>EX7L_CHLTR (O84333) Probable exodeoxyribonuclease VII large subunit (EC|
           3.1.11.6) (Exonuclease VII large subunit)
          Length = 516

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/46 (28%), Positives = 27/46 (58%)
 Frame = +1

Query: 58  LYSTVLEGQAYNTRY*SQETENIIQHVTSELHTSQSSLFKTEQSSL 195
           LY++ L+ +  N ++ +Q + NI+  ++  LH + +S  +T Q  L
Sbjct: 381 LYTSCLKNELLNLQHHTQHSRNILSQLSRRLHIAIASSQQTHQECL 426

>LUC7L_MOUSE (Q9CYI4) Putative RNA-binding protein Luc7-like 1|
          Length = 371

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +2

Query: 104 SLKRRKTSYNMSRQSYTRHRALYSKLSRAHCR 199
           S +RRK S + SR  Y RHR+     SR H R
Sbjct: 284 SRERRKFSRSRSRDRYRRHRSRSRSHSRGHRR 315

>PURR_SHIFL (P0ACP9) HTH-type transcriptional repressor purR (Purine nucleotide|
           synthesis repressor)
          Length = 340

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +1

Query: 19  ATKQNVSTVIMMHLYSTVLEGQAYNTRY*SQETENIIQHVTSELHTSQSSLFKT 180
           A + NVST  + H+ +         TR+ ++ET N +     ELH S S++ ++
Sbjct: 7   AKRANVSTTTVSHVIN--------KTRFVAEETRNAVWAAIKELHYSPSAVARS 52

>PURR_SALTY (O68446) HTH-type transcriptional repressor purR (Purine nucleotide|
           synthesis repressor)
          Length = 340

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +1

Query: 19  ATKQNVSTVIMMHLYSTVLEGQAYNTRY*SQETENIIQHVTSELHTSQSSLFKT 180
           A + NVST  + H+ +         TR+ ++ET N +     ELH S S++ ++
Sbjct: 7   AKRANVSTTTVSHVIN--------KTRFVAEETRNAVWAAIKELHYSPSAVARS 52

>PURR_ECOLI (P0ACP7) HTH-type transcriptional repressor purR (Purine nucleotide|
           synthesis repressor)
          Length = 340

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +1

Query: 19  ATKQNVSTVIMMHLYSTVLEGQAYNTRY*SQETENIIQHVTSELHTSQSSLFKT 180
           A + NVST  + H+ +         TR+ ++ET N +     ELH S S++ ++
Sbjct: 7   AKRANVSTTTVSHVIN--------KTRFVAEETRNAVWAAIKELHYSPSAVARS 52

>PURR_ECO57 (P0ACP8) HTH-type transcriptional repressor purR (Purine nucleotide|
           synthesis repressor)
          Length = 340

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +1

Query: 19  ATKQNVSTVIMMHLYSTVLEGQAYNTRY*SQETENIIQHVTSELHTSQSSLFKT 180
           A + NVST  + H+ +         TR+ ++ET N +     ELH S S++ ++
Sbjct: 7   AKRANVSTTTVSHVIN--------KTRFVAEETRNAVWAAIKELHYSPSAVARS 52

>LUC7L_HUMAN (Q9NQ29) Putative RNA-binding protein Luc7-like 1 (SR+89) (Putative|
           SR protein LUC7B1)
          Length = 371

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +2

Query: 104 SLKRRKTSYNMSRQSYTRHRALYSKLSRAHCRFRYANIGRSGRAK 238
           S +RRK S + SR  + RHR+     SR H   R A+  RS + K
Sbjct: 284 SRERRKLSRSRSRDRHRRHRSRSRSHSRGH---RRASRDRSAKYK 325


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,877,676
Number of Sequences: 219361
Number of extensions: 463663
Number of successful extensions: 1230
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1229
length of database: 80,573,946
effective HSP length: 79
effective length of database: 63,244,427
effective search space used: 1517866248
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)