>YLK2_CAEEL (P41950) Hypothetical protein D1044.2 precursor|
          Length = 1090

 Score = 30.8 bits (68), Expect = 0.95
 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
 Frame = +3

Query: 3    RVHTQAFSLF*PAEAEPSSFL-TSSSIPDA--SKESDVQVQQPA*TLHMEPSKPKRPN 167
            + HT   ++  P EA PS F+ T++  P A  + +  + VQQP+  ++ +P K +  N
Sbjct: 884  KAHTTTTTMMIPTEAPPSIFVFTTTQKPRAQSTTQKRIIVQQPSIVVNSQPPKQRNDN 941

>MATN2_HUMAN (O00339) Matrilin-2 precursor|
          Length = 956

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +1

Query: 40  QKQNHLRSSPPAPSPMQAKNQTCRCSNL 123
           QK +H  S+ P+ SP++ K+  C+C NL
Sbjct: 896 QKLSH--STKPSGSPLEEKHDQCKCENL 921

>CASR_BOVIN (P35384) Extracellular calcium-sensing receptor precursor (CaSR)|
            (Parathyroid Cell calcium-sensing receptor)
          Length = 1085

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 14/43 (32%), Positives = 17/43 (39%)
 Frame = +2

Query: 62   PHLQLHPRCKQRIRRAGAATCMNSSHGTIQTQATKHNESDHYT 190
            P  Q  PRCKQ++         + S    Q  A  H  S H T
Sbjct: 961  PQSQQPPRCKQKVIFGSGTVTFSLSFDEPQKTAVAHRNSTHQT 1003

>CHFR_MOUSE (Q810L3) Ubiquitin-protein ligase CHFR (EC 6.3.2.-) (Checkpoint|
           with forkhead and RING finger domains protein)
          Length = 664

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 11/47 (23%)
 Frame = +1

Query: 103 TCRC-----------SNLHELFTWNHPNPSDQTQ*IRSLHARANVTR 210
           TCRC           +NL E +   HP+ S   + +RS+ AR  +T+
Sbjct: 340 TCRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDVRSMDARNKITQ 386

>Y1030_TREPA (O83993) Hypothetical protein TP1030|
          Length = 165

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +1

Query: 64  SPPAPSPMQAKNQTCRCSNL--HELFTWNHPNPSDQT 168
           +P + +P  A+ +T RCS+L  H +FT   P P   T
Sbjct: 62  NPGSSAPAPAQKKTARCSSLPTHFIFTTPPPPPVSST 98

>THCB_RHOER (P43492) Cytochrome P450 116 (EC 1.14.-.-)|
          Length = 436

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +1

Query: 100 QTCRCSNLHE-LFTWNHPNPSDQTQ 171
           +TCR   + + LFTW HP   +QT+
Sbjct: 181 ETCRQYGMQQTLFTWGHPTGDEQTR 205


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,763,599
Number of Sequences: 219361
Number of extensions: 774868
Number of successful extensions: 2136
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2135
length of database: 80,573,946
effective HSP length: 62
effective length of database: 66,973,564
effective search space used: 1607365536
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)