>gb|AC126783.33| Medicago truncatula clone mth2-15k17, complete sequence
          Length = 117437

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 223   gcaagcagcacagcacagcaca 244
             ||||||||||||||||||||||
Sbjct: 27034 gcaagcagcacagcacagcaca 27055

>gb|AC114917.2| Mus musculus chromosome 8 clone RP23-84K6, complete sequence
          Length = 181442

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 3     gtggatggagggctctttcca 23
             |||||||||||||||||||||
Sbjct: 48098 gtggatggagggctctttcca 48118

>gb|AC162523.9| Mus musculus chromosome 8, clone RP23-370L21, complete sequence
          Length = 193777

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 215    aggaccttgcaagcagcacag 235
              |||||||||||||||||||||
Sbjct: 184822 aggaccttgcaagcagcacag 184802

>gb|AC167707.2| Reniera sp. JGI-2005 clone JGIBAYC-9L12, complete sequence
          Length = 40570

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 286   caaaaccaaccaaaagccaca 306
             |||||||||||||||||||||
Sbjct: 12679 caaaaccaaccaaaagccaca 12659

>gb|AC123616.11| Mus musculus chromosome 8, clone RP23-4F1, complete sequence
          Length = 228851

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 215    aggaccttgcaagcagcacag 235
              |||||||||||||||||||||
Sbjct: 108739 aggaccttgcaagcagcacag 108759

>gb|AC127551.7| Mus musculus BAC clone RP24-547H23 from chromosome 8, complete sequence
          Length = 204342

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 215    aggaccttgcaagcagcacag 235
              |||||||||||||||||||||
Sbjct: 202779 aggaccttgcaagcagcacag 202799

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 225      aagcagcacagcacagcacac 245
                |||||||||||||||||||||
Sbjct: 20452453 aagcagcacagcacagcacac 20452473



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 225      aagcagcacagcacagcaca 244
                ||||||||||||||||||||
Sbjct: 21854019 aagcagcacagcacagcaca 21854038

>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0456B03
          Length = 152973

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 225   aagcagcacagcacagcacac 245
             |||||||||||||||||||||
Sbjct: 83083 aagcagcacagcacagcacac 83103

>emb|AL591003.16| Mouse DNA sequence from clone RP23-354I24 on chromosome 13, complete
              sequence
          Length = 221647

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 3      gtggatggagggctctttcca 23
              |||||||||||||||||||||
Sbjct: 216987 gtggatggagggctctttcca 217007

>gb|AC166746.7| Mus musculus chromosome 19, clone RP24-248H10, complete sequence
          Length = 156084

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   agcagcacagcacagcacac 245
             ||||||||||||||||||||
Sbjct: 32602 agcagcacagcacagcacac 32583

>gb|AC144768.2| Mus musculus BAC clone RP23-24K24 from chromosome 7, complete sequence
          Length = 230675

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 225    aagcagcacagcacagcaca 244
              ||||||||||||||||||||
Sbjct: 185816 aagcagcacagcacagcaca 185835

>gb|AC107663.10| Mus musculus chromosome 13, clone RP23-99G9, complete sequence
          Length = 213163

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 165    gagaaaaaccatacacatat 184
              ||||||||||||||||||||
Sbjct: 195026 gagaaaaaccatacacatat 195045

>gb|AC087801.69| Mus musculus strain C57BL/6J clone rp23-396i23 map 1, complete sequence
          Length = 197679

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    ccttccaaaacatacccagg 130
              ||||||||||||||||||||
Sbjct: 172430 ccttccaaaacatacccagg 172411

>gb|AC104100.6| Mus musculus BAC clone RP24-374D12 from chromosome 7, complete sequence
          Length = 139125

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   aagcagcacagcacagcaca 244
             ||||||||||||||||||||
Sbjct: 91892 aagcagcacagcacagcaca 91873

>emb|CR381676.9| Zebrafish DNA sequence from clone CH211-11J2 in linkage group 7,
             complete sequence
          Length = 200769

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    tttgtttcagcaatcttcaa 44
             ||||||||||||||||||||
Sbjct: 95793 tttgtttcagcaatcttcaa 95774

>gb|AC091708.2| Gallus gallus clone XXbac-68C5, complete sequence
          Length = 124309

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 53   ctagacatataggtaacatataat 76
            ||||||||||||| ||||||||||
Sbjct: 5808 ctagacatataggaaacatataat 5831

>gb|AC163701.4| Gallus gallus BAC clone CH261-117C7 from chromosome unknown, complete
              sequence
          Length = 239874

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 53     ctagacatataggtaacatataat 76
              ||||||||||||| ||||||||||
Sbjct: 214468 ctagacatataggaaacatataat 214445

>dbj|AK030732.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:5730424L04 product:hypothetical
           Ubiquitin carboxyl-terminal hydrolase family 2
           containing protein, full insert sequence
          Length = 2337

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 111 ccttccaaaacatacccagg 130
           ||||||||||||||||||||
Sbjct: 213 ccttccaaaacatacccagg 194

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 228      cagcacagcacagcacactc 247
                ||||||||||||||||||||
Sbjct: 29562271 cagcacagcacagcacactc 29562252

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 226     agcagcacagcacagcacac 245
               ||||||||||||||||||||
Sbjct: 5079827 agcagcacagcacagcacac 5079808

>dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0453H10
          Length = 133464

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   agcagcacagcacagcacac 245
             ||||||||||||||||||||
Sbjct: 40325 agcagcacagcacagcacac 40306

>dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0627E10
          Length = 163388

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   cagcacagcacagcacactc 247
             ||||||||||||||||||||
Sbjct: 88943 cagcacagcacagcacactc 88924

>dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0429B05
          Length = 155024

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 225    aagcagcacagcacagcaca 244
              ||||||||||||||||||||
Sbjct: 133602 aagcagcacagcacagcaca 133621

>dbj|AP004558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0409A07
          Length = 146663

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   aagcagcacagcacagcaca 244
             ||||||||||||||||||||
Sbjct: 54688 aagcagcacagcacagcaca 54707

>gb|AC110576.12| Mus musculus chromosome 8, clone RP23-329K17, complete sequence
          Length = 224141

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 257    acaaacgaaagaatgaccta 276
              ||||||||||||||||||||
Sbjct: 113991 acaaacgaaagaatgaccta 113972

>emb|CR974440.6| Zebrafish DNA sequence from clone CH73-78M16 in linkage group 22,
             complete sequence
          Length = 123466

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   agcagcacagcacagcacac 245
             ||||||||||||||||||||
Sbjct: 90010 agcagcacagcacagcacac 90029

>gb|AC151001.2| Mus musculus BAC clone RP23-45M16 from 7, complete sequence
          Length = 176698

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   aagcagcacagcacagcaca 244
             ||||||||||||||||||||
Sbjct: 51600 aagcagcacagcacagcaca 51581

>dbj|AB066524.1| Macaca fascicularis brain cDNA clone:QmoA-11085, full insert
           sequence
          Length = 1776

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 161 aaccgagaaaaaccatacac 180
           ||||||||||||||||||||
Sbjct: 129 aaccgagaaaaaccatacac 110


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,105,005
Number of Sequences: 3902068
Number of extensions: 3105005
Number of successful extensions: 72612
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72501
Number of HSP's gapped (non-prelim): 111
length of query: 338
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 316
effective length of database: 17,147,199,772
effective search space: 5418515127952
effective search space used: 5418515127952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)