>SDK1_HUMAN (Q7Z5N4) Protein sidekick-1 precursor|
          Length = 2213

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
 Frame = +3

Query: 78   YKVYCPKSTSRLQSKLRSCPTTLPEF*VERKS-TSYVS*R*LTASFHPAGSGPNDKKKQL 254
            YK+Y  ++ S+ +++       LPE  V  K+ TS+       ++F+ AG GP    +Q 
Sbjct: 1737 YKIYYWEADSQNETEKMKV-LFLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPKSDPQQG 1795

Query: 255  YFHLLAVGFINFLAFN 302
              H  A G  +FLAF+
Sbjct: 1796 RTHQAAPGAPSFLAFS 1811

>SDK1_MOUSE (Q3UH53) Protein sidekick-1 precursor|
          Length = 2193

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = +3

Query: 78   YKVYCPKSTSRLQSKLRSCPTTLPEF*VERKS-TSYVS*R*LTASFHPAGSGPNDKKKQL 254
            YKVY  ++ SR +++       LPE  V+ K  TS+       ++F+ AG GP     Q 
Sbjct: 1719 YKVYYWEADSRNETEKMKV-LFLPEPVVKIKDLTSHTKYLISISAFNAAGDGPKSDPCQG 1777

Query: 255  YFHLLAVGFINFLAFN 302
              H  A G  +FLAF+
Sbjct: 1778 RTHQAAPGPPSFLAFS 1793

>FA43B_HUMAN (Q6ZT52) Protein FAM43B|
          Length = 329

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +3

Query: 102 TSRLQSKLRSCPTTLPEF*VER 167
           TS L S LRSCP  LP++ +ER
Sbjct: 30  TSLLSSFLRSCPDLLPDWPLER 51

>PCDGK_HUMAN (Q9UN70) Protocadherin gamma C3 precursor (PCDH-gamma-C3)|
           (Protocadherin 43) (PC-43) (Protocadherin 2)
          Length = 934

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 6/29 (20%)
 Frame = +3

Query: 216 PAGSGPNDKKKQLYFHLL------AVGFI 284
           P+GS P ++KK L F+LL      +VGF+
Sbjct: 678 PSGSAPREQKKNLTFYLLLSLILVSVGFV 706


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,060,114
Number of Sequences: 219361
Number of extensions: 705710
Number of successful extensions: 1714
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1714
length of database: 80,573,946
effective HSP length: 88
effective length of database: 61,270,178
effective search space used: 1470484272
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)