ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl16e11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NKTR_HUMAN (P30414) NK-tumor recognition protein (Natural-killer... 32 0.38
2TDXH_ARCFU (O29969) Probable peroxiredoxin (EC 1.11.1.15) 28 7.2
3ZDH17_MOUSE (Q80TN5) Palmitoyltransferase ZDHHC17 (EC 2.3.1.-) (... 27 9.4
4ZDH17_HUMAN (Q8IUH5) Palmitoyltransferase ZDHHC17 (EC 2.3.1.-) (... 27 9.4

>NKTR_HUMAN (P30414) NK-tumor recognition protein (Natural-killer cells|
           cyclophilin-related protein) (NK-TR protein)
          Length = 1462

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 17/35 (48%), Positives = 19/35 (54%)
 Frame = +1

Query: 19  SSSWSTNRIISDLIICPHPPDIKAERQEKKLKTKK 123
           S SWS N   SDL    H    K  R+EKK+K KK
Sbjct: 406 SRSWSYNGYYSDLSTARHSGHHKKRRKEKKVKHKK 440



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>TDXH_ARCFU (O29969) Probable peroxiredoxin (EC 1.11.1.15)|
          Length = 215

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +1

Query: 22  SSWSTNRIISDLIICPHPPDIKAERQEKKLKTK 120
           ++W  N ++ D +I P PP  +AE +E+  K K
Sbjct: 168 ANWPNNELVGDAVIIP-PPISEAEAKERLEKAK 199



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>ZDH17_MOUSE (Q80TN5) Palmitoyltransferase ZDHHC17 (EC 2.3.1.-) (Zinc finger|
           DHHC domain-containing protein 17) (DHHC-17)
           (Huntingtin-interacting protein 14)
          Length = 632

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 212 PSYLQGKCCGCTRLTANYKHASVGILLCA 298
           PS + G+ C C  L A + H S+   L A
Sbjct: 150 PSLIDGEGCSCIHLAAQFGHTSIVAYLIA 178



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>ZDH17_HUMAN (Q8IUH5) Palmitoyltransferase ZDHHC17 (EC 2.3.1.-) (Zinc finger|
           DHHC domain-containing protein 17) (DHHC-17)
           (Huntingtin-interacting protein 14)
           (Huntingtin-interacting protein 3)
           (Huntingtin-interacting protein HYPH) (Putative
           NF-kappa-B-act
          Length = 632

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 212 PSYLQGKCCGCTRLTANYKHASVGILLCA 298
           PS + G+ C C  L A + H S+   L A
Sbjct: 150 PSLIDGEGCSCIHLAAQFGHTSIVAYLIA 178


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,839,952
Number of Sequences: 219361
Number of extensions: 733795
Number of successful extensions: 1439
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1439
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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