane mosaic virus isolate Beijing, complete genome
          Length = 9595

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   aatttcttgtaaacctttca 85
            ||||||||||||||||||||
Sbjct: 4609 aatttcttgtaaacctttca 4590

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 128     acgccggcactgacctcggcctcg 151
               ||||||||| ||||||||||||||
Sbjct: 1636273 acgccggcaatgacctcggcctcg 1636250

>gb|AY149118.1| Sugarcane mosaic virus isolate SCMV-SD, complete genome
          Length = 9596

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   aatttcttgtaaacctttca 85
            ||||||||||||||||||||
Sbjct: 4610 aatttcttgtaaacctttca 4591

>gb|AE011771.1| Xanthomonas axonopodis pv. citri str. 306,  section 149 of 469 of the
            complete genome
          Length = 10193

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 128  acgccggcactgacctcggcctcg 151
            ||||||||| ||||||||||||||
Sbjct: 6437 acgccggcaatgacctcggcctcg 6414

>gb|AC025505.11| Homo sapiens, clone RP11-651N3, complete sequence
          Length = 166426

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 62     ctcaaatttcttgtaaacctttcaccaa 89
              ||||||||||||||| ||| ||||||||
Sbjct: 140546 ctcaaatttcttgtatacccttcaccaa 140573

>gb|AC007485.10| Homo sapiens chromosome 17, clone RP11-257O5, complete sequence
          Length = 164731

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 62    ctcaaatttcttgtaaacctttcaccaa 89
             ||||||||||||||| ||| ||||||||
Sbjct: 26945 ctcaaatttcttgtatacccttcaccaa 26972

>gb|AC147354.2| Xenopus tropicalis clone CH216-29N7, complete sequence
          Length = 179753

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    tttggttgttgtttccattt 32
             ||||||||||||||||||||
Sbjct: 29496 tttggttgttgtttccattt 29477

>gb|AC146868.2| Xenopus tropicalis clone CH216-11K6, complete sequence
          Length = 190329

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    tttggttgttgtttccattt 32
             ||||||||||||||||||||
Sbjct: 67339 tttggttgttgtttccattt 67320

>gb|AC154038.1| Mus musculus 6 BAC RP23-49L8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 213878

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     tttggttgttgtttccattt 32
              ||||||||||||||||||||
Sbjct: 110384 tttggttgttgtttccattt 110403

>gb|AE004901.1| Pseudomonas aeruginosa PAO1, section 462 of 529 of the complete
            genome
          Length = 12399

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 130  gccggcactgacctcggcct 149
            ||||||||||||||||||||
Sbjct: 4365 gccggcactgacctcggcct 4384

>emb|AJ310117.1|SMO310117 Sugarcane mosaic virus partial genomic RNA for polyprotein gene,
            isolate Shandong
          Length = 2014

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   aatttcttgtaaacctttca 85
            ||||||||||||||||||||
Sbjct: 1140 aatttcttgtaaacctttca 1121

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 128     acgccggcactgacctcggcctcg 151
               |||||||||||||||| |||||||
Sbjct: 2270635 acgccggcactgacctgggcctcg 2270612

>gb|AC158608.10| Mus musculus 10 BAC RP24-405N1 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 181588

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    ctgtttggttgttgtttcc 28
             |||||||||||||||||||
Sbjct: 64872 ctgtttggttgttgtttcc 64890

>emb|AL365402.17| Human DNA sequence from clone RP11-445K1 on chromosome 1q31.1-31.3
             Contains the 3' end of the gene for DBCCR1-like (DBCCR1L),
             complete sequence
          Length = 190163

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 20    gttgtttccatttactcgt 38
             |||||||||||||||||||
Sbjct: 80452 gttgtttccatttactcgt 80434

>gb|AC095402.7| Rattus norvegicus 2 BAC CH230-7A22 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 224026

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 10    ctgtttggttgttgtttcc 28
             |||||||||||||||||||
Sbjct: 91874 ctgtttggttgttgtttcc 91856

>gb|AC091588.6| Homo sapiens chromosome 18, clone RP11-627G18, complete sequence
          Length = 165420

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 79    cctttcaccaacgggtgac 97
             |||||||||||||||||||
Sbjct: 88144 cctttcaccaacgggtgac 88126

>emb|AL663083.5| Mouse DNA sequence from clone RP23-280G3 on chromosome 11 Contains the 3'
              end of the gene for a novel protein and the 3' end of a
              novel gene, complete sequence
          Length = 191191

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 60     ctctcaaatttcttgtaaa 78
              |||||||||||||||||||
Sbjct: 155386 ctctcaaatttcttgtaaa 155368

>gb|AC100868.2| Homo sapiens chromosome 8, clone RP11-246K8, complete sequence
          Length = 160939

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 60     ctctcaaatttcttgtaaacctt 82
              |||||||| ||||||||||||||
Sbjct: 160882 ctctcaaaattcttgtaaacctt 160904

>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 64     caaatttcttgtaaacctt 82
              |||||||||||||||||||
Sbjct: 460554 caaatttcttgtaaacctt 460536

>gb|AC011200.9|AC011200 Homo sapiens chromosome 8 clone RP11-71N3, complete sequence
          Length = 161271

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 60    ctctcaaatttcttgtaaacctt 82
             |||||||| ||||||||||||||
Sbjct: 23076 ctctcaaaattcttgtaaacctt 23098

>gb|AC131042.6| Homo sapiens chromosome 8, clone CTD-2607C6, complete sequence
          Length = 152632

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 60     ctctcaaatttcttgtaaacctt 82
              |||||||| ||||||||||||||
Sbjct: 138870 ctctcaaaattcttgtaaacctt 138848

>dbj|AB126330.1| Corbicula japonica gene for ITS2, 28S rRNA, partial sequence,
          country:Japan: central Hokkaido
          Length = 4195

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 1  gaaaaccaactgtttggtt 19
          |||||||||||||||||||
Sbjct: 7  gaaaaccaactgtttggtt 25

>emb|AJ337875.1|HSA337875 Homo sapiens genomic sequence surrounding NotI site, clone NR1-164R
          Length = 1059

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 79  cctttcaccaacgggtgac 97
           |||||||||||||||||||
Sbjct: 591 cctttcaccaacgggtgac 609

>emb|BX004994.6| Zebrafish DNA sequence from clone DKEY-24J15 in linkage group 22,
              complete sequence
          Length = 211945

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 3      aaaccaactgtttggttgt 21
              |||||||||||||||||||
Sbjct: 153808 aaaccaactgtttggttgt 153826

>gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202b12, complete
              sequence
          Length = 230848

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 10     ctgtttggttgttgtttcc 28
              |||||||||||||||||||
Sbjct: 214004 ctgtttggttgttgtttcc 214022


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,425,336
Number of Sequences: 3902068
Number of extensions: 1425336
Number of successful extensions: 96563
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96381
Number of HSP's gapped (non-prelim): 182
length of query: 174
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 152
effective length of database: 17,147,199,772
effective search space: 2606374365344
effective search space used: 2606374365344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)