ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl16e07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 0.38
2gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genom... 42 0.38
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.38
4gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genom... 42 0.38
5gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, com... 40 1.5
6gb|AC024877.2| Caenorhabditis elegans cosmid Y95B8A, complete se... 40 1.5
7gb|AC160464.3| Mus musculus chromosome 7, clone RP23-256J14, com... 40 1.5
8emb|AL009028.1|HS164L12 Human DNA sequence from clone RP1-164L12... 40 1.5
9gb|AC087292.14| Homo sapiens chromosome 17, clone RP11-810M2, co... 40 1.5
10gb|AC067815.5| Homo sapiens, clone RP11-459C13, complete sequence 40 1.5
11gb|AC098679.3| Homo sapiens BAC clone RP11-597D13 from 4, comple... 40 1.5
12gb|AC020899.6| Homo sapiens chromosome 5 clone CTC-484M2, comple... 40 1.5
13dbj|AB010695.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 1.5
14gb|AY104086.1| Zea mays PCO095808 mRNA sequence 40 1.5
15gb|U38786.1|TVU38786 Trichomonas vaginalis calmodulin (CAM) and ... 40 1.5
16gb|AC102778.8| Mus musculus chromosome 3, clone RP23-19M24, comp... 38 6.0
17gb|AC118018.20| Mus musculus chromosome 17, clone RP23-458D20, c... 38 6.0
18gb|AC154431.2| Mus musculus BAC clone RP23-174B22 from chromosom... 38 6.0
19gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome... 38 6.0
20gb|AC147990.3| Mus musculus BAC clone RP24-396B13 from chromosom... 38 6.0
21gb|AC163494.3| Mus musculus chromosome 7, clone RP23-221O21, com... 38 6.0
22gb|AC101818.9| Mus musculus chromosome 7, clone RP24-363I8, comp... 38 6.0
23gb|AC139576.3| Mus musculus BAC clone RP23-364L23 from chromosom... 38 6.0
24emb|CR847906.11| Zebrafish DNA sequence from clone DKEYP-4C4 in ... 38 6.0
25gb|AC122872.3| Mus musculus BAC clone RP23-110E8 from 1, complet... 38 6.0
26gb|AC121864.1| Mus musculus BAC clone RP24-111L8 from 17, comple... 38 6.0
27gb|AC164403.5| Mus musculus chromosome 7, clone RP23-477O13, com... 38 6.0
28gb|AC111145.7| Mus musculus chromosome 1, clone RP23-373L1, comp... 38 6.0
29gb|AC142328.1| Pan troglodytes BAC clone RP43-24E4 from 7, compl... 38 6.0
30gb|AC115051.6| Mus musculus chromosome 1, clone RP24-340A23, com... 38 6.0
31emb|AL031684.14|HS917N8 Human DNA sequence from clone RP5-917N8 ... 38 6.0
32emb|BX511066.9| Zebrafish DNA sequence from clone CH211-129P6 in... 38 6.0
33emb|CR354424.7| Zebrafish DNA sequence from clone CH211-125L9 in... 38 6.0
34emb|BX649417.8| Zebrafish DNA sequence from clone CH211-227P7 in... 38 6.0
35emb|BX511065.4| Zebrafish DNA sequence from clone DKEY-32I16 in ... 38 6.0
36gb|AC120349.5| Homo sapiens chromosome 18, clone RP11-380M21, co... 38 6.0
37dbj|AB220505.1| Macaca fascicularis mRNA, clone QnpA-14742: simi... 38 6.0
38gb|AC109821.5| Homo sapiens BAC clone RP11-509D19 from 4, comple... 38 6.0
39gb|AC153845.10| Mus musculus 10 BAC RP23-158C15 (Roswell Park Ca... 38 6.0
40emb|BX539325.9| Zebrafish DNA sequence from clone CH211-253B18 i... 38 6.0
41dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 38 6.0
42gb|AC034150.6| Homo sapiens BAC clone RP11-167N19 from 4, comple... 38 6.0
43gb|AC153525.12| Mus musculus 10 BAC RP23-440I21 (Roswell Park Ca... 38 6.0
44emb|AL162451.16| Human DNA sequence from clone RP11-145C1, compl... 38 6.0
45dbj|BS000121.1| Pan troglodytes chromosome 22 clone:RP43-058I16,... 38 6.0
46emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 38 6.0
47emb|BX936282.10| Zebrafish DNA sequence from clone DKEY-202N8 in... 38 6.0
48emb|AL138499.4|CNS01DWU Human chromosome 14 DNA sequence BAC R-1... 38 6.0
49dbj|AP001728.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 38 6.0
50dbj|AP000852.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 38 6.0
51dbj|AP001432.2| Homo sapiens genomic DNA, chromosome 21q, clone:... 38 6.0
52gb|AC174459.2| Mus musculus BAC clone RP23-358J23 from chromosom... 38 6.0
53gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 38 6.0
54gb|AC130723.4| Mus musculus BAC clone RP24-409P7 from 8, complet... 38 6.0
55gb|AC137516.3| Mus musculus BAC clone RP23-259P18 from 1, comple... 38 6.0
56emb|AL672180.11| Mouse DNA sequence from clone RP23-419G22 on ch... 38 6.0
57dbj|AP000151.1| Homo sapiens genomic DNA, chromosome 21q22.2, DS... 38 6.0
58dbj|AP000010.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrom... 38 6.0 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 95       gaagaagcaaacacaagacag 115
                |||||||||||||||||||||
Sbjct: 34614685 gaagaagcaaacacaagacag 34614705
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>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete
             sequence
          Length = 164236

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 95    gaagaagcaaacacaagacag 115
             |||||||||||||||||||||
Sbjct: 72402 gaagaagcaaacacaagacag 72422
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 95       gaagaagcaaacacaagacag 115
                |||||||||||||||||||||
Sbjct: 34704757 gaagaagcaaacacaagacag 34704777
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>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence, complete
             sequence
          Length = 129302

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 95    gaagaagcaaacacaagacag 115
             |||||||||||||||||||||
Sbjct: 28648 gaagaagcaaacacaagacag 28628
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>gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, complete sequence
          Length = 248540

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     ctcacgcatgtatgcatatc 34
              ||||||||||||||||||||
Sbjct: 227811 ctcacgcatgtatgcatatc 227792
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>gb|AC024877.2| Caenorhabditis elegans cosmid Y95B8A, complete sequence
          Length = 104970

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 71    tcaacactgccaccactcacacaa 94
             |||| |||||||||||||||||||
Sbjct: 92222 tcaaaactgccaccactcacacaa 92199
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>gb|AC160464.3| Mus musculus chromosome 7, clone RP23-256J14, complete sequence
          Length = 175716

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     ctcacgcatgtatgcatatc 34
              ||||||||||||||||||||
Sbjct: 157407 ctcacgcatgtatgcatatc 157426
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>emb|AL009028.1|HS164L12 Human DNA sequence from clone RP1-164L12 on chromosome Xq13.1-21.2
             Contains the 5' end of the ITM2A gene for integral
             membrane protein 2A, complete sequence
          Length = 135090

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 96    aagaagcaaacacaagacagactg 119
             |||||||||||| |||||||||||
Sbjct: 84118 aagaagcaaacagaagacagactg 84095
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>gb|AC087292.14| Homo sapiens chromosome 17, clone RP11-810M2, complete sequence
          Length = 195144

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 88    cacacaagaagaagcaaacacaagacag 115
             |||||||||||||||  |||||||||||
Sbjct: 62973 cacacaagaagaagctcacacaagacag 63000
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>gb|AC067815.5| Homo sapiens, clone RP11-459C13, complete sequence
          Length = 111370

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 88     cacacaagaagaagcaaacacaagacag 115
              |||||||||||||||  |||||||||||
Sbjct: 109556 cacacaagaagaagctcacacaagacag 109583
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>gb|AC098679.3| Homo sapiens BAC clone RP11-597D13 from 4, complete sequence
          Length = 188513

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 77     ctgccaccactcacacaagaagaa 100
              ||||||| ||||||||||||||||
Sbjct: 169406 ctgccacaactcacacaagaagaa 169383
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>gb|AC020899.6| Homo sapiens chromosome 5 clone CTC-484M2, complete sequence
          Length = 164286

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    tgccaccactcacacaagaa 97
             ||||||||||||||||||||
Sbjct: 91335 tgccaccactcacacaagaa 91354
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>dbj|AB010695.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDK4
          Length = 78596

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    tatgcatatcaatctcacaa 44
             ||||||||||||||||||||
Sbjct: 68928 tatgcatatcaatctcacaa 68909
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>gb|AY104086.1| Zea mays PCO095808 mRNA sequence
          Length = 1163

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  cacaagaagaagcaaacaca 109
           ||||||||||||||||||||
Sbjct: 604 cacaagaagaagcaaacaca 623
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>gb|U38786.1|TVU38786 Trichomonas vaginalis calmodulin (CAM) and E2 ubiquitin-conjugating
           enzyme (TvUBC1) genes, partial cds
          Length = 1252

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  accactcacacaagaagaag 101
           ||||||||||||||||||||
Sbjct: 302 accactcacacaagaagaag 321
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>gb|AC102778.8| Mus musculus chromosome 3, clone RP23-19M24, complete sequence
          Length = 179555

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 91     acaagaagaagcaaacaca 109
              |||||||||||||||||||
Sbjct: 170876 acaagaagaagcaaacaca 170858
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>gb|AC118018.20| Mus musculus chromosome 17, clone RP23-458D20, complete sequence
          Length = 182043

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 91    acaagaagaagcaaacaca 109
             |||||||||||||||||||
Sbjct: 47795 acaagaagaagcaaacaca 47813
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>gb|AC154431.2| Mus musculus BAC clone RP23-174B22 from chromosome 13, complete sequence
          Length = 195030

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 91     acaagaagaagcaaacaca 109
              |||||||||||||||||||
Sbjct: 191683 acaagaagaagcaaacaca 191701
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>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0052H02, complete sequence
          Length = 159632

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    gcatgtatgcatatcaatc 38
             |||||||||||||||||||
Sbjct: 64393 gcatgtatgcatatcaatc 64411
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>gb|AC147990.3| Mus musculus BAC clone RP24-396B13 from chromosome 17, complete
             sequence
          Length = 145085

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 91    acaagaagaagcaaacaca 109
             |||||||||||||||||||
Sbjct: 59244 acaagaagaagcaaacaca 59262
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>gb|AC163494.3| Mus musculus chromosome 7, clone RP23-221O21, complete sequence
          Length = 193210

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 91    acaagaagaagcaaacaca 109
             |||||||||||||||||||
Sbjct: 37515 acaagaagaagcaaacaca 37533
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>gb|AC101818.9| Mus musculus chromosome 7, clone RP24-363I8, complete sequence
          Length = 137430

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 91     acaagaagaagcaaacaca 109
              |||||||||||||||||||
Sbjct: 107162 acaagaagaagcaaacaca 107144
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>gb|AC139576.3| Mus musculus BAC clone RP23-364L23 from chromosome 7, complete sequence
          Length = 152489

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 91     acaagaagaagcaaacaca 109
              |||||||||||||||||||
Sbjct: 142899 acaagaagaagcaaacaca 142917
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>emb|CR847906.11| Zebrafish DNA sequence from clone DKEYP-4C4 in linkage group 6, complete
              sequence
          Length = 198346

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 44     atgcatgtagatggagcaa 62
              |||||||||||||||||||
Sbjct: 139214 atgcatgtagatggagcaa 139196
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>gb|AC122872.3| Mus musculus BAC clone RP23-110E8 from 1, complete sequence
          Length = 190644

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 91    acaagaagaagcaaacaca 109
             |||||||||||||||||||
Sbjct: 28100 acaagaagaagcaaacaca 28118
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>gb|AC121864.1| Mus musculus BAC clone RP24-111L8 from 17, complete sequence
          Length = 194372

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 91   acaagaagaagcaaacaca 109
            |||||||||||||||||||
Sbjct: 5666 acaagaagaagcaaacaca 5684
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>gb|AC164403.5| Mus musculus chromosome 7, clone RP23-477O13, complete sequence
          Length = 191303

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 86    ctcacacaagaagaagcaa 104
             |||||||||||||||||||
Sbjct: 43766 ctcacacaagaagaagcaa 43748
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>gb|AC111145.7| Mus musculus chromosome 1, clone RP23-373L1, complete sequence
          Length = 165789

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 91    acaagaagaagcaaacaca 109
             |||||||||||||||||||
Sbjct: 20551 acaagaagaagcaaacaca 20569
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>gb|AC142328.1| Pan troglodytes BAC clone RP43-24E4 from 7, complete sequence
          Length = 192006

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 85     actcacacaagaagaagcaaaca 107
              |||||||||||||||| ||||||
Sbjct: 128866 actcacacaagaagaaacaaaca 128888
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>gb|AC115051.6| Mus musculus chromosome 1, clone RP24-340A23, complete sequence
          Length = 158391

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 91     acaagaagaagcaaacaca 109
              |||||||||||||||||||
Sbjct: 153951 acaagaagaagcaaacaca 153969
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>emb|AL031684.14|HS917N8 Human DNA sequence from clone RP5-917N8 on chromosome 20p11.22-12.1
              Contains STSs and GSSs, complete sequence
          Length = 143712

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 99     aagcaaacacaagacagac 117
              |||||||||||||||||||
Sbjct: 105700 aagcaaacacaagacagac 105682
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>emb|BX511066.9| Zebrafish DNA sequence from clone CH211-129P6 in linkage group 14,
              complete sequence
          Length = 165835

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 44     atgcatgtagatggagcaa 62
              |||||||||||||||||||
Sbjct: 104033 atgcatgtagatggagcaa 104015
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>emb|CR354424.7| Zebrafish DNA sequence from clone CH211-125L9 in linkage group 24,
             complete sequence
          Length = 156999

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 103   aaacacaagacagactgtaaaaa 125
             |||||||||||||||| ||||||
Sbjct: 23114 aaacacaagacagactttaaaaa 23136
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>emb|BX649417.8| Zebrafish DNA sequence from clone CH211-227P7 in linkage group 4 Contains
              a novel gene and three CpG islands, complete sequence
          Length = 174290

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 44     atgcatgtagatggagcaa 62
              |||||||||||||||||||
Sbjct: 116371 atgcatgtagatggagcaa 116389
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>emb|BX511065.4| Zebrafish DNA sequence from clone DKEY-32I16 in linkage group 7,
             complete sequence
          Length = 104505

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 110   agacagactgtaaaaactt 128
             |||||||||||||||||||
Sbjct: 24796 agacagactgtaaaaactt 24778
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>gb|AC120349.5| Homo sapiens chromosome 18, clone RP11-380M21, complete sequence
          Length = 183055

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 109    aagacagactgtaaaaact 127
              |||||||||||||||||||
Sbjct: 127285 aagacagactgtaaaaact 127267
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>dbj|AB220505.1| Macaca fascicularis mRNA, clone QnpA-14742: similar to TBC1 domain
           family member 4, CR749622(DKFZ), AB011175(KIAA),
           NM_014832.1
          Length = 1909

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 38  ctcacaatgcatgtagatg 56
           |||||||||||||||||||
Sbjct: 421 ctcacaatgcatgtagatg 403
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>gb|AC109821.5| Homo sapiens BAC clone RP11-509D19 from 4, complete sequence
          Length = 106123

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 85    actcacacaagaagaagcaaaca 107
             ||||||||||||||||| |||||
Sbjct: 40444 actcacacaagaagaagtaaaca 40422
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>gb|AC153845.10| Mus musculus 10 BAC RP23-158C15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 200830

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 98     gaagcaaacacaagacaga 116
              |||||||||||||||||||
Sbjct: 129728 gaagcaaacacaagacaga 129710
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>emb|BX539325.9| Zebrafish DNA sequence from clone CH211-253B18 in linkage group 3,
              complete sequence
          Length = 183783

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 99     aagcaaacacaagacagactgta 121
              |||||||||||| ||||||||||
Sbjct: 128886 aagcaaacacaaaacagactgta 128864
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 20      gcatgtatgcatatcaatc 38
               |||||||||||||||||||
Sbjct: 2784586 gcatgtatgcatatcaatc 2784604
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>gb|AC034150.6| Homo sapiens BAC clone RP11-167N19 from 4, complete sequence
          Length = 150167

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 96    aagaagcaaacacaagaca 114
             |||||||||||||||||||
Sbjct: 19771 aagaagcaaacacaagaca 19789
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>gb|AC153525.12| Mus musculus 10 BAC RP23-440I21 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 199418

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 95    gaagaagcaaacacaagac 113
             |||||||||||||||||||
Sbjct: 91532 gaagaagcaaacacaagac 91514
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>emb|AL162451.16| Human DNA sequence from clone RP11-145C1, complete sequence
          Length = 156963

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 91    acaagaagaagcaaacaca 109
             |||||||||||||||||||
Sbjct: 87088 acaagaagaagcaaacaca 87070
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>dbj|BS000121.1| Pan troglodytes chromosome 22 clone:RP43-058I16, map 22, complete
             sequences
          Length = 147114

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 107   acaagacagactgtaaaaa 125
             |||||||||||||||||||
Sbjct: 12519 acaagacagactgtaaaaa 12537
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>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib
          Length = 2013089

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 22      atgtatgcatatcaatctc 40
               |||||||||||||||||||
Sbjct: 1842375 atgtatgcatatcaatctc 1842393
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>emb|BX936282.10| Zebrafish DNA sequence from clone DKEY-202N8 in linkage group 4,
             complete sequence
          Length = 37158

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 44    atgcatgtagatggagcaa 62
             |||||||||||||||||||
Sbjct: 18904 atgcatgtagatggagcaa 18922
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>emb|AL138499.4|CNS01DWU Human chromosome 14 DNA sequence BAC R-132J14 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 185713

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 109    aagacagactgtaaaaact 127
              |||||||||||||||||||
Sbjct: 130210 aagacagactgtaaaaact 130192
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>dbj|AP001728.1| Homo sapiens genomic DNA, chromosome 21q, section 72/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 107    acaagacagactgtaaaaa 125
              |||||||||||||||||||
Sbjct: 127339 acaagacagactgtaaaaa 127357
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>dbj|AP000852.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-851M3, complete
              sequence
          Length = 166277

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 98     gaagcaaacacaagacagactgt 120
              |||||||| ||||||||||||||
Sbjct: 161483 gaagcaaaaacaagacagactgt 161505
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>dbj|AP001432.2| Homo sapiens genomic DNA, chromosome 21q, clone:CMP21-T1601, complete
             sequence
          Length = 102247

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 107   acaagacagactgtaaaaa 125
             |||||||||||||||||||
Sbjct: 94734 acaagacagactgtaaaaa 94752
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>gb|AC174459.2| Mus musculus BAC clone RP23-358J23 from chromosome 13, complete sequence
          Length = 229410

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 91     acaagaagaagcaaacaca 109
              |||||||||||||||||||
Sbjct: 187623 acaagaagaagcaaacaca 187605
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 20      gcatgtatgcatatcaatc 38
               |||||||||||||||||||
Sbjct: 2793617 gcatgtatgcatatcaatc 2793635
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>gb|AC130723.4| Mus musculus BAC clone RP24-409P7 from 8, complete sequence
          Length = 197951

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 91    acaagaagaagcaaacaca 109
             |||||||||||||||||||
Sbjct: 56681 acaagaagaagcaaacaca 56663
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>gb|AC137516.3| Mus musculus BAC clone RP23-259P18 from 1, complete sequence
          Length = 162037

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 91    acaagaagaagcaaacaca 109
             |||||||||||||||||||
Sbjct: 28661 acaagaagaagcaaacaca 28643
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>emb|AL672180.11| Mouse DNA sequence from clone RP23-419G22 on chromosome X, complete
              sequence
          Length = 212659

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 51     tagatggagcaaactgagc 69
              |||||||||||||||||||
Sbjct: 158392 tagatggagcaaactgagc 158410
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>dbj|AP000151.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone
             D47-S479, segment 3/16, complete sequence
          Length = 100000

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 107   acaagacagactgtaaaaa 125
             |||||||||||||||||||
Sbjct: 96756 acaagacagactgtaaaaa 96774
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>dbj|AP000010.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 3/13
          Length = 100000

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 107   acaagacagactgtaaaaa 125
             |||||||||||||||||||
Sbjct: 44411 acaagacagactgtaaaaa 44429


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,359,394
Number of Sequences: 3902068
Number of extensions: 1359394
Number of successful extensions: 106186
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105908
Number of HSP's gapped (non-prelim): 278
length of query: 128
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 107
effective length of database: 17,151,101,840
effective search space: 1835167896880
effective search space used: 1835167896880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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